RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 IGHV4OR15-8A0A075B7B6 117 aa13.12□□□□□ -0.31
NDFIP1-201ENST00000253814 A0A087WW49 117 aa13.12□□□□□ -0.31
NDFIP1-201ENST00000253814 XGP55808 180 aa13.12□□□□□ -0.31
NDFIP1-201ENST00000253814 IGHV4-4A0A075B6R2 117 aa13.12□□□□□ -0.31
NDFIP1-201ENST00000253814 GAGE2AQ6NT46 116 aa13.12□□□□□ -0.31
NDFIP1-201ENST00000253814 PAX4O43316 350 aa13.12□□□□□ -0.31
NDFIP1-201ENST00000253814 ZNF22P17026 224 aaPredicted RBP13.11□□□□□ -0.31
NDFIP1-201ENST00000253814 CLUHP3Q96NS8 147 aa13.11□□□□□ -0.31
NDFIP1-201ENST00000253814 ICOSQ9Y6W8 199 aa13.11□□□□□ -0.31
NDFIP1-201ENST00000253814 TSPEAR-AS2P59090 65 aa13.1□□□□□ -0.31
NDFIP1-201ENST00000253814 PSMG3-AS1Q96PY0 264 aa13.1□□□□□ -0.31
NDFIP1-201ENST00000253814 U3KQE9 123 aa13.1□□□□□ -0.31
NDFIP1-201ENST00000253814 A0A0J9YXY3 114 aa13.1□□□□□ -0.31
NDFIP1-201ENST00000253814 IGHV3-30P01768 117 aa13.1□□□□□ -0.31
NDFIP1-201ENST00000253814 CRPP02741 224 aa13.1□□□□□ -0.31
NDFIP1-201ENST00000253814 IGHV3-30-5P0DP03 117 aa13.1□□□□□ -0.31
NDFIP1-201ENST00000253814 PFN2P35080 140 aa13.1□□□□□ -0.31
NDFIP1-201ENST00000253814 ACANP16112 2415 aa13.1□□□□□ -0.31
NDFIP1-201ENST00000253814 POLR2KP53803 58 aaKnown RBP13.1□□□□□ -0.31
NDFIP1-201ENST00000253814 ATP6V0E2Q8NHE4 81 aa13.1□□□□□ -0.31
NDFIP1-201ENST00000253814 LINC01356Q8N9X3 169 aa13.09□□□□□ -0.31
NDFIP1-201ENST00000253814 GAGE6Q13070 117 aa13.09□□□□□ -0.31
NDFIP1-201ENST00000253814 SPATA25Q9BR10 227 aa13.09□□□□□ -0.31
NDFIP1-201ENST00000253814 M0QY20 66 aa13.09□□□□□ -0.31
NDFIP1-201ENST00000253814 GAGE7O76087 117 aa13.09□□□□□ -0.31
NDFIP1-201ENST00000253814 GAGE12FP0CL80 117 aa13.09□□□□□ -0.31
NDFIP1-201ENST00000253814 GAGE12GP0CL81 117 aa13.09□□□□□ -0.31
NDFIP1-201ENST00000253814 GAGE12IP0CL82 117 aa13.09□□□□□ -0.31
NDFIP1-201ENST00000253814 C10orf105Q8TEF2 133 aa13.09□□□□□ -0.31
NDFIP1-201ENST00000253814 ZNF580Q9UK33 172 aa13.08□□□□□ -0.32
NDFIP1-201ENST00000253814 IGHV3-33P01772 117 aa13.08□□□□□ -0.32
NDFIP1-201ENST00000253814 IGLV4-3A0A075B6K6 122 aa13.08□□□□□ -0.32
NDFIP1-201ENST00000253814 GPHB5Q86YW7 130 aa13.08□□□□□ -0.32
NDFIP1-201ENST00000253814 A6NDX4 124 aa13.07□□□□□ -0.32
NDFIP1-201ENST00000253814 NFE4Q86UQ8 179 aa13.07□□□□□ -0.32
NDFIP1-201ENST00000253814 ANKRD17O75179 2603 aaKnown RBP13.07□□□□□ -0.32
NDFIP1-201ENST00000253814 ZFHX4Q86UP3 3567 aa13.07□□□□□ -0.32
NDFIP1-201ENST00000253814 CRIP2P52943 208 aaPredicted RBP13.07□□□□□ -0.32
NDFIP1-201ENST00000253814 IGIPA6NJ69 53 aa13.06□□□□□ -0.32
NDFIP1-201ENST00000253814 TRBV27A0A0K0K1C4 114 aa13.06□□□□□ -0.32
NDFIP1-201ENST00000253814 K7EMT4 169 aa13.06□□□□□ -0.32
NDFIP1-201ENST00000253814 IGLV4-69A0A075B6H9 119 aa13.05□□□□□ -0.32
NDFIP1-201ENST00000253814 TMEM223A0PJW6 202 aa13.05□□□□□ -0.32
NDFIP1-201ENST00000253814 UBE2D1P51668 147 aa13.05□□□□□ -0.32
NDFIP1-201ENST00000253814 TRIAP1O43715 76 aa13.05□□□□□ -0.32
NDFIP1-201ENST00000253814 DEFB130BP0DP73 79 aa13.05□□□□□ -0.32
NDFIP1-201ENST00000253814 DEFB130AP0DP74 79 aa13.05□□□□□ -0.32
NDFIP1-201ENST00000253814 LINC01619G3V211 115 aa13.04□□□□□ -0.32
NDFIP1-201ENST00000253814 IGHV1-58A0A0C4DH39 117 aa13.04□□□□□ -0.32
NDFIP1-201ENST00000253814 TRBV10-2A0A0K0K1G8 114 aa13.04□□□□□ -0.32
NDFIP1-201ENST00000253814 TMEM61Q8N0U2 210 aa13.04□□□□□ -0.32
NDFIP1-201ENST00000253814 CDKN2A-AS1Q9UH64 79 aa13.03□□□□□ -0.32
NDFIP1-201ENST00000253814 ZZEF1O43149 2961 aa13.03□□□□□ -0.32
NDFIP1-201ENST00000253814 DMXL1Q9Y485 3027 aa13.03□□□□□ -0.32
NDFIP1-201ENST00000253814 EPG5Q9HCE0 2579 aa13.03□□□□□ -0.32
NDFIP1-201ENST00000253814 LGALS9O00182 355 aa13.03□□□□□ -0.32
NDFIP1-201ENST00000253814 CRYGDP07320 174 aa13.03□□□□□ -0.32
NDFIP1-201ENST00000253814 KLLNB2CW77 178 aa13.02□□□□□ -0.32
NDFIP1-201ENST00000253814 C6orf226Q5I0X4 101 aa13.02□□□□□ -0.32
NDFIP1-201ENST00000253814 Q6ZSV7 163 aa13.02□□□□□ -0.32
NDFIP1-201ENST00000253814 ELANEP08246 267 aa13.02□□□□□ -0.33
NDFIP1-201ENST00000253814 ZNF462Q96JM2 2506 aa13.02□□□□□ -0.33
NDFIP1-201ENST00000253814 COL27A1Q8IZC6 1860 aaPredicted RBP13.02□□□□□ -0.33
NDFIP1-201ENST00000253814 K7EQG2 157 aa13.01□□□□□ -0.33
NDFIP1-201ENST00000253814 TSHBP01222 138 aa13.01□□□□□ -0.33
NDFIP1-201ENST00000253814 SMIM20Q8N5G0 67 aa13.01□□□□□ -0.33
NDFIP1-201ENST00000253814 SPANXA1Q9NS26 97 aa13.01□□□□□ -0.33
NDFIP1-201ENST00000253814 HTN3P15516 51 aa13.01□□□□□ -0.33
NDFIP1-201ENST00000253814 HERVK_113P63121 156 aa13□□□□□ -0.33
NDFIP1-201ENST00000253814 EDA2RQ9HAV5 297 aa13□□□□□ -0.33
NDFIP1-201ENST00000253814 NOP10Q9NPE3 64 aaKnown RBP13□□□□□ -0.33
NDFIP1-201ENST00000253814 VPREB3Q9UKI3 123 aa13□□□□□ -0.33
NDFIP1-201ENST00000253814 LINC00467Q9BRT7 94 aa13□□□□□ -0.33
NDFIP1-201ENST00000253814 NSUN5P1Q3KNT7 163 aa13□□□□□ -0.33
NDFIP1-201ENST00000253814 DCANP1Q8TF63 244 aa13□□□□□ -0.33
NDFIP1-201ENST00000253814 TRAV4A0A0B4J268 109 aa12.99□□□□□ -0.33
NDFIP1-201ENST00000253814 RBMY1BA6NDE4 496 aaKnown RBP12.99□□□□□ -0.33
NDFIP1-201ENST00000253814 RBMY1EA6NEQ0 496 aaKnown RBP12.99□□□□□ -0.33
NDFIP1-201ENST00000253814 NXPH4O95158 308 aa12.99□□□□□ -0.33
NDFIP1-201ENST00000253814 RBMY1DP0C7P1 496 aaKnown RBP12.99□□□□□ -0.33
NDFIP1-201ENST00000253814 BAALC-AS2P0C853 105 aa12.99□□□□□ -0.33
NDFIP1-201ENST00000253814 RBMY1A1P0DJD3 496 aaKnown RBP12.99□□□□□ -0.33
NDFIP1-201ENST00000253814 RBMY1CP0DJD4 496 aa12.99□□□□□ -0.33
NDFIP1-201ENST00000253814 HIST1H4AP62805 103 aaKnown RBP12.99□□□□□ -0.33
NDFIP1-201ENST00000253814 A0A0B4J2C4 111 aa12.99□□□□□ -0.33
NDFIP1-201ENST00000253814 GATA3P23771 443 aa12.99□□□□□ -0.33
NDFIP1-201ENST00000253814 DSCR9P59020 149 aa12.99□□□□□ -0.33
NDFIP1-201ENST00000253814 C9orf153Q5TBE3 101 aa12.98□□□□□ -0.33
NDFIP1-201ENST00000253814 CLPSL2Q6UWE3 100 aa12.98□□□□□ -0.33
NDFIP1-201ENST00000253814 VSIG2Q96IQ7 327 aa12.98□□□□□ -0.33
NDFIP1-201ENST00000253814 A0A096LPF7 62 aa12.97□□□□□ -0.33
NDFIP1-201ENST00000253814 SMCPP49901 116 aaPredicted RBP12.97□□□□□ -0.33
NDFIP1-201ENST00000253814 AVPP01185 164 aa12.97□□□□□ -0.33
NDFIP1-201ENST00000253814 UBE2D3P61077 147 aa12.97□□□□□ -0.33
NDFIP1-201ENST00000253814 UBE2D2P62837 147 aa12.97□□□□□ -0.33
NDFIP1-201ENST00000253814 TMEM243Q9BU79 118 aa12.97□□□□□ -0.33
NDFIP1-201ENST00000253814 MIAQ16674 131 aa12.97□□□□□ -0.33
NDFIP1-201ENST00000253814 C5orf38Q86SI9 138 aa12.97□□□□□ -0.33
NDFIP1-201ENST00000253814 TRBV6-5A0A0K0K1A5 114 aa12.96□□□□□ -0.34
NDFIP1-201ENST00000253814 FAM236AA0A1B0GUQ0 79 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms