RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 MUC7Q8TAX7 377 aa7.9□□□□□ -1.14
TNFAIP3-201ENST00000237289 C20orf78Q9BR46 151 aa7.9□□□□□ -1.14
TNFAIP3-201ENST00000237289 IGKV3OR2-268A0A0C4DH90 116 aa7.9□□□□□ -1.14
TNFAIP3-201ENST00000237289 P0DMU3 169 aa7.9□□□□□ -1.14
TNFAIP3-201ENST00000237289 FAM231AP0DMU4 169 aa7.9□□□□□ -1.14
TNFAIP3-201ENST00000237289 FAM231CP0DMU5 169 aa7.9□□□□□ -1.14
TNFAIP3-201ENST00000237289 CRYBA4P53673 196 aa7.9□□□□□ -1.14
TNFAIP3-201ENST00000237289 FHL2Q14192 279 aa7.9□□□□□ -1.14
TNFAIP3-201ENST00000237289 EREGO14944 169 aa7.9□□□□□ -1.15
TNFAIP3-201ENST00000237289 GATD1Q8NB37 220 aa7.9□□□□□ -1.15
TNFAIP3-201ENST00000237289 TRAV9-2A0A087WT02 112 aa7.89□□□□□ -1.15
TNFAIP3-201ENST00000237289 A0A1B0GXF2 115 aa7.89□□□□□ -1.15
TNFAIP3-201ENST00000237289 SPATA45Q537H7 98 aa7.89□□□□□ -1.15
TNFAIP3-201ENST00000237289 TMEM243Q9BU79 118 aa7.89□□□□□ -1.15
TNFAIP3-201ENST00000237289 CEMP1Q6PRD7 247 aaPredicted RBP7.89□□□□□ -1.15
TNFAIP3-201ENST00000237289 IGHV1-24A0A0C4DH33 117 aa7.89□□□□□ -1.15
TNFAIP3-201ENST00000237289 NXPH4O95158 308 aa7.89□□□□□ -1.15
TNFAIP3-201ENST00000237289 NPYP01303 97 aa7.89□□□□□ -1.15
TNFAIP3-201ENST00000237289 CRPP02741 224 aa7.89□□□□□ -1.15
TNFAIP3-201ENST00000237289 HIST3H2BBQ8N257 126 aa7.89□□□□□ -1.15
TNFAIP3-201ENST00000237289 PAPPA-AS1Q5QFB9 102 aa7.88□□□□□ -1.15
TNFAIP3-201ENST00000237289 CYSLTR1Q9Y271 337 aa7.88□□□□□ -1.15
TNFAIP3-201ENST00000237289 M0QY20 66 aa7.88□□□□□ -1.15
TNFAIP3-201ENST00000237289 LAGE3Q14657 143 aa7.88□□□□□ -1.15
TNFAIP3-201ENST00000237289 MAJINQ3KP22 176 aa7.88□□□□□ -1.15
TNFAIP3-201ENST00000237289 ZNF664Q8N3J9 261 aa7.88□□□□□ -1.15
TNFAIP3-201ENST00000237289 SMIM2Q9BVW6 85 aa7.88□□□□□ -1.15
TNFAIP3-201ENST00000237289 PLAC8L1A1L4L8 177 aa7.87□□□□□ -1.15
TNFAIP3-201ENST00000237289 K7ERU9 68 aa7.87□□□□□ -1.15
TNFAIP3-201ENST00000237289 PRSS1P07477 247 aa7.87□□□□□ -1.15
TNFAIP3-201ENST00000237289 IFI27P40305 119 aaPredicted RBP7.87□□□□□ -1.15
TNFAIP3-201ENST00000237289 NEXN-AS1Q8NBZ9 246 aa7.87□□□□□ -1.15
TNFAIP3-201ENST00000237289 GTSF1LQ9H1H1 148 aa7.87□□□□□ -1.15
TNFAIP3-201ENST00000237289 LOC100131303A0A0U1RQF7 123 aa7.87□□□□□ -1.15
TNFAIP3-201ENST00000237289 LINC00614P0C842 121 aa7.87□□□□□ -1.15
TNFAIP3-201ENST00000237289 GAGE6Q13070 117 aa7.87□□□□□ -1.15
TNFAIP3-201ENST00000237289 CUBNO60494 3623 aa7.87□□□□□ -1.15
TNFAIP3-201ENST00000237289 VWFP04275 2813 aa7.87□□□□□ -1.15
TNFAIP3-201ENST00000237289 JOSD1Q15040 202 aaPredicted RBP7.86□□□□□ -1.15
TNFAIP3-201ENST00000237289 OR5A1Q8NGJ0 315 aa7.86□□□□□ -1.15
TNFAIP3-201ENST00000237289 TMEM70Q9BUB7 260 aa7.86□□□□□ -1.15
TNFAIP3-201ENST00000237289 POM121L12Q8N7R1 296 aa7.86□□□□□ -1.15
TNFAIP3-201ENST00000237289 Q8N8P6 123 aa7.86□□□□□ -1.15
TNFAIP3-201ENST00000237289 C18orf15Q96N68 181 aa7.86□□□□□ -1.15
TNFAIP3-201ENST00000237289 SCGB3A1Q96QR1 104 aa7.86□□□□□ -1.15
TNFAIP3-201ENST00000237289 ALKBH7Q9BT30 221 aaPredicted RBP7.86□□□□□ -1.15
TNFAIP3-201ENST00000237289 DLEU1O43261 78 aa7.85□□□□□ -1.15
TNFAIP3-201ENST00000237289 NIT1Q86X76 327 aa7.85□□□□□ -1.15
TNFAIP3-201ENST00000237289 VSIG2Q96IQ7 327 aa7.85□□□□□ -1.15
TNFAIP3-201ENST00000237289 MUC4Q99102 2169 aa7.85□□□□□ -1.15
TNFAIP3-201ENST00000237289 LINC01549A6NIU2 74 aa7.85□□□□□ -1.15
TNFAIP3-201ENST00000237289 NPSP0C0P6 89 aa7.85□□□□□ -1.15
TNFAIP3-201ENST00000237289 RNF185Q96GF1 192 aa7.85□□□□□ -1.15
TNFAIP3-201ENST00000237289 LY6G6CO95867 125 aa7.84□□□□□ -1.15
TNFAIP3-201ENST00000237289 RAB37Q96AX2 223 aa7.84□□□□□ -1.15
TNFAIP3-201ENST00000237289 HSPB8Q9UJY1 196 aa7.84□□□□□ -1.15
TNFAIP3-201ENST00000237289 NBEAL2Q6ZNJ1 2754 aa7.84□□□□□ -1.15
TNFAIP3-201ENST00000237289 UQCR10Q9UDW1 63 aa7.84□□□□□ -1.15
TNFAIP3-201ENST00000237289 FAM19A2Q8N3H0 131 aa7.83□□□□□ -1.16
TNFAIP3-201ENST00000237289 C2orf88Q9BSF0 95 aa7.83□□□□□ -1.16
TNFAIP3-201ENST00000237289 ANGP03950 147 aaKnown RBP7.83□□□□□ -1.16
TNFAIP3-201ENST00000237289 Q6ZSN1 163 aa7.83□□□□□ -1.16
TNFAIP3-201ENST00000237289 VCX2Q9H322 139 aa7.83□□□□□ -1.16
TNFAIP3-201ENST00000237289 J3QR89 54 aa7.83□□□□□ -1.16
TNFAIP3-201ENST00000237289 LEPROTL1O95214 131 aa7.83□□□□□ -1.16
TNFAIP3-201ENST00000237289 IGHV3-30P01768 117 aa7.83□□□□□ -1.16
TNFAIP3-201ENST00000237289 IGHV3-33P01772 117 aa7.83□□□□□ -1.16
TNFAIP3-201ENST00000237289 IGHV3-30-3P0DP02 117 aa7.83□□□□□ -1.16
TNFAIP3-201ENST00000237289 IGHV3-30-5P0DP03 117 aa7.83□□□□□ -1.16
TNFAIP3-201ENST00000237289 LINC00612Q8N6U2 182 aa7.83□□□□□ -1.16
TNFAIP3-201ENST00000237289 C3orf84H3BNL1 204 aa7.83□□□□□ -1.16
TNFAIP3-201ENST00000237289 PSCAO43653 123 aa7.83□□□□□ -1.16
TNFAIP3-201ENST00000237289 HBDP02042 147 aa7.83□□□□□ -1.16
TNFAIP3-201ENST00000237289 C18orf32Q8TCD1 76 aa7.83□□□□□ -1.16
TNFAIP3-201ENST00000237289 CHCHD1Q96BP2 118 aaKnown RBP7.83□□□□□ -1.16
TNFAIP3-201ENST00000237289 SNHG12Q9BXW3 62 aa7.83□□□□□ -1.16
TNFAIP3-201ENST00000237289 EDA2RQ9HAV5 297 aa7.83□□□□□ -1.16
TNFAIP3-201ENST00000237289 GAGE10A6NGK3 116 aa7.82□□□□□ -1.16
TNFAIP3-201ENST00000237289 ATP5LO75964 103 aa7.82□□□□□ -1.16
TNFAIP3-201ENST00000237289 H3BNG1 76 aa7.82□□□□□ -1.16
TNFAIP3-201ENST00000237289 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.82□□□□□ -1.16
TNFAIP3-201ENST00000237289 KIF25-AS1Q9Y6Z4 181 aa7.82□□□□□ -1.16
TNFAIP3-201ENST00000237289 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.82□□□□□ -1.16
TNFAIP3-201ENST00000237289 IGKV2-29A2NJV5 120 aaPredicted RBP7.82□□□□□ -1.16
TNFAIP3-201ENST00000237289 UBE2D3P61077 147 aa7.82□□□□□ -1.16
TNFAIP3-201ENST00000237289 UBE2D2P62837 147 aa7.82□□□□□ -1.16
TNFAIP3-201ENST00000237289 MAP1LC3CQ9BXW4 147 aa7.81□□□□□ -1.16
TNFAIP3-201ENST00000237289 TRBV6-5A0A0K0K1A5 114 aa7.81□□□□□ -1.16
TNFAIP3-201ENST00000237289 K7EMI3 77 aa7.81□□□□□ -1.16
TNFAIP3-201ENST00000237289 LELP1Q5T871 98 aa7.81□□□□□ -1.16
TNFAIP3-201ENST00000237289 C2orf66Q6UXQ4 117 aa7.81□□□□□ -1.16
TNFAIP3-201ENST00000237289 TRBV6-8A0A0A6YYG3 113 aa7.81□□□□□ -1.16
TNFAIP3-201ENST00000237289 SERF1AO75920 110 aa7.81□□□□□ -1.16
TNFAIP3-201ENST00000237289 SIVA1O15304 175 aa7.8□□□□□ -1.16
TNFAIP3-201ENST00000237289 RMI2Q96E14 147 aa7.8□□□□□ -1.16
TNFAIP3-201ENST00000237289 MIEN1Q9BRT3 115 aa7.8□□□□□ -1.16
TNFAIP3-201ENST00000237289 GEMIN7Q9H840 131 aaKnown RBP7.8□□□□□ -1.16
TNFAIP3-201ENST00000237289 UBE2WQ96B02 151 aa7.8□□□□□ -1.16
TNFAIP3-201ENST00000237289 TRRAPQ9Y4A5 3859 aa7.79□□□□□ -1.16
TNFAIP3-201ENST00000237289 TEX43Q6ZNM6 134 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms