RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 RHODO00212 210 aa13.61□□□□□ -0.23
LRP3-201ENST00000253193 CFAP126Q5VTH2 177 aa13.61□□□□□ -0.23
LRP3-201ENST00000253193 C10orf126Q8N4M7 172 aa13.61□□□□□ -0.23
LRP3-201ENST00000253193 MT-ATP8P03928 68 aa13.6□□□□□ -0.23
LRP3-201ENST00000253193 LEPROTO15243 131 aa13.6□□□□□ -0.23
LRP3-201ENST00000253193 SPINK8P0C7L1 97 aa13.6□□□□□ -0.23
LRP3-201ENST00000253193 TRBV6-5A0A0K0K1A5 114 aa13.6□□□□□ -0.23
LRP3-201ENST00000253193 LINC01619G3V211 115 aa13.6□□□□□ -0.23
LRP3-201ENST00000253193 TCL1BO95988 128 aa13.6□□□□□ -0.23
LRP3-201ENST00000253193 CELSR2Q9HCU4 2923 aa13.59□□□□□ -0.23
LRP3-201ENST00000253193 ACANP16112 2415 aa13.59□□□□□ -0.23
LRP3-201ENST00000253193 IGLV4-3A0A075B6K6 122 aa13.59□□□□□ -0.23
LRP3-201ENST00000253193 ZNF22P17026 224 aaPredicted RBP13.59□□□□□ -0.23
LRP3-201ENST00000253193 RPL32P62910 135 aaKnown RBP13.59□□□□□ -0.23
LRP3-201ENST00000253193 ZNF625Q96I27 306 aaPredicted RBP13.59□□□□□ -0.23
LRP3-201ENST00000253193 IGHV3-30P01768 117 aa13.59□□□□□ -0.23
LRP3-201ENST00000253193 IGHV3-30-5P0DP03 117 aa13.59□□□□□ -0.23
LRP3-201ENST00000253193 CDIP1Q9H305 208 aa13.59□□□□□ -0.23
LRP3-201ENST00000253193 TRGV1A0A0A0MS02 117 aa13.58□□□□□ -0.23
LRP3-201ENST00000253193 M0R2P5 195 aa13.58□□□□□ -0.23
LRP3-201ENST00000253193 ODF3Q96PU9 254 aa13.58□□□□□ -0.24
LRP3-201ENST00000253193 C1QTNF4Q9BXJ3 329 aa13.58□□□□□ -0.24
LRP3-201ENST00000253193 NDUFA12Q9UI09 145 aa13.58□□□□□ -0.24
LRP3-201ENST00000253193 A0A1B0GV72 72 aa13.58□□□□□ -0.24
LRP3-201ENST00000253193 J3QLI3 93 aa13.58□□□□□ -0.24
LRP3-201ENST00000253193 UBE2D1P51668 147 aa13.57□□□□□ -0.24
LRP3-201ENST00000253193 STHQ8IWL8 128 aa13.57□□□□□ -0.24
LRP3-201ENST00000253193 A8MZ25 164 aa13.57□□□□□ -0.24
LRP3-201ENST00000253193 NSUN5P1Q3KNT7 163 aa13.57□□□□□ -0.24
LRP3-201ENST00000253193 CARD19Q96LW7 228 aa13.57□□□□□ -0.24
LRP3-201ENST00000253193 TRBV20-1A0A075B6N2 111 aa13.56□□□□□ -0.24
LRP3-201ENST00000253193 IGKV3OR2-268A0A0C4DH90 116 aa13.56□□□□□ -0.24
LRP3-201ENST00000253193 TMEM223A0PJW6 202 aa13.56□□□□□ -0.24
LRP3-201ENST00000253193 IGHV3-30-3P0DP02 117 aa13.56□□□□□ -0.24
LRP3-201ENST00000253193 SCGB1A1P11684 91 aa13.56□□□□□ -0.24
LRP3-201ENST00000253193 H3BMM0 161 aa13.56□□□□□ -0.24
LRP3-201ENST00000253193 Q96MF0 132 aa13.56□□□□□ -0.24
LRP3-201ENST00000253193 ZNF702PQ9H963 129 aa13.56□□□□□ -0.24
LRP3-201ENST00000253193 Q9UF83 564 aa13.56□□□□□ -0.24
LRP3-201ENST00000253193 TRAV26-1A0A087WT03 109 aa13.55□□□□□ -0.24
LRP3-201ENST00000253193 XGP55808 180 aa13.55□□□□□ -0.24
LRP3-201ENST00000253193 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.54□□□□□ -0.24
LRP3-201ENST00000253193 RBMY1A1P0DJD3 496 aaKnown RBP13.54□□□□□ -0.24
LRP3-201ENST00000253193 RBMY1CP0DJD4 496 aa13.54□□□□□ -0.24
LRP3-201ENST00000253193 RBMY1FQ15415 496 aaKnown RBP13.54□□□□□ -0.24
LRP3-201ENST00000253193 DAND5Q8N907 189 aa13.54□□□□□ -0.24
LRP3-201ENST00000253193 INSP01308 110 aa13.54□□□□□ -0.24
LRP3-201ENST00000253193 TRAV13-1A0A0B4J241 112 aa13.54□□□□□ -0.24
LRP3-201ENST00000253193 TMEM89A2RUT3 159 aa13.54□□□□□ -0.24
LRP3-201ENST00000253193 COX6CP09669 75 aa13.54□□□□□ -0.24
LRP3-201ENST00000253193 SLC25A20O43772 301 aa13.53□□□□□ -0.24
LRP3-201ENST00000253193 Q6YL49 198 aa13.53□□□□□ -0.24
LRP3-201ENST00000253193 PPDPFLQ8WWR9 84 aa13.53□□□□□ -0.24
LRP3-201ENST00000253193 FN1P02751 2386 aaKnown RBP13.53□□□□□ -0.24
LRP3-201ENST00000253193 CSMD2Q7Z408 3487 aa13.53□□□□□ -0.24
LRP3-201ENST00000253193 POM121L12Q8N7R1 296 aa13.53□□□□□ -0.24
LRP3-201ENST00000253193 A0A0J9YXY3 114 aa13.52□□□□□ -0.25
LRP3-201ENST00000253193 TEX15Q9BXT5 2789 aa13.51□□□□□ -0.25
LRP3-201ENST00000253193 KRTAP10-9P60411 292 aa13.51□□□□□ -0.25
LRP3-201ENST00000253193 MEIG1Q5JSS6 88 aa13.51□□□□□ -0.25
LRP3-201ENST00000253193 UBE2D3P61077 147 aa13.51□□□□□ -0.25
LRP3-201ENST00000253193 UBE2D2P62837 147 aa13.51□□□□□ -0.25
LRP3-201ENST00000253193 Q6ZUT4 128 aa13.51□□□□□ -0.25
LRP3-201ENST00000253193 IGHV4-31P0DP07 118 aa13.5□□□□□ -0.25
LRP3-201ENST00000253193 TEN1Q86WV5 123 aa13.5□□□□□ -0.25
LRP3-201ENST00000253193 ANKRD29Q8N6D5 301 aa13.5□□□□□ -0.25
LRP3-201ENST00000253193 MAP6D1Q9H9H5 199 aa13.5□□□□□ -0.25
LRP3-201ENST00000253193 CIRBPQ14011 172 aaKnown RBP13.5□□□□□ -0.25
LRP3-201ENST00000253193 Q6ZSN1 163 aa13.5□□□□□ -0.25
LRP3-201ENST00000253193 LINC00467Q9BRT7 94 aa13.49□□□□□ -0.25
LRP3-201ENST00000253193 EIF4EBP3O60516 100 aaPredicted RBP13.48□□□□□ -0.25
LRP3-201ENST00000253193 CRYBA4P53673 196 aa13.48□□□□□ -0.25
LRP3-201ENST00000253193 ATXN8Q156A1 80 aa13.48□□□□□ -0.25
LRP3-201ENST00000253193 TRGV2A0A075B6R0 118 aa13.48□□□□□ -0.25
LRP3-201ENST00000253193 GAGE12JA6NER3 117 aa13.47□□□□□ -0.25
LRP3-201ENST00000253193 GAGE4Q13068 117 aa13.47□□□□□ -0.25
LRP3-201ENST00000253193 GAGE5Q13069 117 aa13.47□□□□□ -0.25
LRP3-201ENST00000253193 NTN5Q8WTR8 489 aaPredicted RBP13.47□□□□□ -0.25
LRP3-201ENST00000253193 IGHV3-33P01772 117 aa13.47□□□□□ -0.25
LRP3-201ENST00000253193 HIVEP2P31629 2446 aa13.47□□□□□ -0.25
LRP3-201ENST00000253193 RBMY1BA6NDE4 496 aaKnown RBP13.47□□□□□ -0.25
LRP3-201ENST00000253193 RBMY1EA6NEQ0 496 aaKnown RBP13.47□□□□□ -0.25
LRP3-201ENST00000253193 UBE2L6O14933 153 aa13.47□□□□□ -0.25
LRP3-201ENST00000253193 RBMY1DP0C7P1 496 aaKnown RBP13.47□□□□□ -0.25
LRP3-201ENST00000253193 CHD6Q8TD26 2715 aa13.46□□□□□ -0.25
LRP3-201ENST00000253193 IGHV1-58A0A0C4DH39 117 aa13.46□□□□□ -0.25
LRP3-201ENST00000253193 RPL35AP18077 110 aaKnown RBP13.46□□□□□ -0.25
LRP3-201ENST00000253193 RPL36AP83881 106 aaKnown RBP13.45□□□□□ -0.26
LRP3-201ENST00000253193 RPL36ALQ969Q0 106 aaKnown RBP13.45□□□□□ -0.26
LRP3-201ENST00000253193 AMELXQ99217 191 aa13.45□□□□□ -0.26
LRP3-201ENST00000253193 TOMM7Q9P0U1 55 aa13.45□□□□□ -0.26
LRP3-201ENST00000253193 CDKN2A-AS1Q9UH64 79 aa13.45□□□□□ -0.26
LRP3-201ENST00000253193 SPANXA1Q9NS26 97 aa13.45□□□□□ -0.26
LRP3-201ENST00000253193 C2orf82Q6UX34 121 aa13.44□□□□□ -0.26
LRP3-201ENST00000253193 DEFB114Q30KQ6 69 aa13.44□□□□□ -0.26
LRP3-201ENST00000253193 DEFB113Q30KQ7 82 aa13.44□□□□□ -0.26
LRP3-201ENST00000253193 Q6ZSV7 163 aa13.44□□□□□ -0.26
LRP3-201ENST00000253193 RNF183Q96D59 192 aa13.44□□□□□ -0.26
LRP3-201ENST00000253193 ATP6V0E2Q8NHE4 81 aa13.43□□□□□ -0.26
LRP3-201ENST00000253193 TMEM263Q8WUH6 116 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms