RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 TRBV6-5A0A0K0K1A5 114 aa16.88■□□□□ 0.29
SCN1B-201ENST00000262631 BTF3P20290 206 aaKnown RBP16.88■□□□□ 0.29
SCN1B-201ENST00000262631 IGHV3-38A0A0C4DH36 116 aa16.88■□□□□ 0.29
SCN1B-201ENST00000262631 EREGO14944 169 aa16.88■□□□□ 0.29
SCN1B-201ENST00000262631 DEFB104AQ8WTQ1 72 aa16.87■□□□□ 0.29
SCN1B-201ENST00000262631 ALKBH7Q9BT30 221 aaPredicted RBP16.87■□□□□ 0.29
SCN1B-201ENST00000262631 SDHAF1A6NFY7 115 aa16.86■□□□□ 0.29
SCN1B-201ENST00000262631 C3orf84H3BNL1 204 aa16.86■□□□□ 0.29
SCN1B-201ENST00000262631 NEGR1Q7Z3B1 354 aa16.86■□□□□ 0.29
SCN1B-201ENST00000262631 ATP6V0E2Q8NHE4 81 aa16.86■□□□□ 0.29
SCN1B-201ENST00000262631 SNHG12Q9BXW3 62 aa16.86■□□□□ 0.29
SCN1B-201ENST00000262631 ST20Q9HBF5 79 aa16.86■□□□□ 0.29
SCN1B-201ENST00000262631 SCGB1D1O95968 90 aa16.85■□□□□ 0.29
SCN1B-201ENST00000262631 PPP1R17O96001 155 aa16.85■□□□□ 0.29
SCN1B-201ENST00000262631 ESDP10768 282 aa16.85■□□□□ 0.29
SCN1B-201ENST00000262631 SUMO2P61956 95 aaKnown RBP16.85■□□□□ 0.29
SCN1B-201ENST00000262631 TMEM70Q9BUB7 260 aa16.85■□□□□ 0.29
SCN1B-201ENST00000262631 POLR2KP53803 58 aaKnown RBP16.83■□□□□ 0.28
SCN1B-201ENST00000262631 LAMTOR2Q9Y2Q5 125 aa16.83■□□□□ 0.28
SCN1B-201ENST00000262631 ESRGQ1W209 222 aa16.82■□□□□ 0.28
SCN1B-201ENST00000262631 DAZ4Q86SG3 579 aaKnown RBP16.82■□□□□ 0.28
SCN1B-201ENST00000262631 C20orf78Q9BR46 151 aa16.82■□□□□ 0.28
SCN1B-201ENST00000262631 DAZ3Q9NR90 486 aaKnown RBP16.82■□□□□ 0.28
SCN1B-201ENST00000262631 LYPD5Q6UWN5 251 aa16.81■□□□□ 0.28
SCN1B-201ENST00000262631 SH2D6Q7Z4S9 175 aa16.81■□□□□ 0.28
SCN1B-201ENST00000262631 LOC389332A0A1B0GUA5 103 aa16.81■□□□□ 0.28
SCN1B-201ENST00000262631 TCTAP57738 103 aa16.81■□□□□ 0.28
SCN1B-201ENST00000262631 TRBV27A0A0K0K1C4 114 aa16.8■□□□□ 0.28
SCN1B-201ENST00000262631 TEX43Q6ZNM6 134 aa16.8■□□□□ 0.28
SCN1B-201ENST00000262631 GTSF1LQ9H1H1 148 aa16.8■□□□□ 0.28
SCN1B-201ENST00000262631 SMIM2Q9BVW6 85 aa16.79■□□□□ 0.28
SCN1B-201ENST00000262631 NTM-AS1Q6ZSK4 140 aa16.78■□□□□ 0.28
SCN1B-201ENST00000262631 MAP1LC3AQ9H492 121 aa16.78■□□□□ 0.28
SCN1B-201ENST00000262631 PRSS47A8MTI9 375 aa16.78■□□□□ 0.28
SCN1B-201ENST00000262631 MIEN1Q9BRT3 115 aa16.78■□□□□ 0.28
SCN1B-201ENST00000262631 IGLV2-18A0A075B6J9 118 aa16.77■□□□□ 0.28
SCN1B-201ENST00000262631 I3L3M4 83 aa16.77■□□□□ 0.28
SCN1B-201ENST00000262631 VCYO14598 125 aa16.77■□□□□ 0.28
SCN1B-201ENST00000262631 LINC00614P0C842 121 aa16.77■□□□□ 0.28
SCN1B-201ENST00000262631 RPL32P62910 135 aaKnown RBP16.77■□□□□ 0.28
SCN1B-201ENST00000262631 TSHBP01222 138 aa16.76■□□□□ 0.27
SCN1B-201ENST00000262631 PMCHP20382 165 aa16.76■□□□□ 0.27
SCN1B-201ENST00000262631 C18orf32Q8TCD1 76 aa16.76■□□□□ 0.27
SCN1B-201ENST00000262631 LINC00588Q9Y4M8 146 aa16.76■□□□□ 0.27
SCN1B-201ENST00000262631 IFI27P40305 119 aaPredicted RBP16.75■□□□□ 0.27
SCN1B-201ENST00000262631 DLEU1O43261 78 aa16.75■□□□□ 0.27
SCN1B-201ENST00000262631 Q0VG73 95 aa16.75■□□□□ 0.27
SCN1B-201ENST00000262631 TRBV6-8A0A0A6YYG3 113 aa16.74■□□□□ 0.27
SCN1B-201ENST00000262631 TIRAPP58753 221 aa16.74■□□□□ 0.27
SCN1B-201ENST00000262631 COTL1Q14019 142 aa16.74■□□□□ 0.27
SCN1B-201ENST00000262631 ZNF25P17030 456 aaPredicted RBP16.73■□□□□ 0.27
SCN1B-201ENST00000262631 CCL18P55774 89 aa16.72■□□□□ 0.27
SCN1B-201ENST00000262631 KIR2DL4Q99706 377 aa16.72■□□□□ 0.27
SCN1B-201ENST00000262631 LELP1Q5T871 98 aa16.72■□□□□ 0.27
SCN1B-201ENST00000262631 Q8N8P6 123 aa16.72■□□□□ 0.27
SCN1B-201ENST00000262631 VAMP8Q9BV40 100 aa16.72■□□□□ 0.27
SCN1B-201ENST00000262631 CBY1Q9Y3M2 126 aa16.71■□□□□ 0.27
SCN1B-201ENST00000262631 G0S2P27469 103 aa16.7■□□□□ 0.26
SCN1B-201ENST00000262631 PRSS3P2Q8NHM4 247 aa16.7■□□□□ 0.26
SCN1B-201ENST00000262631 NXT2Q9NPJ8 142 aaKnown RBP16.7■□□□□ 0.26
SCN1B-201ENST00000262631 FCER1GP30273 86 aa16.69■□□□□ 0.26
SCN1B-201ENST00000262631 URB1-AS1Q96HZ7 61 aa16.69■□□□□ 0.26
SCN1B-201ENST00000262631 MRPS16Q9Y3D3 137 aaKnown RBP16.69■□□□□ 0.26
SCN1B-201ENST00000262631 DNAH1Q9P2D7 4330 aa16.69■□□□□ 0.26
SCN1B-201ENST00000262631 AMTP48728 403 aa16.69■□□□□ 0.26
SCN1B-201ENST00000262631 TMEM97Q5BJF2 176 aa16.69■□□□□ 0.26
SCN1B-201ENST00000262631 CHCHD7Q9BUK0 85 aa16.69■□□□□ 0.26
SCN1B-201ENST00000262631 TRBV25-1A0A075B6N4 114 aa16.68■□□□□ 0.26
SCN1B-201ENST00000262631 IGHV1-24A0A0C4DH33 117 aa16.68■□□□□ 0.26
SCN1B-201ENST00000262631 WFDC10BQ8IUB3 73 aa16.68■□□□□ 0.26
SCN1B-201ENST00000262631 VPS13DQ5THJ4 4388 aa16.67■□□□□ 0.26
SCN1B-201ENST00000262631 COL5A1-AS1Q5SY13 56 aa16.66■□□□□ 0.26
SCN1B-201ENST00000262631 BAGE3Q86Y29 109 aa16.66■□□□□ 0.26
SCN1B-201ENST00000262631 UBE2DNLQ8IWF7 75 aa16.66■□□□□ 0.26
SCN1B-201ENST00000262631 NUPR1O60356 82 aa16.65■□□□□ 0.26
SCN1B-201ENST00000262631 SERF1AO75920 110 aa16.65■□□□□ 0.26
SCN1B-201ENST00000262631 NIT1Q86X76 327 aa16.65■□□□□ 0.26
SCN1B-201ENST00000262631 Q8N3U1 123 aa16.65■□□□□ 0.26
SCN1B-201ENST00000262631 CHCHD5Q9BSY4 110 aa16.65■□□□□ 0.26
SCN1B-201ENST00000262631 UPK3BQ9BT76 320 aa16.65■□□□□ 0.26
SCN1B-201ENST00000262631 TMEM243Q9BU79 118 aa16.65■□□□□ 0.26
SCN1B-201ENST00000262631 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.64■□□□□ 0.25
SCN1B-201ENST00000262631 IGKV2-29A2NJV5 120 aaPredicted RBP16.64■□□□□ 0.25
SCN1B-201ENST00000262631 LINC01546A6NGU7 62 aa16.64■□□□□ 0.25
SCN1B-201ENST00000262631 LINC00310P59036 64 aa16.64■□□□□ 0.25
SCN1B-201ENST00000262631 FA2HQ7L5A8 372 aa16.64■□□□□ 0.25
SCN1B-201ENST00000262631 TRAV8-6A0A0B4J262 113 aa16.63■□□□□ 0.25
SCN1B-201ENST00000262631 LAGE3Q14657 143 aa16.62■□□□□ 0.25
SCN1B-201ENST00000262631 LGALS9CQ6DKI2 356 aa16.62■□□□□ 0.25
SCN1B-201ENST00000262631 GAGE6Q13070 117 aa16.62■□□□□ 0.25
SCN1B-201ENST00000262631 LINC00476Q8WZB0 136 aa16.62■□□□□ 0.25
SCN1B-201ENST00000262631 RNASEKQ6P5S7 137 aaKnown RBP16.61■□□□□ 0.25
SCN1B-201ENST00000262631 AP5S1Q9NUS5 200 aa16.61■□□□□ 0.25
SCN1B-201ENST00000262631 K7EMI3 77 aa16.6■□□□□ 0.25
SCN1B-201ENST00000262631 RPL39P62891 51 aaKnown RBP16.6■□□□□ 0.25
SCN1B-201ENST00000262631 C20orf203Q8NBC4 194 aa16.6■□□□□ 0.25
SCN1B-201ENST00000262631 UQCR10Q9UDW1 63 aa16.6■□□□□ 0.25
SCN1B-201ENST00000262631 LY6G6CO95867 125 aa16.59■□□□□ 0.25
SCN1B-201ENST00000262631 ORMDL2Q53FV1 153 aa16.59■□□□□ 0.25
SCN1B-201ENST00000262631 Q9H8V8 135 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms