RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 TSPEAR-AS2P59090 65 aa12.05□□□□□ -0.48
PDZRN3-201ENST00000263666 GAGE2BQ13066 116 aa12.05□□□□□ -0.48
PDZRN3-201ENST00000263666 GAGE2EQ4V326 116 aa12.05□□□□□ -0.48
PDZRN3-201ENST00000263666 TMEM61Q8N0U2 210 aa12.05□□□□□ -0.48
PDZRN3-201ENST00000263666 ATP6V0BQ99437 205 aa12.05□□□□□ -0.48
PDZRN3-201ENST00000263666 GAGE2DQ9UEU5 116 aa12.05□□□□□ -0.48
PDZRN3-201ENST00000263666 U3KQE9 123 aa12.05□□□□□ -0.48
PDZRN3-201ENST00000263666 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.04□□□□□ -0.48
PDZRN3-201ENST00000263666 MT-ATP8P03928 68 aa12.04□□□□□ -0.48
PDZRN3-201ENST00000263666 CRYBG3Q68DQ2 2970 aa12.04□□□□□ -0.48
PDZRN3-201ENST00000263666 CUBNO60494 3623 aa12.04□□□□□ -0.48
PDZRN3-201ENST00000263666 MUC4Q99102 2169 aa12.03□□□□□ -0.48
PDZRN3-201ENST00000263666 ATXN8Q156A1 80 aa12.03□□□□□ -0.48
PDZRN3-201ENST00000263666 ZFAND6Q6FIF0 208 aa12.03□□□□□ -0.48
PDZRN3-201ENST00000263666 C20orf203Q8NBC4 194 aa12.03□□□□□ -0.48
PDZRN3-201ENST00000263666 CLEC2BQ92478 149 aa12.03□□□□□ -0.48
PDZRN3-201ENST00000263666 CHCHD5Q9BSY4 110 aa12.03□□□□□ -0.48
PDZRN3-201ENST00000263666 HRNRQ86YZ3 2850 aaPredicted RBP12.03□□□□□ -0.48
PDZRN3-201ENST00000263666 COX8CQ7Z4L0 72 aa12.03□□□□□ -0.48
PDZRN3-201ENST00000263666 CELSR1Q9NYQ6 3014 aa12.02□□□□□ -0.48
PDZRN3-201ENST00000263666 TRGV4A0A0C4DH28 118 aa12.02□□□□□ -0.49
PDZRN3-201ENST00000263666 MORN3Q6PF18 240 aaPredicted RBP12.02□□□□□ -0.49
PDZRN3-201ENST00000263666 RHODO00212 210 aa12.02□□□□□ -0.49
PDZRN3-201ENST00000263666 GAGE7O76087 117 aa12.02□□□□□ -0.49
PDZRN3-201ENST00000263666 GAGE12FP0CL80 117 aa12.02□□□□□ -0.49
PDZRN3-201ENST00000263666 GAGE12GP0CL81 117 aa12.02□□□□□ -0.49
PDZRN3-201ENST00000263666 GAGE12IP0CL82 117 aa12.02□□□□□ -0.49
PDZRN3-201ENST00000263666 IGHV3-30-3P0DP02 117 aa12.02□□□□□ -0.49
PDZRN3-201ENST00000263666 RS1O15537 224 aa12.01□□□□□ -0.49
PDZRN3-201ENST00000263666 PLA2G2AP14555 144 aa12.01□□□□□ -0.49
PDZRN3-201ENST00000263666 PSMG3-AS1Q96PY0 264 aa12.01□□□□□ -0.49
PDZRN3-201ENST00000263666 M0QY20 66 aa12.01□□□□□ -0.49
PDZRN3-201ENST00000263666 DEFB130BP0DP73 79 aa12.01□□□□□ -0.49
PDZRN3-201ENST00000263666 DEFB130AP0DP74 79 aa12.01□□□□□ -0.49
PDZRN3-201ENST00000263666 Q6ZSV7 163 aa12.01□□□□□ -0.49
PDZRN3-201ENST00000263666 INSP01308 110 aa12.01□□□□□ -0.49
PDZRN3-201ENST00000263666 IGHV4-31P0DP07 118 aa12.01□□□□□ -0.49
PDZRN3-201ENST00000263666 ELANEP08246 267 aa12□□□□□ -0.49
PDZRN3-201ENST00000263666 TEN1Q86WV5 123 aa12□□□□□ -0.49
PDZRN3-201ENST00000263666 TIMM17AQ99595 171 aa12□□□□□ -0.49
PDZRN3-201ENST00000263666 CFAP46Q8IYW2 2715 aa12□□□□□ -0.49
PDZRN3-201ENST00000263666 TRBV7-9A0A0J9YWB2 115 aa12□□□□□ -0.49
PDZRN3-201ENST00000263666 H3BUA1 57 aa12□□□□□ -0.49
PDZRN3-201ENST00000263666 Q6ZUT4 128 aa12□□□□□ -0.49
PDZRN3-201ENST00000263666 CHD6Q8TD26 2715 aa12□□□□□ -0.49
PDZRN3-201ENST00000263666 A0A096LPF7 62 aa12□□□□□ -0.49
PDZRN3-201ENST00000263666 LEPROTO15243 131 aa12□□□□□ -0.49
PDZRN3-201ENST00000263666 LINC00158P58513 81 aa12□□□□□ -0.49
PDZRN3-201ENST00000263666 Q9H8V8 135 aa12□□□□□ -0.49
PDZRN3-201ENST00000263666 POLR2KP53803 58 aaKnown RBP12□□□□□ -0.49
PDZRN3-201ENST00000263666 RPL36AP83881 106 aaKnown RBP12□□□□□ -0.49
PDZRN3-201ENST00000263666 DCANP1Q8TF63 244 aa12□□□□□ -0.49
PDZRN3-201ENST00000263666 RPL36ALQ969Q0 106 aaKnown RBP12□□□□□ -0.49
PDZRN3-201ENST00000263666 ZNF22P17026 224 aaPredicted RBP11.99□□□□□ -0.49
PDZRN3-201ENST00000263666 TMEM101Q96IK0 257 aa11.99□□□□□ -0.49
PDZRN3-201ENST00000263666 LINC01619G3V211 115 aa11.99□□□□□ -0.49
PDZRN3-201ENST00000263666 IGHV4-4A0A075B6R2 117 aa11.99□□□□□ -0.49
PDZRN3-201ENST00000263666 HTN3P15516 51 aa11.99□□□□□ -0.49
PDZRN3-201ENST00000263666 PFN2P35080 140 aa11.99□□□□□ -0.49
PDZRN3-201ENST00000263666 C3orf56Q8N813 242 aa11.98□□□□□ -0.49
PDZRN3-201ENST00000263666 RHOHQ15669 191 aa11.98□□□□□ -0.49
PDZRN3-201ENST00000263666 IGLV4-3A0A075B6K6 122 aa11.98□□□□□ -0.49
PDZRN3-201ENST00000263666 K7EQG2 157 aa11.98□□□□□ -0.49
PDZRN3-201ENST00000263666 TSHBP01222 138 aa11.98□□□□□ -0.49
PDZRN3-201ENST00000263666 CRYGDP07320 174 aa11.98□□□□□ -0.49
PDZRN3-201ENST00000263666 CLPSL2Q6UWE3 100 aa11.98□□□□□ -0.49
PDZRN3-201ENST00000263666 CARD19Q96LW7 228 aa11.98□□□□□ -0.49
PDZRN3-201ENST00000263666 USP24Q9UPU5 2620 aa11.98□□□□□ -0.49
PDZRN3-201ENST00000263666 CRIP2P52943 208 aaPredicted RBP11.97□□□□□ -0.49
PDZRN3-201ENST00000263666 GAGE6Q13070 117 aa11.97□□□□□ -0.49
PDZRN3-201ENST00000263666 SLC25A29Q8N8R3 303 aa11.97□□□□□ -0.49
PDZRN3-201ENST00000263666 Q9UF83 564 aa11.97□□□□□ -0.49
PDZRN3-201ENST00000263666 NOP10Q9NPE3 64 aaKnown RBP11.97□□□□□ -0.49
PDZRN3-201ENST00000263666 IGLV4-69A0A075B6H9 119 aa11.97□□□□□ -0.49
PDZRN3-201ENST00000263666 TRAV26-1A0A087WT03 109 aa11.97□□□□□ -0.49
PDZRN3-201ENST00000263666 KLLNB2CW77 178 aa11.97□□□□□ -0.49
PDZRN3-201ENST00000263666 DNAL4O96015 105 aa11.97□□□□□ -0.49
PDZRN3-201ENST00000263666 FLNAP21333 2647 aaKnown RBP11.97□□□□□ -0.49
PDZRN3-201ENST00000263666 IGIPA6NJ69 53 aa11.97□□□□□ -0.49
PDZRN3-201ENST00000263666 H3BMM0 161 aa11.97□□□□□ -0.49
PDZRN3-201ENST00000263666 UBE2WQ96B02 151 aa11.97□□□□□ -0.49
PDZRN3-201ENST00000263666 A0A0J9YXY3 114 aa11.96□□□□□ -0.49
PDZRN3-201ENST00000263666 TEX49A0A1B0GTD5 131 aa11.96□□□□□ -0.49
PDZRN3-201ENST00000263666 LRRC75A-AS1Q8N1F1 130 aa11.96□□□□□ -0.49
PDZRN3-201ENST00000263666 PRSS47A8MTI9 375 aa11.96□□□□□ -0.5
PDZRN3-201ENST00000263666 K7EMT4 169 aa11.96□□□□□ -0.5
PDZRN3-201ENST00000263666 SOCS3O14543 225 aa11.95□□□□□ -0.5
PDZRN3-201ENST00000263666 LINC01620Q4KN68 170 aa11.95□□□□□ -0.5
PDZRN3-201ENST00000263666 UTP20O75691 2785 aaKnown RBP11.95□□□□□ -0.5
PDZRN3-201ENST00000263666 IGHV3-30P01768 117 aa11.95□□□□□ -0.5
PDZRN3-201ENST00000263666 IGHV3-30-5P0DP03 117 aa11.95□□□□□ -0.5
PDZRN3-201ENST00000263666 MED14OSP0DP75 135 aa11.95□□□□□ -0.5
PDZRN3-201ENST00000263666 ZNF575Q86XF7 245 aa11.95□□□□□ -0.5
PDZRN3-201ENST00000263666 LINC00467Q9BRT7 94 aa11.95□□□□□ -0.5
PDZRN3-201ENST00000263666 CDKN2A-AS1Q9UH64 79 aa11.95□□□□□ -0.5
PDZRN3-201ENST00000263666 NFE4Q86UQ8 179 aa11.94□□□□□ -0.5
PDZRN3-201ENST00000263666 HELZ2Q9BYK8 2649 aaKnown RBP11.94□□□□□ -0.5
PDZRN3-201ENST00000263666 TRBV27A0A0K0K1C4 114 aa11.94□□□□□ -0.5
PDZRN3-201ENST00000263666 B5MCH6 92 aa11.94□□□□□ -0.5
PDZRN3-201ENST00000263666 NDUFA7O95182 113 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms