RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 ANKRD17O75179 2603 aaKnown RBP10.35□□□□□ -0.75
NFKB1-201ENST00000226574 IGHG2P01859 326 aa10.35□□□□□ -0.75
NFKB1-201ENST00000226574 TMEM61Q8N0U2 210 aa10.35□□□□□ -0.75
NFKB1-201ENST00000226574 Q96MF0 132 aa10.35□□□□□ -0.75
NFKB1-201ENST00000226574 SPTBN5Q9NRC6 3674 aaKnown RBP10.35□□□□□ -0.75
NFKB1-201ENST00000226574 A0A0J9YY99 117 aa10.34□□□□□ -0.75
NFKB1-201ENST00000226574 RNF183Q96D59 192 aa10.34□□□□□ -0.75
NFKB1-201ENST00000226574 TMEM243Q9BU79 118 aa10.34□□□□□ -0.75
NFKB1-201ENST00000226574 MRPS12O15235 138 aaKnown RBP10.34□□□□□ -0.75
NFKB1-201ENST00000226574 XCL1P47992 114 aa10.34□□□□□ -0.75
NFKB1-201ENST00000226574 BAALC-AS2P0C853 105 aa10.33□□□□□ -0.76
NFKB1-201ENST00000226574 TIMM17AQ99595 171 aa10.33□□□□□ -0.76
NFKB1-201ENST00000226574 ICOSQ9Y6W8 199 aa10.33□□□□□ -0.76
NFKB1-201ENST00000226574 ADGRG4Q8IZF6 3080 aa10.33□□□□□ -0.76
NFKB1-201ENST00000226574 AKAP13Q12802 2813 aa10.33□□□□□ -0.76
NFKB1-201ENST00000226574 MRGPRG-AS1Q2M3A8 158 aa10.33□□□□□ -0.76
NFKB1-201ENST00000226574 A0A0J9YX75 114 aa10.33□□□□□ -0.76
NFKB1-201ENST00000226574 F8W735 103 aaPredicted RBP10.33□□□□□ -0.76
NFKB1-201ENST00000226574 Q6ZUT4 128 aa10.33□□□□□ -0.76
NFKB1-201ENST00000226574 MUC4Q99102 2169 aa10.32□□□□□ -0.76
NFKB1-201ENST00000226574 TNFRSF13BO14836 293 aaPredicted RBP10.32□□□□□ -0.76
NFKB1-201ENST00000226574 RNASE3P12724 160 aaKnown RBP10.32□□□□□ -0.76
NFKB1-201ENST00000226574 DSCR9P59020 149 aa10.32□□□□□ -0.76
NFKB1-201ENST00000226574 C10orf105Q8TEF2 133 aa10.32□□□□□ -0.76
NFKB1-201ENST00000226574 IGLV10-54A0A075B6I4 117 aa10.31□□□□□ -0.76
NFKB1-201ENST00000226574 CLPSL1A2RUU4 121 aa10.31□□□□□ -0.76
NFKB1-201ENST00000226574 ELANEP08246 267 aa10.31□□□□□ -0.76
NFKB1-201ENST00000226574 VPREB3Q9UKI3 123 aa10.31□□□□□ -0.76
NFKB1-201ENST00000226574 UFSP1Q6NVU6 142 aa10.3□□□□□ -0.76
NFKB1-201ENST00000226574 CDKN2A-AS1Q9UH64 79 aa10.3□□□□□ -0.76
NFKB1-201ENST00000226574 KALRNO60229 2985 aa10.3□□□□□ -0.76
NFKB1-201ENST00000226574 HERVK_113P63121 156 aa10.3□□□□□ -0.76
NFKB1-201ENST00000226574 FBXL19-AS1Q494R0 122 aa10.3□□□□□ -0.76
NFKB1-201ENST00000226574 Q9HAA7 133 aa10.3□□□□□ -0.76
NFKB1-201ENST00000226574 FLNBO75369 2602 aaKnown RBP10.29□□□□□ -0.76
NFKB1-201ENST00000226574 A0A0J9YXY3 114 aa10.29□□□□□ -0.76
NFKB1-201ENST00000226574 SLC25A29Q8N8R3 303 aa10.29□□□□□ -0.76
NFKB1-201ENST00000226574 IGKV3D-7A0A0C4DH55 119 aa10.29□□□□□ -0.76
NFKB1-201ENST00000226574 A0A1W2PPR1 153 aa10.29□□□□□ -0.76
NFKB1-201ENST00000226574 H3BUA1 57 aa10.29□□□□□ -0.76
NFKB1-201ENST00000226574 EBI3Q14213 229 aa10.28□□□□□ -0.76
NFKB1-201ENST00000226574 ZNF22P17026 224 aaPredicted RBP10.28□□□□□ -0.76
NFKB1-201ENST00000226574 F8P00451 2351 aa10.28□□□□□ -0.76
NFKB1-201ENST00000226574 GATA3P23771 443 aa10.28□□□□□ -0.76
NFKB1-201ENST00000226574 FAM236AA0A1B0GUQ0 79 aa10.28□□□□□ -0.76
NFKB1-201ENST00000226574 FAM236BA0A1B0GV22 79 aa10.28□□□□□ -0.76
NFKB1-201ENST00000226574 HAMPP81172 84 aa10.28□□□□□ -0.76
NFKB1-201ENST00000226574 SRSF2Q01130 221 aaKnown RBP10.28□□□□□ -0.76
NFKB1-201ENST00000226574 NFE4Q86UQ8 179 aa10.27□□□□□ -0.77
NFKB1-201ENST00000226574 GPHB5Q86YW7 130 aa10.27□□□□□ -0.77
NFKB1-201ENST00000226574 LGALS9O00182 355 aa10.27□□□□□ -0.77
NFKB1-201ENST00000226574 SS18Q15532 418 aa10.27□□□□□ -0.77
NFKB1-201ENST00000226574 Q8N6K4 173 aa10.27□□□□□ -0.77
NFKB1-201ENST00000226574 SPANXA1Q9NS26 97 aa10.26□□□□□ -0.77
NFKB1-201ENST00000226574 IGLV4-3A0A075B6K6 122 aa10.26□□□□□ -0.77
NFKB1-201ENST00000226574 F5H768 121 aa10.26□□□□□ -0.77
NFKB1-201ENST00000226574 SND1-IT1Q9HBX3 110 aa10.26□□□□□ -0.77
NFKB1-201ENST00000226574 ZNF580Q9UK33 172 aa10.26□□□□□ -0.77
NFKB1-201ENST00000226574 RAI1Q7Z5J4 1906 aaPredicted RBP10.26□□□□□ -0.77
NFKB1-201ENST00000226574 TRBV7-3A0A075B6L6 115 aa10.26□□□□□ -0.77
NFKB1-201ENST00000226574 IGHV1-58A0A0C4DH39 117 aa10.26□□□□□ -0.77
NFKB1-201ENST00000226574 A6NDX4 124 aa10.26□□□□□ -0.77
NFKB1-201ENST00000226574 M0QY20 66 aa10.26□□□□□ -0.77
NFKB1-201ENST00000226574 IGHG4P01861 327 aa10.26□□□□□ -0.77
NFKB1-201ENST00000226574 ANGP03950 147 aaKnown RBP10.26□□□□□ -0.77
NFKB1-201ENST00000226574 ATP5G1P05496 136 aa10.26□□□□□ -0.77
NFKB1-201ENST00000226574 INAFM2P0DMQ5 153 aa10.26□□□□□ -0.77
NFKB1-201ENST00000226574 XGP55808 180 aa10.26□□□□□ -0.77
NFKB1-201ENST00000226574 SOCS3O14543 225 aa10.25□□□□□ -0.77
NFKB1-201ENST00000226574 DEFB4AO15263 64 aa10.25□□□□□ -0.77
NFKB1-201ENST00000226574 CRLF1O75462 422 aa10.25□□□□□ -0.77
NFKB1-201ENST00000226574 VSIG2Q96IQ7 327 aa10.25□□□□□ -0.77
NFKB1-201ENST00000226574 Q6ZSV7 163 aa10.25□□□□□ -0.77
NFKB1-201ENST00000226574 TRBV10-2A0A0K0K1G8 114 aa10.25□□□□□ -0.77
NFKB1-201ENST00000226574 LINC00467Q9BRT7 94 aa10.25□□□□□ -0.77
NFKB1-201ENST00000226574 TRIAP1O43715 76 aa10.24□□□□□ -0.77
NFKB1-201ENST00000226574 IGHV3-33P01772 117 aa10.24□□□□□ -0.77
NFKB1-201ENST00000226574 DPH3Q96FX2 82 aa10.24□□□□□ -0.77
NFKB1-201ENST00000226574 K7EMT4 169 aa10.24□□□□□ -0.77
NFKB1-201ENST00000226574 CCL24O00175 119 aa10.24□□□□□ -0.77
NFKB1-201ENST00000226574 CLUHP3Q96NS8 147 aa10.24□□□□□ -0.77
NFKB1-201ENST00000226574 DMXL2Q8TDJ6 3036 aa10.24□□□□□ -0.77
NFKB1-201ENST00000226574 MIR7-3HGQ8N6C7 128 aa10.23□□□□□ -0.77
NFKB1-201ENST00000226574 PIK3CD-AS1Q5SR53 167 aa10.23□□□□□ -0.77
NFKB1-201ENST00000226574 C11orf71Q6IPW1 123 aa10.23□□□□□ -0.77
NFKB1-201ENST00000226574 Q6ZTI0 123 aa10.23□□□□□ -0.77
NFKB1-201ENST00000226574 PIFOQ8TCI5 191 aa10.23□□□□□ -0.77
NFKB1-201ENST00000226574 CNFNQ9BYD5 112 aa10.23□□□□□ -0.77
NFKB1-201ENST00000226574 IGHV4-4A0A075B6R2 117 aa10.23□□□□□ -0.77
NFKB1-201ENST00000226574 TRAV4A0A0B4J268 109 aa10.23□□□□□ -0.77
NFKB1-201ENST00000226574 CRIP2P52943 208 aaPredicted RBP10.23□□□□□ -0.77
NFKB1-201ENST00000226574 CFAP126Q5VTH2 177 aa10.23□□□□□ -0.77
NFKB1-201ENST00000226574 MED14OSP0DP75 135 aa10.22□□□□□ -0.77
NFKB1-201ENST00000226574 K7EQG2 157 aa10.22□□□□□ -0.77
NFKB1-201ENST00000226574 IGHV3-30P01768 117 aa10.22□□□□□ -0.77
NFKB1-201ENST00000226574 IGHV3-30-5P0DP03 117 aa10.22□□□□□ -0.77
NFKB1-201ENST00000226574 POLR2KP53803 58 aaKnown RBP10.22□□□□□ -0.77
NFKB1-201ENST00000226574 LECT2O14960 151 aa10.21□□□□□ -0.77
NFKB1-201ENST00000226574 TACC2O95359 2948 aa10.21□□□□□ -0.77
NFKB1-201ENST00000226574 TRAV13-2A0A0B4J235 113 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms