RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 LEPROTO15243 131 aa11.06□□□□□ -0.64
PMPCB-201ENST00000249269 NDUFS5O43920 106 aa11.06□□□□□ -0.64
PMPCB-201ENST00000249269 RNASE3P12724 160 aaKnown RBP11.06□□□□□ -0.64
PMPCB-201ENST00000249269 LINC00315P59091 139 aa11.06□□□□□ -0.64
PMPCB-201ENST00000249269 NSUN5P1Q3KNT7 163 aa11.06□□□□□ -0.64
PMPCB-201ENST00000249269 Q8N2B8 174 aa11.06□□□□□ -0.64
PMPCB-201ENST00000249269 IGHV3-35A0A0C4DH35 117 aa11.05□□□□□ -0.64
PMPCB-201ENST00000249269 SDHAF1A6NFY7 115 aa11.05□□□□□ -0.64
PMPCB-201ENST00000249269 KLLNB2CW77 178 aa11.05□□□□□ -0.64
PMPCB-201ENST00000249269 MGPP08493 103 aa11.05□□□□□ -0.64
PMPCB-201ENST00000249269 CFC1BP0CG36 223 aa11.05□□□□□ -0.64
PMPCB-201ENST00000249269 CFC1P0CG37 223 aa11.05□□□□□ -0.64
PMPCB-201ENST00000249269 KLK15Q9H2R5 256 aa11.05□□□□□ -0.64
PMPCB-201ENST00000249269 GPR179Q6PRD1 2367 aa11.05□□□□□ -0.64
PMPCB-201ENST00000249269 TMEM256-PLSCR3K7ERE1 68 aa11.04□□□□□ -0.64
PMPCB-201ENST00000249269 URB1O60287 2271 aaKnown RBP11.04□□□□□ -0.64
PMPCB-201ENST00000249269 IGHV3OR16-8A0A075B7F1 116 aa11.04□□□□□ -0.64
PMPCB-201ENST00000249269 IGHV3-66A0A0C4DH42 116 aa11.04□□□□□ -0.64
PMPCB-201ENST00000249269 TSHBP01222 138 aa11.04□□□□□ -0.64
PMPCB-201ENST00000249269 C5orf38Q86SI9 138 aa11.03□□□□□ -0.64
PMPCB-201ENST00000249269 LINC00474Q9P2X8 69 aa11.03□□□□□ -0.64
PMPCB-201ENST00000249269 TMEM243Q9BU79 118 aa11.03□□□□□ -0.64
PMPCB-201ENST00000249269 SLC25A20O43772 301 aa11.02□□□□□ -0.64
PMPCB-201ENST00000249269 ZFP36P26651 326 aaKnown RBP11.02□□□□□ -0.64
PMPCB-201ENST00000249269 AMELXQ99217 191 aa11.02□□□□□ -0.64
PMPCB-201ENST00000249269 ZNF580Q9UK33 172 aa11.02□□□□□ -0.64
PMPCB-201ENST00000249269 LST1O00453 97 aa11.02□□□□□ -0.65
PMPCB-201ENST00000249269 G3V318 75 aa11.01□□□□□ -0.65
PMPCB-201ENST00000249269 VPS13AQ96RL7 3174 aa11.01□□□□□ -0.65
PMPCB-201ENST00000249269 AGRNO00468 2067 aa11.01□□□□□ -0.65
PMPCB-201ENST00000249269 SYNJ2BPP57105 145 aa11.01□□□□□ -0.65
PMPCB-201ENST00000249269 ATXN8Q156A1 80 aa11.01□□□□□ -0.65
PMPCB-201ENST00000249269 SVILO95425 2214 aa11.01□□□□□ -0.65
PMPCB-201ENST00000249269 TMEM223A0PJW6 202 aa11□□□□□ -0.65
PMPCB-201ENST00000249269 RNASE4P34096 147 aaKnown RBP11□□□□□ -0.65
PMPCB-201ENST00000249269 CIRBPQ14011 172 aaKnown RBP11□□□□□ -0.65
PMPCB-201ENST00000249269 FHL2Q14192 279 aa11□□□□□ -0.65
PMPCB-201ENST00000249269 NTN5Q8WTR8 489 aaPredicted RBP11□□□□□ -0.65
PMPCB-201ENST00000249269 UBE2L6O14933 153 aa11□□□□□ -0.65
PMPCB-201ENST00000249269 PIK3CD-AS1Q5SR53 167 aa11□□□□□ -0.65
PMPCB-201ENST00000249269 SUMO4Q6EEV6 95 aa11□□□□□ -0.65
PMPCB-201ENST00000249269 NBEAQ8NFP9 2946 aa10.99□□□□□ -0.65
PMPCB-201ENST00000249269 TRBV30A0A0K0K1B3 111 aa10.99□□□□□ -0.65
PMPCB-201ENST00000249269 IGHV3-33P01772 117 aa10.99□□□□□ -0.65
PMPCB-201ENST00000249269 KLHL30-AS1Q8NEE0 82 aa10.99□□□□□ -0.65
PMPCB-201ENST00000249269 TMEM263Q8WUH6 116 aaKnown RBP10.99□□□□□ -0.65
PMPCB-201ENST00000249269 ESM1Q9NQ30 184 aa10.99□□□□□ -0.65
PMPCB-201ENST00000249269 TMEM170BQ5T4T1 132 aa10.99□□□□□ -0.65
PMPCB-201ENST00000249269 RBM3P98179 157 aaKnown RBP10.98□□□□□ -0.65
PMPCB-201ENST00000249269 ABCA1O95477 2261 aa10.98□□□□□ -0.65
PMPCB-201ENST00000249269 IGHV3OR16-13A0A075B7E8 117 aa10.98□□□□□ -0.65
PMPCB-201ENST00000249269 IGHV3-74A0A0B4J1X5 117 aa10.98□□□□□ -0.65
PMPCB-201ENST00000249269 RBMY1BA6NDE4 496 aaKnown RBP10.98□□□□□ -0.65
PMPCB-201ENST00000249269 RBMY1EA6NEQ0 496 aaKnown RBP10.98□□□□□ -0.65
PMPCB-201ENST00000249269 J3QL48 77 aa10.98□□□□□ -0.65
PMPCB-201ENST00000249269 RBMY1DP0C7P1 496 aaKnown RBP10.98□□□□□ -0.65
PMPCB-201ENST00000249269 RBMY1A1P0DJD3 496 aaKnown RBP10.98□□□□□ -0.65
PMPCB-201ENST00000249269 TRAV8-3A0A0A6YYJ7 113 aa10.97□□□□□ -0.65
PMPCB-201ENST00000249269 LINC00588Q9Y4M8 146 aa10.97□□□□□ -0.65
PMPCB-201ENST00000249269 GNRH2O43555 120 aa10.97□□□□□ -0.65
PMPCB-201ENST00000249269 LINC00643Q86TS7 51 aa10.97□□□□□ -0.65
PMPCB-201ENST00000249269 TNRC18O15417 2968 aaPredicted RBP10.96□□□□□ -0.65
PMPCB-201ENST00000249269 IGHV3-49A0A0A0MS15 119 aa10.96□□□□□ -0.65
PMPCB-201ENST00000249269 LY6HO94772 140 aa10.96□□□□□ -0.65
PMPCB-201ENST00000249269 F5H697 171 aa10.96□□□□□ -0.66
PMPCB-201ENST00000249269 CCKP06307 115 aa10.96□□□□□ -0.66
PMPCB-201ENST00000249269 LMO4P61968 165 aa10.95□□□□□ -0.66
PMPCB-201ENST00000249269 TRBV10-2A0A0K0K1G8 114 aa10.95□□□□□ -0.66
PMPCB-201ENST00000249269 TSPEAR-AS2P59090 65 aa10.95□□□□□ -0.66
PMPCB-201ENST00000249269 Q6ZS46 218 aa10.95□□□□□ -0.66
PMPCB-201ENST00000249269 LCA10Q71F78 164 aa10.94□□□□□ -0.66
PMPCB-201ENST00000249269 LINC00337Q8N6G1 96 aa10.94□□□□□ -0.66
PMPCB-201ENST00000249269 C20orf203Q8NBC4 194 aa10.94□□□□□ -0.66
PMPCB-201ENST00000249269 I3L3M4 83 aa10.94□□□□□ -0.66
PMPCB-201ENST00000249269 M0QY20 66 aa10.94□□□□□ -0.66
PMPCB-201ENST00000249269 ACYP1P07311 99 aa10.94□□□□□ -0.66
PMPCB-201ENST00000249269 H3BMM0 161 aa10.93□□□□□ -0.66
PMPCB-201ENST00000249269 UBE2WQ96B02 151 aa10.93□□□□□ -0.66
PMPCB-201ENST00000249269 RHPN1-AS1Q9BWJ2 59 aa10.93□□□□□ -0.66
PMPCB-201ENST00000249269 COX6CP09669 75 aa10.93□□□□□ -0.66
PMPCB-201ENST00000249269 S100A7L2Q5SY68 101 aa10.93□□□□□ -0.66
PMPCB-201ENST00000249269 Q6ZVQ6 151 aa10.93□□□□□ -0.66
PMPCB-201ENST00000249269 DSPP15924 2871 aaKnown RBP10.92□□□□□ -0.66
PMPCB-201ENST00000249269 IGHV3-16A0A0C4DH30 117 aa10.92□□□□□ -0.66
PMPCB-201ENST00000249269 ZNF22P17026 224 aaPredicted RBP10.92□□□□□ -0.66
PMPCB-201ENST00000249269 CELSR3Q9NYQ7 3312 aa10.92□□□□□ -0.66
PMPCB-201ENST00000249269 TEX49A0A1B0GTD5 131 aa10.91□□□□□ -0.66
PMPCB-201ENST00000249269 IGLV1-40P01703 118 aa10.91□□□□□ -0.66
PMPCB-201ENST00000249269 RPL39P62891 51 aaKnown RBP10.91□□□□□ -0.66
PMPCB-201ENST00000249269 Q75L30 129 aa10.91□□□□□ -0.66
PMPCB-201ENST00000249269 C19orf73Q9NVV2 129 aa10.91□□□□□ -0.66
PMPCB-201ENST00000249269 A0A0J9YXY3 114 aa10.91□□□□□ -0.66
PMPCB-201ENST00000249269 LINC00313P59037 77 aa10.91□□□□□ -0.66
PMPCB-201ENST00000249269 DEFB121Q5J5C9 76 aa10.91□□□□□ -0.66
PMPCB-201ENST00000249269 PHF5AQ7RTV0 110 aaKnown RBP10.91□□□□□ -0.66
PMPCB-201ENST00000249269 NCOR1O75376 2440 aa10.9□□□□□ -0.66
PMPCB-201ENST00000249269 MUSTN1Q8IVN3 82 aa10.9□□□□□ -0.66
PMPCB-201ENST00000249269 H0Y9J4 135 aa10.89□□□□□ -0.67
PMPCB-201ENST00000249269 LYPD5Q6UWN5 251 aa10.89□□□□□ -0.67
PMPCB-201ENST00000249269 IGLV4-3A0A075B6K6 122 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms