RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 Q9H8V8 135 aa11.88□□□□□ -0.51
PRPF40B-201ENST00000261897 H3BUX3 64 aa11.88□□□□□ -0.51
PRPF40B-201ENST00000261897 BAALC-AS2P0C853 105 aa11.88□□□□□ -0.51
PRPF40B-201ENST00000261897 SNRPD3P62318 126 aaKnown RBP11.88□□□□□ -0.51
PRPF40B-201ENST00000261897 BLCAPP62952 87 aa11.88□□□□□ -0.51
PRPF40B-201ENST00000261897 A0A0B4J2C4 111 aa11.87□□□□□ -0.51
PRPF40B-201ENST00000261897 LINC01546A6NGU7 62 aa11.87□□□□□ -0.51
PRPF40B-201ENST00000261897 POLR2KP53803 58 aaKnown RBP11.87□□□□□ -0.51
PRPF40B-201ENST00000261897 PLA2G2CQ5R387 149 aa11.87□□□□□ -0.51
PRPF40B-201ENST00000261897 hADV29S1A0JD25 119 aa11.87□□□□□ -0.51
PRPF40B-201ENST00000261897 HERVK_113P63121 156 aa11.87□□□□□ -0.51
PRPF40B-201ENST00000261897 C20orf203Q8NBC4 194 aa11.87□□□□□ -0.51
PRPF40B-201ENST00000261897 IGLV4-3A0A075B6K6 122 aa11.86□□□□□ -0.51
PRPF40B-201ENST00000261897 SDIM1Q6ZPB5 146 aa11.86□□□□□ -0.51
PRPF40B-201ENST00000261897 CELSR1Q9NYQ6 3014 aa11.86□□□□□ -0.51
PRPF40B-201ENST00000261897 EIF4EBP3O60516 100 aaPredicted RBP11.86□□□□□ -0.51
PRPF40B-201ENST00000261897 VPREB3Q9UKI3 123 aa11.86□□□□□ -0.51
PRPF40B-201ENST00000261897 MINOS1-NBL1R4GNA1 71 aa11.85□□□□□ -0.51
PRPF40B-201ENST00000261897 CENPVL3A0A0U1RRI6 287 aa11.85□□□□□ -0.51
PRPF40B-201ENST00000261897 DAZ2Q13117 558 aaKnown RBP11.84□□□□□ -0.51
PRPF40B-201ENST00000261897 DAZ4Q86SG3 579 aaKnown RBP11.84□□□□□ -0.51
PRPF40B-201ENST00000261897 DAZ1Q9NQZ3 744 aaKnown RBP11.84□□□□□ -0.51
PRPF40B-201ENST00000261897 DAZ3Q9NR90 486 aaKnown RBP11.84□□□□□ -0.51
PRPF40B-201ENST00000261897 IGHV4-4A0A075B6R2 117 aa11.84□□□□□ -0.51
PRPF40B-201ENST00000261897 POM121L12Q8N7R1 296 aa11.84□□□□□ -0.51
PRPF40B-201ENST00000261897 CDKN2A-AS1Q9UH64 79 aa11.84□□□□□ -0.51
PRPF40B-201ENST00000261897 Q9UF83 564 aa11.83□□□□□ -0.52
PRPF40B-201ENST00000261897 HIVEP2P31629 2446 aa11.83□□□□□ -0.52
PRPF40B-201ENST00000261897 IGHV1OR15-1A0A075B7D0 117 aa11.83□□□□□ -0.52
PRPF40B-201ENST00000261897 HIST2H2BDQ6DRA6 164 aa11.83□□□□□ -0.52
PRPF40B-201ENST00000261897 MOB4Q9Y3A3 225 aa11.83□□□□□ -0.52
PRPF40B-201ENST00000261897 TRBV30A0A0K0K1B3 111 aa11.82□□□□□ -0.52
PRPF40B-201ENST00000261897 H3BT86 120 aa11.82□□□□□ -0.52
PRPF40B-201ENST00000261897 MRPL53Q96EL3 112 aaKnown RBP11.82□□□□□ -0.52
PRPF40B-201ENST00000261897 ODF3BA8MYP8 253 aa11.82□□□□□ -0.52
PRPF40B-201ENST00000261897 C19orf54Q5BKX5 351 aa11.82□□□□□ -0.52
PRPF40B-201ENST00000261897 LINC01587Q99440 93 aa11.82□□□□□ -0.52
PRPF40B-201ENST00000261897 A0A1B0GX51 115 aa11.81□□□□□ -0.52
PRPF40B-201ENST00000261897 M0QY20 66 aa11.81□□□□□ -0.52
PRPF40B-201ENST00000261897 PRB1P04280 392 aa11.81□□□□□ -0.52
PRPF40B-201ENST00000261897 PIK3CD-AS1Q5SR53 167 aa11.81□□□□□ -0.52
PRPF40B-201ENST00000261897 LENEPQ9Y5L5 61 aa11.81□□□□□ -0.52
PRPF40B-201ENST00000261897 NOTCH2Q04721 2471 aa11.81□□□□□ -0.52
PRPF40B-201ENST00000261897 MTORP42345 2549 aa11.81□□□□□ -0.52
PRPF40B-201ENST00000261897 IGFL3Q6UXB1 125 aa11.81□□□□□ -0.52
PRPF40B-201ENST00000261897 RNF223E7ERA6 249 aa11.8□□□□□ -0.52
PRPF40B-201ENST00000261897 ATP5G1P05496 136 aa11.8□□□□□ -0.52
PRPF40B-201ENST00000261897 ITLN2Q8WWU7 325 aaPredicted RBP11.8□□□□□ -0.52
PRPF40B-201ENST00000261897 PFN2P35080 140 aa11.8□□□□□ -0.52
PRPF40B-201ENST00000261897 LINC00158P58513 81 aa11.8□□□□□ -0.52
PRPF40B-201ENST00000261897 SBSPONQ8IVN8 264 aa11.8□□□□□ -0.52
PRPF40B-201ENST00000261897 NDUFA7O95182 113 aa11.8□□□□□ -0.52
PRPF40B-201ENST00000261897 CDSNQ15517 529 aa11.8□□□□□ -0.52
PRPF40B-201ENST00000261897 MIAQ16674 131 aa11.8□□□□□ -0.52
PRPF40B-201ENST00000261897 ABCA12Q86UK0 2595 aa11.8□□□□□ -0.52
PRPF40B-201ENST00000261897 IGHV1-58A0A0C4DH39 117 aa11.79□□□□□ -0.52
PRPF40B-201ENST00000261897 NDUFA4O00483 81 aa11.79□□□□□ -0.52
PRPF40B-201ENST00000261897 C14orf132Q9NPU4 83 aa11.79□□□□□ -0.52
PRPF40B-201ENST00000261897 TRBV27A0A0K0K1C4 114 aa11.79□□□□□ -0.52
PRPF40B-201ENST00000261897 EPG5Q9HCE0 2579 aa11.79□□□□□ -0.52
PRPF40B-201ENST00000261897 A0A087WVE0 104 aa11.79□□□□□ -0.52
PRPF40B-201ENST00000261897 UBE2E2Q96LR5 201 aa11.79□□□□□ -0.52
PRPF40B-201ENST00000261897 TMEM126AQ9H061 195 aa11.79□□□□□ -0.52
PRPF40B-201ENST00000261897 LRRK2Q5S007 2527 aa11.78□□□□□ -0.52
PRPF40B-201ENST00000261897 TMEM61Q8N0U2 210 aa11.78□□□□□ -0.52
PRPF40B-201ENST00000261897 LST1O00453 97 aa11.78□□□□□ -0.52
PRPF40B-201ENST00000261897 C10orf99Q6UWK7 81 aa11.78□□□□□ -0.52
PRPF40B-201ENST00000261897 C5orf56Q8N8D9 126 aa11.78□□□□□ -0.52
PRPF40B-201ENST00000261897 BRI3O95415 125 aa11.78□□□□□ -0.52
PRPF40B-201ENST00000261897 DEFB131AP59861 70 aa11.78□□□□□ -0.52
PRPF40B-201ENST00000261897 AMELXQ99217 191 aa11.77□□□□□ -0.52
PRPF40B-201ENST00000261897 C11orf44Q8N8P7 122 aa11.77□□□□□ -0.53
PRPF40B-201ENST00000261897 Q8NA96 180 aa11.77□□□□□ -0.53
PRPF40B-201ENST00000261897 CRPP02741 224 aa11.76□□□□□ -0.53
PRPF40B-201ENST00000261897 LINC00315P59091 139 aa11.76□□□□□ -0.53
PRPF40B-201ENST00000261897 C3orf22Q8N5N4 141 aa11.76□□□□□ -0.53
PRPF40B-201ENST00000261897 DSCR8Q96T75 97 aa11.76□□□□□ -0.53
PRPF40B-201ENST00000261897 FAM223BA6NKX1 122 aa11.76□□□□□ -0.53
PRPF40B-201ENST00000261897 PAX4O43316 350 aa11.76□□□□□ -0.53
PRPF40B-201ENST00000261897 FAM223AQ8IWN6 122 aa11.76□□□□□ -0.53
PRPF40B-201ENST00000261897 PEMTQ9UBM1 199 aa11.76□□□□□ -0.53
PRPF40B-201ENST00000261897 TRACP01848 142 aa11.75□□□□□ -0.53
PRPF40B-201ENST00000261897 CFHR3Q02985 330 aa11.75□□□□□ -0.53
PRPF40B-201ENST00000261897 Q8N6K4 173 aa11.75□□□□□ -0.53
PRPF40B-201ENST00000261897 IGHV4OR15-8A0A075B7B6 117 aa11.75□□□□□ -0.53
PRPF40B-201ENST00000261897 A0A087WW49 117 aa11.75□□□□□ -0.53
PRPF40B-201ENST00000261897 SLPIP03973 132 aa11.75□□□□□ -0.53
PRPF40B-201ENST00000261897 LINC00467Q9BRT7 94 aa11.75□□□□□ -0.53
PRPF40B-201ENST00000261897 ZNF292O60281 2723 aa11.75□□□□□ -0.53
PRPF40B-201ENST00000261897 FAM19A5Q7Z5A7 132 aaPredicted RBP11.74□□□□□ -0.53
PRPF40B-201ENST00000261897 RNF152Q8N8N0 203 aa11.74□□□□□ -0.53
PRPF40B-201ENST00000261897 VSIG2Q96IQ7 327 aa11.74□□□□□ -0.53
PRPF40B-201ENST00000261897 J3KT08 172 aa11.74□□□□□ -0.53
PRPF40B-201ENST00000261897 IGHV4-38-2P0DP08 117 aa11.74□□□□□ -0.53
PRPF40B-201ENST00000261897 DEFB136Q30KP8 78 aa11.74□□□□□ -0.53
PRPF40B-201ENST00000261897 KIF25-AS1Q9Y6Z4 181 aa11.74□□□□□ -0.53
PRPF40B-201ENST00000261897 UBE2L6O14933 153 aa11.73□□□□□ -0.53
PRPF40B-201ENST00000261897 IGHV1-69P01742 117 aa11.73□□□□□ -0.53
PRPF40B-201ENST00000261897 Q6Q795 121 aa11.73□□□□□ -0.53
PRPF40B-201ENST00000261897 Q8N2B8 174 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms