RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 NFE4Q86UQ8 179 aa12.6□□□□□ -0.39
LRFN3-201ENST00000246529 VCX2Q9H322 139 aa12.6□□□□□ -0.39
LRFN3-201ENST00000246529 A0A1B0GWB2 263 aa12.6□□□□□ -0.39
LRFN3-201ENST00000246529 FHL3Q13643 280 aa12.6□□□□□ -0.39
LRFN3-201ENST00000246529 AMELXQ99217 191 aa12.6□□□□□ -0.39
LRFN3-201ENST00000246529 YAE1D1Q9NRH1 226 aa12.6□□□□□ -0.39
LRFN3-201ENST00000246529 MTORP42345 2549 aa12.6□□□□□ -0.39
LRFN3-201ENST00000246529 ANK3Q12955 4377 aaKnown RBP12.6□□□□□ -0.39
LRFN3-201ENST00000246529 J3QQQ9 107 aa12.59□□□□□ -0.39
LRFN3-201ENST00000246529 EDA2RQ9HAV5 297 aa12.59□□□□□ -0.39
LRFN3-201ENST00000246529 NACAE9PAV3 2078 aa12.59□□□□□ -0.39
LRFN3-201ENST00000246529 ZNF22P17026 224 aaPredicted RBP12.59□□□□□ -0.39
LRFN3-201ENST00000246529 RRN3P1Q2M238 152 aa12.59□□□□□ -0.39
LRFN3-201ENST00000246529 TMEM223A0PJW6 202 aa12.58□□□□□ -0.4
LRFN3-201ENST00000246529 STHQ8IWL8 128 aa12.58□□□□□ -0.4
LRFN3-201ENST00000246529 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.57□□□□□ -0.4
LRFN3-201ENST00000246529 IGKV2-29A2NJV5 120 aaPredicted RBP12.57□□□□□ -0.4
LRFN3-201ENST00000246529 LGALS3P17931 250 aaKnown RBP12.57□□□□□ -0.4
LRFN3-201ENST00000246529 C1orf158Q8N1D5 194 aa12.57□□□□□ -0.4
LRFN3-201ENST00000246529 RHODO00212 210 aa12.57□□□□□ -0.4
LRFN3-201ENST00000246529 SFTA2Q6UW10 78 aa12.57□□□□□ -0.4
LRFN3-201ENST00000246529 SETXQ7Z333 2677 aaKnown RBP12.57□□□□□ -0.4
LRFN3-201ENST00000246529 H3BMG7 143 aa12.56□□□□□ -0.4
LRFN3-201ENST00000246529 MTURNQ8N3F0 131 aa12.56□□□□□ -0.4
LRFN3-201ENST00000246529 LINC01006Q8NI28 216 aa12.56□□□□□ -0.4
LRFN3-201ENST00000246529 CHCHD7Q9BUK0 85 aa12.56□□□□□ -0.4
LRFN3-201ENST00000246529 PGPEP1Q9NXJ5 209 aa12.56□□□□□ -0.4
LRFN3-201ENST00000246529 K7ERU9 68 aa12.56□□□□□ -0.4
LRFN3-201ENST00000246529 APOMO95445 188 aa12.55□□□□□ -0.4
LRFN3-201ENST00000246529 TEX29Q8N6K0 151 aa12.55□□□□□ -0.4
LRFN3-201ENST00000246529 LINC00467Q9BRT7 94 aa12.55□□□□□ -0.4
LRFN3-201ENST00000246529 BEAN1Q3B7T3 259 aa12.55□□□□□ -0.4
LRFN3-201ENST00000246529 IGHV3-53P01767 116 aa12.54□□□□□ -0.4
LRFN3-201ENST00000246529 UBE2D1P51668 147 aa12.54□□□□□ -0.4
LRFN3-201ENST00000246529 SPXQ9BT56 116 aa12.54□□□□□ -0.4
LRFN3-201ENST00000246529 WFDC10AQ9H1F0 79 aa12.54□□□□□ -0.4
LRFN3-201ENST00000246529 JMJD1CQ15652 2540 aa12.54□□□□□ -0.4
LRFN3-201ENST00000246529 TRAV25A0A0B4J276 109 aa12.54□□□□□ -0.4
LRFN3-201ENST00000246529 LEPROTO15243 131 aa12.54□□□□□ -0.4
LRFN3-201ENST00000246529 RS1O15537 224 aa12.54□□□□□ -0.4
LRFN3-201ENST00000246529 PIK3CD-AS1Q5SR53 167 aa12.54□□□□□ -0.4
LRFN3-201ENST00000246529 SLC25A29Q8N8R3 303 aa12.54□□□□□ -0.4
LRFN3-201ENST00000246529 PTH2Q96A98 100 aa12.54□□□□□ -0.4
LRFN3-201ENST00000246529 TRGV1A0A0A0MS02 117 aa12.53□□□□□ -0.4
LRFN3-201ENST00000246529 IGHV3-30P01768 117 aa12.53□□□□□ -0.4
LRFN3-201ENST00000246529 IGHV3-30-5P0DP03 117 aa12.53□□□□□ -0.4
LRFN3-201ENST00000246529 PYGO1Q9Y3Y4 419 aa12.53□□□□□ -0.4
LRFN3-201ENST00000246529 ADARB2-AS1A8MUL3 147 aa12.53□□□□□ -0.4
LRFN3-201ENST00000246529 WFDC2Q14508 124 aa12.53□□□□□ -0.4
LRFN3-201ENST00000246529 TSSC4Q9Y5U2 329 aaPredicted RBP12.53□□□□□ -0.4
LRFN3-201ENST00000246529 HELZ2Q9BYK8 2649 aaKnown RBP12.53□□□□□ -0.4
LRFN3-201ENST00000246529 UBE2D4Q9Y2X8 147 aa12.52□□□□□ -0.4
LRFN3-201ENST00000246529 RPL24P83731 157 aaKnown RBP12.52□□□□□ -0.41
LRFN3-201ENST00000246529 TRAV8-3A0A0A6YYJ7 113 aa12.51□□□□□ -0.41
LRFN3-201ENST00000246529 TSPAN13O95857 204 aa12.51□□□□□ -0.41
LRFN3-201ENST00000246529 Q6ZUT4 128 aa12.51□□□□□ -0.41
LRFN3-201ENST00000246529 CLUHP3Q96NS8 147 aa12.51□□□□□ -0.41
LRFN3-201ENST00000246529 SPANXB1Q9NS25 103 aaPredicted RBP12.51□□□□□ -0.41
LRFN3-201ENST00000246529 NOTCH3Q9UM47 2321 aa12.51□□□□□ -0.41
LRFN3-201ENST00000246529 PLA2G2AP14555 144 aa12.5□□□□□ -0.41
LRFN3-201ENST00000246529 Q6ZTI0 123 aa12.5□□□□□ -0.41
LRFN3-201ENST00000246529 UNC79Q9P2D8 2635 aa12.5□□□□□ -0.41
LRFN3-201ENST00000246529 TEX48A0A1B0GUV7 120 aa12.5□□□□□ -0.41
LRFN3-201ENST00000246529 G3V4G9 280 aa12.5□□□□□ -0.41
LRFN3-201ENST00000246529 RNASE1P07998 156 aaKnown RBP12.5□□□□□ -0.41
LRFN3-201ENST00000246529 MRPS36P82909 103 aaKnown RBP12.5□□□□□ -0.41
LRFN3-201ENST00000246529 NDUFA11Q86Y39 141 aa12.5□□□□□ -0.41
LRFN3-201ENST00000246529 C10orf126Q8N4M7 172 aa12.5□□□□□ -0.41
LRFN3-201ENST00000246529 A8MZ25 164 aa12.49□□□□□ -0.41
LRFN3-201ENST00000246529 CFC1BP0CG36 223 aa12.49□□□□□ -0.41
LRFN3-201ENST00000246529 CFC1P0CG37 223 aa12.49□□□□□ -0.41
LRFN3-201ENST00000246529 IGHV3-30-3P0DP02 117 aa12.49□□□□□ -0.41
LRFN3-201ENST00000246529 TMEM238C9JI98 176 aa12.49□□□□□ -0.41
LRFN3-201ENST00000246529 IL17DQ8TAD2 202 aa12.49□□□□□ -0.41
LRFN3-201ENST00000246529 SMR3AQ99954 134 aa12.49□□□□□ -0.41
LRFN3-201ENST00000246529 GIG44P09565 113 aaPredicted RBP12.48□□□□□ -0.41
LRFN3-201ENST00000246529 LOC107984156A0A0G2JMH3 177 aa12.48□□□□□ -0.41
LRFN3-201ENST00000246529 ARL17AQ8IVW1 177 aa12.48□□□□□ -0.41
LRFN3-201ENST00000246529 DNAJC30Q96LL9 226 aa12.48□□□□□ -0.41
LRFN3-201ENST00000246529 TIMM21Q9BVV7 248 aa12.48□□□□□ -0.41
LRFN3-201ENST00000246529 RPL35AP18077 110 aaKnown RBP12.47□□□□□ -0.41
LRFN3-201ENST00000246529 C16orf95Q9H693 158 aa12.47□□□□□ -0.41
LRFN3-201ENST00000246529 SPANXA1Q9NS26 97 aa12.47□□□□□ -0.41
LRFN3-201ENST00000246529 SH2D6Q7Z4S9 175 aa12.47□□□□□ -0.41
LRFN3-201ENST00000246529 SPINK8P0C7L1 97 aa12.46□□□□□ -0.41
LRFN3-201ENST00000246529 NOP10Q9NPE3 64 aaKnown RBP12.46□□□□□ -0.41
LRFN3-201ENST00000246529 F8W1H4 67 aa12.46□□□□□ -0.42
LRFN3-201ENST00000246529 J3QKU1 62 aa12.46□□□□□ -0.42
LRFN3-201ENST00000246529 EIF4EBP3O60516 100 aaPredicted RBP12.46□□□□□ -0.42
LRFN3-201ENST00000246529 GAGE13Q4V321 117 aa12.46□□□□□ -0.42
LRFN3-201ENST00000246529 A0A0J9YXY3 114 aa12.45□□□□□ -0.42
LRFN3-201ENST00000246529 A4D1N5 150 aa12.45□□□□□ -0.42
LRFN3-201ENST00000246529 PRO0461Q9UI25 63 aa12.45□□□□□ -0.42
LRFN3-201ENST00000246529 FASNP49327 2511 aaKnown RBP12.45□□□□□ -0.42
LRFN3-201ENST00000246529 MUSTN1Q8IVN3 82 aa12.45□□□□□ -0.42
LRFN3-201ENST00000246529 PSMB2P49721 201 aa12.44□□□□□ -0.42
LRFN3-201ENST00000246529 CRYBA4P53673 196 aa12.44□□□□□ -0.42
LRFN3-201ENST00000246529 ETDBQ3ZM63 59 aa12.44□□□□□ -0.42
LRFN3-201ENST00000246529 LINC00694P0DN24 101 aa12.44□□□□□ -0.42
LRFN3-201ENST00000246529 TMEM263Q8WUH6 116 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms