RNA–Protein interactions for RNA: ENST00000261407.8

LPCAT3-201, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT3, Length 2,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-201ENST00000261407 ZNF22P17026 224 aaPredicted RBP13.97□□□□□ -0.17
LPCAT3-201ENST00000261407 VCX2Q9H322 139 aa13.97□□□□□ -0.17
LPCAT3-201ENST00000261407 ITPR2Q14571 2701 aa13.97□□□□□ -0.17
LPCAT3-201ENST00000261407 IGHV3-38A0A0C4DH36 116 aa13.97□□□□□ -0.17
LPCAT3-201ENST00000261407 TEX48A0A1B0GUV7 120 aa13.97□□□□□ -0.17
LPCAT3-201ENST00000261407 TMEM223A0PJW6 202 aa13.97□□□□□ -0.17
LPCAT3-201ENST00000261407 PDZD2O15018 2839 aa13.96□□□□□ -0.17
LPCAT3-201ENST00000261407 ANK3Q12955 4377 aaKnown RBP13.96□□□□□ -0.17
LPCAT3-201ENST00000261407 IGHV3OR16-12A0A075B7B8 117 aa13.96□□□□□ -0.17
LPCAT3-201ENST00000261407 UBE2D1P51668 147 aa13.96□□□□□ -0.17
LPCAT3-201ENST00000261407 ODF3L2Q3SX64 289 aa13.96□□□□□ -0.17
LPCAT3-201ENST00000261407 TNFRSF18Q9Y5U5 241 aa13.96□□□□□ -0.17
LPCAT3-201ENST00000261407 RHODO00212 210 aa13.95□□□□□ -0.18
LPCAT3-201ENST00000261407 IGHV3-30P01768 117 aa13.95□□□□□ -0.18
LPCAT3-201ENST00000261407 IGHV3-30-5P0DP03 117 aa13.95□□□□□ -0.18
LPCAT3-201ENST00000261407 LGALS3P17931 250 aaKnown RBP13.95□□□□□ -0.18
LPCAT3-201ENST00000261407 ZNF415Q09FC8 603 aa13.95□□□□□ -0.18
LPCAT3-201ENST00000261407 TRAV2A0A0B4J234 112 aa13.94□□□□□ -0.18
LPCAT3-201ENST00000261407 A8MWV9 139 aa13.94□□□□□ -0.18
LPCAT3-201ENST00000261407 SLC25A29Q8N8R3 303 aa13.94□□□□□ -0.18
LPCAT3-201ENST00000261407 SH2D6Q7Z4S9 175 aa13.94□□□□□ -0.18
LPCAT3-201ENST00000261407 SPXQ9BT56 116 aa13.94□□□□□ -0.18
LPCAT3-201ENST00000261407 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.93□□□□□ -0.18
LPCAT3-201ENST00000261407 IGKV2-29A2NJV5 120 aaPredicted RBP13.93□□□□□ -0.18
LPCAT3-201ENST00000261407 TSPAN13O95857 204 aa13.93□□□□□ -0.18
LPCAT3-201ENST00000261407 EDA2RQ9HAV5 297 aa13.93□□□□□ -0.18
LPCAT3-201ENST00000261407 ADARB2-AS1A8MUL3 147 aa13.93□□□□□ -0.18
LPCAT3-201ENST00000261407 CHCHD7Q9BUK0 85 aa13.92□□□□□ -0.18
LPCAT3-201ENST00000261407 TMEM238LA0A1B0GVL6 79 aa13.92□□□□□ -0.18
LPCAT3-201ENST00000261407 A6NJY4 79 aa13.92□□□□□ -0.18
LPCAT3-201ENST00000261407 CFC1BP0CG36 223 aa13.92□□□□□ -0.18
LPCAT3-201ENST00000261407 CFC1P0CG37 223 aa13.92□□□□□ -0.18
LPCAT3-201ENST00000261407 NDUFA11Q86Y39 141 aa13.92□□□□□ -0.18
LPCAT3-201ENST00000261407 LEPROTO15243 131 aa13.91□□□□□ -0.18
LPCAT3-201ENST00000261407 INSP01308 110 aa13.91□□□□□ -0.18
LPCAT3-201ENST00000261407 TRAV8-3A0A0A6YYJ7 113 aa13.9□□□□□ -0.18
LPCAT3-201ENST00000261407 F8W1H4 67 aa13.9□□□□□ -0.18
LPCAT3-201ENST00000261407 ETDBQ3ZM63 59 aa13.9□□□□□ -0.18
LPCAT3-201ENST00000261407 PRO0461Q9UI25 63 aa13.9□□□□□ -0.18
LPCAT3-201ENST00000261407 LOC107984156A0A0G2JMH3 177 aa13.9□□□□□ -0.18
LPCAT3-201ENST00000261407 CCL24O00175 119 aa13.9□□□□□ -0.18
LPCAT3-201ENST00000261407 ARL17AQ8IVW1 177 aa13.9□□□□□ -0.18
LPCAT3-201ENST00000261407 C1orf158Q8N1D5 194 aa13.9□□□□□ -0.18
LPCAT3-201ENST00000261407 C10orf126Q8N4M7 172 aa13.9□□□□□ -0.18
LPCAT3-201ENST00000261407 CITED2Q99967 270 aaPredicted RBP13.9□□□□□ -0.18
LPCAT3-201ENST00000261407 SPANXB1Q9NS25 103 aaPredicted RBP13.9□□□□□ -0.18
LPCAT3-201ENST00000261407 A8MZ25 164 aa13.89□□□□□ -0.19
LPCAT3-201ENST00000261407 LINC00467Q9BRT7 94 aa13.89□□□□□ -0.19
LPCAT3-201ENST00000261407 C2CD3Q4AC94 2353 aa13.89□□□□□ -0.19
LPCAT3-201ENST00000261407 GAGE13Q4V321 117 aa13.89□□□□□ -0.19
LPCAT3-201ENST00000261407 PYGO1Q9Y3Y4 419 aa13.89□□□□□ -0.19
LPCAT3-201ENST00000261407 EIF4EBP3O60516 100 aaPredicted RBP13.88□□□□□ -0.19
LPCAT3-201ENST00000261407 STHQ8IWL8 128 aa13.88□□□□□ -0.19
LPCAT3-201ENST00000261407 TMEM86BQ8N661 226 aa13.88□□□□□ -0.19
LPCAT3-201ENST00000261407 UBE2D4Q9Y2X8 147 aa13.88□□□□□ -0.19
LPCAT3-201ENST00000261407 IGHV3-53P01767 116 aa13.88□□□□□ -0.19
LPCAT3-201ENST00000261407 FHL3Q13643 280 aa13.88□□□□□ -0.19
LPCAT3-201ENST00000261407 IGHV3-30-3P0DP02 117 aa13.87□□□□□ -0.19
LPCAT3-201ENST00000261407 BEAN1Q3B7T3 259 aa13.87□□□□□ -0.19
LPCAT3-201ENST00000261407 MRPS36P82909 103 aaKnown RBP13.87□□□□□ -0.19
LPCAT3-201ENST00000261407 Q6ZUT4 128 aa13.87□□□□□ -0.19
LPCAT3-201ENST00000261407 PSMB2P49721 201 aa13.86□□□□□ -0.19
LPCAT3-201ENST00000261407 WFDC10AQ9H1F0 79 aa13.86□□□□□ -0.19
LPCAT3-201ENST00000261407 A4D1N5 150 aa13.85□□□□□ -0.19
LPCAT3-201ENST00000261407 INSL3P51460 131 aa13.85□□□□□ -0.19
LPCAT3-201ENST00000261407 KRTAP1-1Q07627 177 aa13.85□□□□□ -0.19
LPCAT3-201ENST00000261407 PIK3CD-AS1Q5SR53 167 aa13.85□□□□□ -0.19
LPCAT3-201ENST00000261407 TRGV1A0A0A0MS02 117 aa13.85□□□□□ -0.19
LPCAT3-201ENST00000261407 RS1O15537 224 aa13.85□□□□□ -0.19
LPCAT3-201ENST00000261407 SMCPP49901 116 aaPredicted RBP13.84□□□□□ -0.19
LPCAT3-201ENST00000261407 MUSTN1Q8IVN3 82 aa13.84□□□□□ -0.19
LPCAT3-201ENST00000261407 UBE2D3P61077 147 aa13.84□□□□□ -0.19
LPCAT3-201ENST00000261407 UBE2D2P62837 147 aa13.84□□□□□ -0.19
LPCAT3-201ENST00000261407 LINC01006Q8NI28 216 aa13.84□□□□□ -0.19
LPCAT3-201ENST00000261407 PTH2Q96A98 100 aa13.84□□□□□ -0.19
LPCAT3-201ENST00000261407 TIMM21Q9BVV7 248 aa13.84□□□□□ -0.19
LPCAT3-201ENST00000261407 HELZ2Q9BYK8 2649 aaKnown RBP13.83□□□□□ -0.19
LPCAT3-201ENST00000261407 A0A0J9YXY3 114 aa13.83□□□□□ -0.2
LPCAT3-201ENST00000261407 SPINK8P0C7L1 97 aa13.83□□□□□ -0.2
LPCAT3-201ENST00000261407 Q6ZTI0 123 aa13.83□□□□□ -0.2
LPCAT3-201ENST00000261407 COTL1Q14019 142 aa13.81□□□□□ -0.2
LPCAT3-201ENST00000261407 TCL1BO95988 128 aa13.81□□□□□ -0.2
LPCAT3-201ENST00000261407 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.81□□□□□ -0.2
LPCAT3-201ENST00000261407 ZNF418Q8TF45 676 aaPredicted RBP13.81□□□□□ -0.2
LPCAT3-201ENST00000261407 YAE1D1Q9NRH1 226 aa13.81□□□□□ -0.2
LPCAT3-201ENST00000261407 H7C2G1 150 aa13.8□□□□□ -0.2
LPCAT3-201ENST00000261407 ADAMTSL4-AS1Q5T5F5 129 aa13.8□□□□□ -0.2
LPCAT3-201ENST00000261407 PRO1854Q9UHT4 67 aa13.8□□□□□ -0.2
LPCAT3-201ENST00000261407 TRAV25A0A0B4J276 109 aa13.8□□□□□ -0.2
LPCAT3-201ENST00000261407 LINC00694P0DN24 101 aa13.8□□□□□ -0.2
LPCAT3-201ENST00000261407 IL17DQ8TAD2 202 aa13.8□□□□□ -0.2
LPCAT3-201ENST00000261407 SPANXA1Q9NS26 97 aa13.8□□□□□ -0.2
LPCAT3-201ENST00000261407 IGHV1-58A0A0C4DH39 117 aa13.79□□□□□ -0.2
LPCAT3-201ENST00000261407 NDUFA7O95182 113 aa13.79□□□□□ -0.2
LPCAT3-201ENST00000261407 GIG44P09565 113 aaPredicted RBP13.79□□□□□ -0.2
LPCAT3-201ENST00000261407 LITAFQ99732 161 aa13.79□□□□□ -0.2
LPCAT3-201ENST00000261407 PLA2G2AP14555 144 aa13.79□□□□□ -0.2
LPCAT3-201ENST00000261407 DNAJC30Q96LL9 226 aa13.79□□□□□ -0.2
LPCAT3-201ENST00000261407 TINCRA0A1B0GVN0 87 aa13.78□□□□□ -0.2
LPCAT3-201ENST00000261407 TMEM263Q8WUH6 116 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms