RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 DPH3P1Q9H4G8 78 aa10.67□□□□□ -0.7
SCARF1-201ENST00000263071 PAPPA-AS1Q5QFB9 102 aa10.66□□□□□ -0.7
SCARF1-201ENST00000263071 TMEM86BQ8N661 226 aa10.66□□□□□ -0.7
SCARF1-201ENST00000263071 NPC2P61916 151 aa10.65□□□□□ -0.7
SCARF1-201ENST00000263071 CCDC140Q96MF4 163 aa10.65□□□□□ -0.7
SCARF1-201ENST00000263071 SMIM2Q9BVW6 85 aa10.65□□□□□ -0.7
SCARF1-201ENST00000263071 ICOSQ9Y6W8 199 aa10.65□□□□□ -0.7
SCARF1-201ENST00000263071 CXCL5P42830 114 aa10.65□□□□□ -0.7
SCARF1-201ENST00000263071 SERP2Q8N6R1 65 aa10.65□□□□□ -0.7
SCARF1-201ENST00000263071 SMCR5Q8TEV8 140 aa10.65□□□□□ -0.7
SCARF1-201ENST00000263071 ZANQ9Y493 2812 aa10.65□□□□□ -0.7
SCARF1-201ENST00000263071 UTP20O75691 2785 aaKnown RBP10.65□□□□□ -0.7
SCARF1-201ENST00000263071 RNF5Q99942 180 aa10.65□□□□□ -0.71
SCARF1-201ENST00000263071 ABCA2Q9BZC7 2435 aa10.64□□□□□ -0.71
SCARF1-201ENST00000263071 IGHV3-73A0A0B4J1V6 119 aa10.64□□□□□ -0.71
SCARF1-201ENST00000263071 CSMD2Q7Z408 3487 aa10.64□□□□□ -0.71
SCARF1-201ENST00000263071 TRAV12-2A0A075B6T6 113 aa10.64□□□□□ -0.71
SCARF1-201ENST00000263071 UBE2E1P51965 193 aa10.64□□□□□ -0.71
SCARF1-201ENST00000263071 RPL18AQ02543 176 aaKnown RBP10.64□□□□□ -0.71
SCARF1-201ENST00000263071 FLNCQ14315 2725 aa10.64□□□□□ -0.71
SCARF1-201ENST00000263071 A0A1W2PPR1 153 aa10.64□□□□□ -0.71
SCARF1-201ENST00000263071 RPL39P62891 51 aaKnown RBP10.64□□□□□ -0.71
SCARF1-201ENST00000263071 NPBQ8NG41 125 aa10.64□□□□□ -0.71
SCARF1-201ENST00000263071 BRK1Q8WUW1 75 aa10.64□□□□□ -0.71
SCARF1-201ENST00000263071 TOMM6Q96B49 74 aa10.63□□□□□ -0.71
SCARF1-201ENST00000263071 ITPR1Q14643 2758 aa10.63□□□□□ -0.71
SCARF1-201ENST00000263071 HIST2H2BDQ6DRA6 164 aa10.63□□□□□ -0.71
SCARF1-201ENST00000263071 C20orf173Q96LM9 149 aa10.63□□□□□ -0.71
SCARF1-201ENST00000263071 C9orf85Q96MD7 179 aa10.62□□□□□ -0.71
SCARF1-201ENST00000263071 OPRPNQ99935 248 aaPredicted RBP10.62□□□□□ -0.71
SCARF1-201ENST00000263071 TSPEAR-AS2P59090 65 aa10.62□□□□□ -0.71
SCARF1-201ENST00000263071 NOTCH2Q04721 2471 aa10.62□□□□□ -0.71
SCARF1-201ENST00000263071 PIEZO1Q92508 2521 aa10.62□□□□□ -0.71
SCARF1-201ENST00000263071 SUMO2P61956 95 aaKnown RBP10.62□□□□□ -0.71
SCARF1-201ENST00000263071 DEFB121Q5J5C9 76 aa10.62□□□□□ -0.71
SCARF1-201ENST00000263071 NRACQ8N912 160 aa10.62□□□□□ -0.71
SCARF1-201ENST00000263071 LINC01600Q96MT4 127 aa10.62□□□□□ -0.71
SCARF1-201ENST00000263071 EPG5Q9HCE0 2579 aa10.62□□□□□ -0.71
SCARF1-201ENST00000263071 ADARB2-AS1A8MUL3 147 aa10.61□□□□□ -0.71
SCARF1-201ENST00000263071 SDIM1Q6ZPB5 146 aa10.61□□□□□ -0.71
SCARF1-201ENST00000263071 C5orf38Q86SI9 138 aa10.61□□□□□ -0.71
SCARF1-201ENST00000263071 PRORYQ9H606 182 aa10.61□□□□□ -0.71
SCARF1-201ENST00000263071 EIF4EBP3O60516 100 aaPredicted RBP10.61□□□□□ -0.71
SCARF1-201ENST00000263071 CELSR2Q9HCU4 2923 aa10.6□□□□□ -0.71
SCARF1-201ENST00000263071 BLCAPP62952 87 aa10.6□□□□□ -0.71
SCARF1-201ENST00000263071 RNASE13Q5GAN3 156 aaKnown RBP10.6□□□□□ -0.71
SCARF1-201ENST00000263071 SLC50A1Q9BRV3 221 aa10.6□□□□□ -0.71
SCARF1-201ENST00000263071 TRBV7-1A0A0A6YYK4 115 aa10.6□□□□□ -0.71
SCARF1-201ENST00000263071 TMEM223A0PJW6 202 aa10.6□□□□□ -0.71
SCARF1-201ENST00000263071 MAPK1IP1LQ8NDC0 245 aa10.6□□□□□ -0.71
SCARF1-201ENST00000263071 ZFAND3Q9H8U3 227 aa10.6□□□□□ -0.71
SCARF1-201ENST00000263071 MTORP42345 2549 aa10.6□□□□□ -0.71
SCARF1-201ENST00000263071 ADORA2A-AS1P86434 159 aa10.59□□□□□ -0.71
SCARF1-201ENST00000263071 LY6G5BQ8NDX9 201 aa10.59□□□□□ -0.71
SCARF1-201ENST00000263071 CLPSL1A2RUU4 121 aa10.59□□□□□ -0.71
SCARF1-201ENST00000263071 M0R1W7 72 aa10.59□□□□□ -0.71
SCARF1-201ENST00000263071 ZNF575Q86XF7 245 aa10.59□□□□□ -0.71
SCARF1-201ENST00000263071 TMEM243Q9BU79 118 aa10.59□□□□□ -0.71
SCARF1-201ENST00000263071 TP53TG1Q9Y2A0 90 aa10.59□□□□□ -0.71
SCARF1-201ENST00000263071 FN1P02751 2386 aaKnown RBP10.59□□□□□ -0.71
SCARF1-201ENST00000263071 IGKV3D-7A0A0C4DH55 119 aa10.59□□□□□ -0.71
SCARF1-201ENST00000263071 IGHV7-4-1A0A0J9YVY3 117 aa10.59□□□□□ -0.71
SCARF1-201ENST00000263071 KLK9Q9UKQ9 250 aa10.59□□□□□ -0.71
SCARF1-201ENST00000263071 LST1O00453 97 aa10.58□□□□□ -0.72
SCARF1-201ENST00000263071 FAM110DQ8TAY7 271 aaPredicted RBP10.58□□□□□ -0.72
SCARF1-201ENST00000263071 ODF3BA8MYP8 253 aa10.58□□□□□ -0.72
SCARF1-201ENST00000263071 PKD1L2Q7Z442 2459 aa10.58□□□□□ -0.72
SCARF1-201ENST00000263071 H3BUX3 64 aa10.57□□□□□ -0.72
SCARF1-201ENST00000263071 CIRBPQ14011 172 aaKnown RBP10.57□□□□□ -0.72
SCARF1-201ENST00000263071 CNFNQ9BYD5 112 aa10.57□□□□□ -0.72
SCARF1-201ENST00000263071 PRM2P04554 102 aa10.57□□□□□ -0.72
SCARF1-201ENST00000263071 K7ENP7 123 aa10.56□□□□□ -0.72
SCARF1-201ENST00000263071 RHPN1-AS1Q9BWJ2 59 aa10.56□□□□□ -0.72
SCARF1-201ENST00000263071 A0A0U1RRA0 63 aa10.56□□□□□ -0.72
SCARF1-201ENST00000263071 TIMM21Q9BVV7 248 aa10.56□□□□□ -0.72
SCARF1-201ENST00000263071 KNCNA6PVL3 124 aa10.56□□□□□ -0.72
SCARF1-201ENST00000263071 TRAV21A0A0B4J279 112 aa10.55□□□□□ -0.72
SCARF1-201ENST00000263071 KHDC1LQ5JSQ8 128 aa10.55□□□□□ -0.72
SCARF1-201ENST00000263071 SIRPDQ9H106 197 aa10.55□□□□□ -0.72
SCARF1-201ENST00000263071 I3L3M4 83 aa10.55□□□□□ -0.72
SCARF1-201ENST00000263071 C10orf99Q6UWK7 81 aa10.54□□□□□ -0.72
SCARF1-201ENST00000263071 PRRC2AP48634 2157 aaKnown RBP10.54□□□□□ -0.72
SCARF1-201ENST00000263071 A0A1W2PRX2 142 aa10.54□□□□□ -0.72
SCARF1-201ENST00000263071 USP17L23D6RBM5 183 aa10.54□□□□□ -0.72
SCARF1-201ENST00000263071 IGHV4-38-2P0DP08 117 aa10.54□□□□□ -0.72
SCARF1-201ENST00000263071 A0A087WVE0 104 aa10.54□□□□□ -0.72
SCARF1-201ENST00000263071 DAZ2Q13117 558 aaKnown RBP10.54□□□□□ -0.72
SCARF1-201ENST00000263071 Q6ZSV7 163 aa10.54□□□□□ -0.72
SCARF1-201ENST00000263071 DAZ4Q86SG3 579 aaKnown RBP10.54□□□□□ -0.72
SCARF1-201ENST00000263071 DAZ1Q9NQZ3 744 aaKnown RBP10.54□□□□□ -0.72
SCARF1-201ENST00000263071 DAZ3Q9NR90 486 aaKnown RBP10.54□□□□□ -0.72
SCARF1-201ENST00000263071 IGLV4-69A0A075B6H9 119 aa10.53□□□□□ -0.72
SCARF1-201ENST00000263071 HIST1H4AP62805 103 aaKnown RBP10.53□□□□□ -0.72
SCARF1-201ENST00000263071 SPINK13Q1W4C9 94 aa10.53□□□□□ -0.72
SCARF1-201ENST00000263071 IL17DQ8TAD2 202 aa10.53□□□□□ -0.72
SCARF1-201ENST00000263071 MINOS1Q5TGZ0 78 aa10.52□□□□□ -0.72
SCARF1-201ENST00000263071 PRIMA1Q86XR5 153 aa10.52□□□□□ -0.72
SCARF1-201ENST00000263071 FAM223AQ8IWN6 122 aa10.52□□□□□ -0.72
SCARF1-201ENST00000263071 MINOS1-NBL1R4GNA1 71 aa10.52□□□□□ -0.72
SCARF1-201ENST00000263071 NDUFC2O95298 119 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms