RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 ODF3Q96PU9 254 aa9.95□□□□□ -0.82
COL1A1-201ENST00000225964 HIGD1BQ9P298 99 aa9.95□□□□□ -0.82
COL1A1-201ENST00000225964 TRAV23DV6A0A075B6W5 121 aa9.95□□□□□ -0.82
COL1A1-201ENST00000225964 PDE6GP18545 87 aa9.95□□□□□ -0.82
COL1A1-201ENST00000225964 SCXQ7RTU7 201 aa9.95□□□□□ -0.82
COL1A1-201ENST00000225964 NEXN-AS1Q8NBZ9 246 aa9.95□□□□□ -0.82
COL1A1-201ENST00000225964 H7C423 109 aa9.94□□□□□ -0.82
COL1A1-201ENST00000225964 TDRG1Q3Y452 100 aa9.94□□□□□ -0.82
COL1A1-201ENST00000225964 DCANP1Q8TF63 244 aa9.93□□□□□ -0.82
COL1A1-201ENST00000225964 A0A0J9YXY3 114 aa9.93□□□□□ -0.82
COL1A1-201ENST00000225964 UBE2D3P61077 147 aa9.93□□□□□ -0.82
COL1A1-201ENST00000225964 PPDPFQ9H3Y8 114 aa9.93□□□□□ -0.82
COL1A1-201ENST00000225964 SLPIP03973 132 aa9.93□□□□□ -0.82
COL1A1-201ENST00000225964 K7EQG2 157 aa9.93□□□□□ -0.82
COL1A1-201ENST00000225964 SPINK6Q6UWN8 80 aa9.93□□□□□ -0.82
COL1A1-201ENST00000225964 A0A0J9YWU9 116 aa9.93□□□□□ -0.82
COL1A1-201ENST00000225964 MED13Q9UHV7 2174 aa9.92□□□□□ -0.82
COL1A1-201ENST00000225964 PLA2G2EQ9NZK7 142 aa9.92□□□□□ -0.82
COL1A1-201ENST00000225964 IGF1P05019 195 aa9.92□□□□□ -0.82
COL1A1-201ENST00000225964 C10orf99Q6UWK7 81 aa9.92□□□□□ -0.82
COL1A1-201ENST00000225964 C19orf71A6NCJ1 209 aa9.92□□□□□ -0.82
COL1A1-201ENST00000225964 XAGE1AQ9HD64 81 aa9.92□□□□□ -0.82
COL1A1-201ENST00000225964 H3BT86 120 aa9.91□□□□□ -0.82
COL1A1-201ENST00000225964 CFAP126Q5VTH2 177 aa9.91□□□□□ -0.82
COL1A1-201ENST00000225964 BBC3Q96PG8 261 aaPredicted RBP9.91□□□□□ -0.82
COL1A1-201ENST00000225964 COL4A4P53420 1690 aaPredicted RBP9.91□□□□□ -0.82
COL1A1-201ENST00000225964 C9orf85Q96MD7 179 aa9.91□□□□□ -0.82
COL1A1-201ENST00000225964 ABCA1O95477 2261 aa9.91□□□□□ -0.82
COL1A1-201ENST00000225964 TRBV6-8A0A0A6YYG3 113 aa9.91□□□□□ -0.82
COL1A1-201ENST00000225964 IGKV2-28A0A075B6P5 120 aa9.9□□□□□ -0.82
COL1A1-201ENST00000225964 IGKV2D-28P01615 120 aa9.9□□□□□ -0.82
COL1A1-201ENST00000225964 GDF5OSQ5U4N7 250 aa9.9□□□□□ -0.82
COL1A1-201ENST00000225964 MALRD1Q5VYJ5 2156 aa9.9□□□□□ -0.82
COL1A1-201ENST00000225964 FRMD6-AS1P0C7T7 363 aa9.9□□□□□ -0.82
COL1A1-201ENST00000225964 SYCNQ0VAF6 134 aa9.9□□□□□ -0.83
COL1A1-201ENST00000225964 PROK1P58294 105 aa9.89□□□□□ -0.83
COL1A1-201ENST00000225964 TCL1BO95988 128 aa9.89□□□□□ -0.83
COL1A1-201ENST00000225964 K7ERS5 55 aa9.89□□□□□ -0.83
COL1A1-201ENST00000225964 TEX49A0A1B0GTD5 131 aa9.89□□□□□ -0.83
COL1A1-201ENST00000225964 SPTSSBQ8NFR3 76 aa9.89□□□□□ -0.83
COL1A1-201ENST00000225964 ZNF706Q9Y5V0 76 aaPredicted RBP9.89□□□□□ -0.83
COL1A1-201ENST00000225964 NUP210LQ5VU65 1888 aa9.89□□□□□ -0.83
COL1A1-201ENST00000225964 ROS1P08922 2347 aa9.89□□□□□ -0.83
COL1A1-201ENST00000225964 COL4A3Q01955 1670 aa9.88□□□□□ -0.83
COL1A1-201ENST00000225964 IGLV9-49A0A0B4J1Y8 123 aa9.88□□□□□ -0.83
COL1A1-201ENST00000225964 J3KT08 172 aa9.88□□□□□ -0.83
COL1A1-201ENST00000225964 C18orf65Q6ZTR6 163 aa9.88□□□□□ -0.83
COL1A1-201ENST00000225964 C3orf22Q8N5N4 141 aa9.88□□□□□ -0.83
COL1A1-201ENST00000225964 PTH2Q96A98 100 aa9.88□□□□□ -0.83
COL1A1-201ENST00000225964 KPRPQ5T749 579 aaPredicted RBP9.88□□□□□ -0.83
COL1A1-201ENST00000225964 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.87□□□□□ -0.83
COL1A1-201ENST00000225964 PIK3CD-AS1Q5SR53 167 aa9.87□□□□□ -0.83
COL1A1-201ENST00000225964 CLUHP3Q96NS8 147 aa9.87□□□□□ -0.83
COL1A1-201ENST00000225964 ZNF702PQ9H963 129 aa9.87□□□□□ -0.83
COL1A1-201ENST00000225964 CDKN2A-AS1Q9UH64 79 aa9.87□□□□□ -0.83
COL1A1-201ENST00000225964 MPLKIPQ8TAP9 179 aa9.87□□□□□ -0.83
COL1A1-201ENST00000225964 BRK1Q8WUW1 75 aa9.87□□□□□ -0.83
COL1A1-201ENST00000225964 CREBBPQ92793 2442 aa9.87□□□□□ -0.83
COL1A1-201ENST00000225964 C1orf158Q8N1D5 194 aa9.87□□□□□ -0.83
COL1A1-201ENST00000225964 WFDC10AQ9H1F0 79 aa9.87□□□□□ -0.83
COL1A1-201ENST00000225964 LY6LH3BQJ8 138 aa9.86□□□□□ -0.83
COL1A1-201ENST00000225964 SDIM1Q6ZPB5 146 aa9.86□□□□□ -0.83
COL1A1-201ENST00000225964 SPANXB1Q9NS25 103 aaPredicted RBP9.86□□□□□ -0.83
COL1A1-201ENST00000225964 TMEM223A0PJW6 202 aa9.86□□□□□ -0.83
COL1A1-201ENST00000225964 TAX1BP3O14907 124 aa9.86□□□□□ -0.83
COL1A1-201ENST00000225964 NANOS2P60321 138 aaKnown RBP9.86□□□□□ -0.83
COL1A1-201ENST00000225964 LINC00322Q6ZN03 302 aaPredicted RBP9.86□□□□□ -0.83
COL1A1-201ENST00000225964 LINC00526Q96FQ7 95 aa9.85□□□□□ -0.83
COL1A1-201ENST00000225964 IGLV4-3A0A075B6K6 122 aa9.85□□□□□ -0.83
COL1A1-201ENST00000225964 RPL37AP8A6NKH3 93 aa9.85□□□□□ -0.83
COL1A1-201ENST00000225964 C3orf84H3BNL1 204 aa9.85□□□□□ -0.83
COL1A1-201ENST00000225964 TRBV6-4A0A1B0GX49 114 aa9.85□□□□□ -0.83
COL1A1-201ENST00000225964 ARHGAP21Q5T5U3 1957 aa9.85□□□□□ -0.83
COL1A1-201ENST00000225964 Q8N976 141 aa9.85□□□□□ -0.83
COL1A1-201ENST00000225964 MLST8Q9BVC4 326 aa9.85□□□□□ -0.83
COL1A1-201ENST00000225964 CEP192Q8TEP8 1941 aa9.84□□□□□ -0.83
COL1A1-201ENST00000225964 LOC100131303A0A0U1RQF7 123 aa9.84□□□□□ -0.83
COL1A1-201ENST00000225964 PLAC8L1A1L4L8 177 aa9.84□□□□□ -0.83
COL1A1-201ENST00000225964 COA6Q5JTJ3 125 aaKnown RBP9.84□□□□□ -0.83
COL1A1-201ENST00000225964 C11orf71Q6IPW1 123 aa9.84□□□□□ -0.83
COL1A1-201ENST00000225964 ENHOQ6UWT2 76 aa9.84□□□□□ -0.83
COL1A1-201ENST00000225964 C22orf34Q6ZV56 151 aa9.84□□□□□ -0.83
COL1A1-201ENST00000225964 PLA2G2AP14555 144 aa9.84□□□□□ -0.83
COL1A1-201ENST00000225964 NCOA6Q14686 2063 aaPredicted RBP9.84□□□□□ -0.83
COL1A1-201ENST00000225964 IBA57-AS1B1ANH7 110 aa9.84□□□□□ -0.83
COL1A1-201ENST00000225964 LTBP2Q14767 1821 aa9.84□□□□□ -0.83
COL1A1-201ENST00000225964 UBE2D2P62837 147 aa9.84□□□□□ -0.83
COL1A1-201ENST00000225964 LOC107984640A0A0U1RRK4 108 aa9.83□□□□□ -0.84
COL1A1-201ENST00000225964 C1orf229Q6ZS94 237 aaPredicted RBP9.83□□□□□ -0.84
COL1A1-201ENST00000225964 LINC01006Q8NI28 216 aa9.83□□□□□ -0.84
COL1A1-201ENST00000225964 PSMG3-AS1Q96PY0 264 aa9.83□□□□□ -0.84
COL1A1-201ENST00000225964 PRR15LQ9BU68 103 aa9.82□□□□□ -0.84
COL1A1-201ENST00000225964 LINC00643Q86TS7 51 aa9.82□□□□□ -0.84
COL1A1-201ENST00000225964 IGLC6P0CF74 106 aa9.82□□□□□ -0.84
COL1A1-201ENST00000225964 IGLV4-69A0A075B6H9 119 aa9.82□□□□□ -0.84
COL1A1-201ENST00000225964 ZFAND3Q9H8U3 227 aa9.82□□□□□ -0.84
COL1A1-201ENST00000225964 KIAA1549Q9HCM3 1950 aa9.81□□□□□ -0.84
COL1A1-201ENST00000225964 ZNF22P17026 224 aaPredicted RBP9.81□□□□□ -0.84
COL1A1-201ENST00000225964 LYPD6Q86Y78 171 aa9.81□□□□□ -0.84
COL1A1-201ENST00000225964 PCNX1Q96RV3 2341 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms