RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 PKIAP61925 76 aa12.57□□□□□ -0.4
TRAPPC6A-201ENST00000006275 RIGQ13278 110 aa12.57□□□□□ -0.4
TRAPPC6A-201ENST00000006275 NTN5Q8WTR8 489 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC6A-201ENST00000006275 IGHV1-24A0A0C4DH33 117 aa12.56□□□□□ -0.4
TRAPPC6A-201ENST00000006275 IFITM2Q01629 132 aa12.56□□□□□ -0.4
TRAPPC6A-201ENST00000006275 TMEM191AQ9H0A3 160 aa12.56□□□□□ -0.4
TRAPPC6A-201ENST00000006275 GAGE6Q13070 117 aa12.55□□□□□ -0.4
TRAPPC6A-201ENST00000006275 IQCJQ1A5X6 159 aa12.55□□□□□ -0.4
TRAPPC6A-201ENST00000006275 MPV17L2Q567V2 206 aa12.55□□□□□ -0.4
TRAPPC6A-201ENST00000006275 UBE2WQ96B02 151 aa12.55□□□□□ -0.4
TRAPPC6A-201ENST00000006275 RPL39LQ96EH5 51 aaKnown RBP12.55□□□□□ -0.4
TRAPPC6A-201ENST00000006275 FAM30AQ9NZY2 134 aa12.55□□□□□ -0.4
TRAPPC6A-201ENST00000006275 SMIM27A0A1W2PRY6 76 aa12.54□□□□□ -0.4
TRAPPC6A-201ENST00000006275 ATRAIDQ6UW56 229 aa12.54□□□□□ -0.4
TRAPPC6A-201ENST00000006275 DEFB104AQ8WTQ1 72 aa12.54□□□□□ -0.4
TRAPPC6A-201ENST00000006275 RMI2Q96E14 147 aa12.54□□□□□ -0.4
TRAPPC6A-201ENST00000006275 ANGP03950 147 aaKnown RBP12.53□□□□□ -0.4
TRAPPC6A-201ENST00000006275 COTL1Q14019 142 aa12.53□□□□□ -0.4
TRAPPC6A-201ENST00000006275 AMN1Q8IY45 258 aa12.52□□□□□ -0.41
TRAPPC6A-201ENST00000006275 LINC00528Q8N1L1 170 aa12.52□□□□□ -0.41
TRAPPC6A-201ENST00000006275 Q8N976 141 aa12.52□□□□□ -0.41
TRAPPC6A-201ENST00000006275 RNF185Q96GF1 192 aa12.52□□□□□ -0.41
TRAPPC6A-201ENST00000006275 TMEM243Q9BU79 118 aa12.52□□□□□ -0.41
TRAPPC6A-201ENST00000006275 COX11Q9Y6N1 276 aa12.52□□□□□ -0.41
TRAPPC6A-201ENST00000006275 IGKV2D-24A0A075B6R9 120 aa12.51□□□□□ -0.41
TRAPPC6A-201ENST00000006275 LRCOL1A6NCL2 159 aa12.51□□□□□ -0.41
TRAPPC6A-201ENST00000006275 CRPP02741 224 aa12.51□□□□□ -0.41
TRAPPC6A-201ENST00000006275 RAB4AP20338 218 aa12.51□□□□□ -0.41
TRAPPC6A-201ENST00000006275 Q0VG73 95 aa12.51□□□□□ -0.41
TRAPPC6A-201ENST00000006275 HMCN2Q8NDA2 5059 aa12.51□□□□□ -0.41
TRAPPC6A-201ENST00000006275 SDHAF1A6NFY7 115 aa12.5□□□□□ -0.41
TRAPPC6A-201ENST00000006275 AMTP48728 403 aa12.5□□□□□ -0.41
TRAPPC6A-201ENST00000006275 RBX1P62877 108 aa12.5□□□□□ -0.41
TRAPPC6A-201ENST00000006275 PNRC1Q12796 327 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC6A-201ENST00000006275 Q8N814 137 aa12.5□□□□□ -0.41
TRAPPC6A-201ENST00000006275 MRAP2Q96G30 205 aa12.5□□□□□ -0.41
TRAPPC6A-201ENST00000006275 PLA2G2DQ9UNK4 145 aa12.5□□□□□ -0.41
TRAPPC6A-201ENST00000006275 UBE2L6O14933 153 aa12.49□□□□□ -0.41
TRAPPC6A-201ENST00000006275 PPP1R2P9O14990 202 aa12.49□□□□□ -0.41
TRAPPC6A-201ENST00000006275 GAS8-AS1O95177 125 aa12.49□□□□□ -0.41
TRAPPC6A-201ENST00000006275 TRBV6-5A0A0K0K1A5 114 aa12.48□□□□□ -0.41
TRAPPC6A-201ENST00000006275 A0A1B0GW15 77 aa12.48□□□□□ -0.41
TRAPPC6A-201ENST00000006275 CAMPP49913 170 aa12.48□□□□□ -0.41
TRAPPC6A-201ENST00000006275 ENHOQ6UWT2 76 aa12.48□□□□□ -0.41
TRAPPC6A-201ENST00000006275 ST20Q9HBF5 79 aa12.48□□□□□ -0.41
TRAPPC6A-201ENST00000006275 NCR2O95944 276 aa12.47□□□□□ -0.41
TRAPPC6A-201ENST00000006275 PMCHP20382 165 aa12.47□□□□□ -0.41
TRAPPC6A-201ENST00000006275 MRPL54Q6P161 138 aaKnown RBP12.47□□□□□ -0.41
TRAPPC6A-201ENST00000006275 UQCC3Q6UW78 93 aa12.47□□□□□ -0.41
TRAPPC6A-201ENST00000006275 C1orf43Q9BWL3 253 aa12.47□□□□□ -0.41
TRAPPC6A-201ENST00000006275 APCSP02743 223 aa12.46□□□□□ -0.41
TRAPPC6A-201ENST00000006275 RPS10P46783 165 aaKnown RBP12.46□□□□□ -0.41
TRAPPC6A-201ENST00000006275 FAM104BQ5XKR9 115 aa12.46□□□□□ -0.41
TRAPPC6A-201ENST00000006275 A0A1B0GUV1 79 aa12.45□□□□□ -0.42
TRAPPC6A-201ENST00000006275 SMKR1H3BMG3 65 aa12.45□□□□□ -0.42
TRAPPC6A-201ENST00000006275 I3L3M4 83 aa12.45□□□□□ -0.42
TRAPPC6A-201ENST00000006275 MT-ND4LP03901 98 aa12.45□□□□□ -0.42
TRAPPC6A-201ENST00000006275 S100A8P05109 93 aa12.45□□□□□ -0.42
TRAPPC6A-201ENST00000006275 CLPSL2Q6UWE3 100 aa12.45□□□□□ -0.42
TRAPPC6A-201ENST00000006275 LINC00269Q8N2A0 174 aa12.45□□□□□ -0.42
TRAPPC6A-201ENST00000006275 BAALCQ8WXS3 180 aa12.45□□□□□ -0.42
TRAPPC6A-201ENST00000006275 ANAPC16Q96DE5 110 aa12.45□□□□□ -0.42
TRAPPC6A-201ENST00000006275 LECT2O14960 151 aa12.44□□□□□ -0.42
TRAPPC6A-201ENST00000006275 HBBP68871 147 aa12.44□□□□□ -0.42
TRAPPC6A-201ENST00000006275 WFDC2Q14508 124 aa12.44□□□□□ -0.42
TRAPPC6A-201ENST00000006275 MIAQ16674 131 aa12.44□□□□□ -0.42
TRAPPC6A-201ENST00000006275 MRPL51Q4U2R6 128 aaKnown RBP12.44□□□□□ -0.42
TRAPPC6A-201ENST00000006275 C20orf203Q8NBC4 194 aa12.44□□□□□ -0.42
TRAPPC6A-201ENST00000006275 PRR34Q9NV39 138 aa12.44□□□□□ -0.42
TRAPPC6A-201ENST00000006275 IGLV4-60A0A075B6I1 120 aa12.43□□□□□ -0.42
TRAPPC6A-201ENST00000006275 PPP1R17O96001 155 aa12.43□□□□□ -0.42
TRAPPC6A-201ENST00000006275 A0A1B0GXF2 115 aa12.42□□□□□ -0.42
TRAPPC6A-201ENST00000006275 TMEM218A2RU14 115 aa12.42□□□□□ -0.42
TRAPPC6A-201ENST00000006275 F8W036 122 aa12.42□□□□□ -0.42
TRAPPC6A-201ENST00000006275 POLR2KP53803 58 aaKnown RBP12.42□□□□□ -0.42
TRAPPC6A-201ENST00000006275 REG3AQ06141 175 aa12.42□□□□□ -0.42
TRAPPC6A-201ENST00000006275 Q6ZSA8 131 aa12.42□□□□□ -0.42
TRAPPC6A-201ENST00000006275 TMEM242Q9NWH2 141 aa12.42□□□□□ -0.42
TRAPPC6A-201ENST00000006275 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC6A-201ENST00000006275 IGKV2-29A2NJV5 120 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC6A-201ENST00000006275 ADCYAP1P18509 176 aa12.41□□□□□ -0.42
TRAPPC6A-201ENST00000006275 AMMECR1LQ6DCA0 310 aa12.41□□□□□ -0.42
TRAPPC6A-201ENST00000006275 ATP5L2Q7Z4Y8 100 aa12.41□□□□□ -0.42
TRAPPC6A-201ENST00000006275 COMMD7Q86VX2 200 aa12.41□□□□□ -0.42
TRAPPC6A-201ENST00000006275 NRACQ8N912 160 aa12.41□□□□□ -0.42
TRAPPC6A-201ENST00000006275 LRP1Q07954 4544 aaKnown RBP12.4□□□□□ -0.42
TRAPPC6A-201ENST00000006275 TRBV27A0A0K0K1C4 114 aa12.4□□□□□ -0.42
TRAPPC6A-201ENST00000006275 LINC00862A6NCI5 91 aa12.4□□□□□ -0.42
TRAPPC6A-201ENST00000006275 H7C423 109 aa12.4□□□□□ -0.42
TRAPPC6A-201ENST00000006275 OXTP01178 125 aa12.4□□□□□ -0.42
TRAPPC6A-201ENST00000006275 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC6A-201ENST00000006275 VCYO14598 125 aa12.39□□□□□ -0.43
TRAPPC6A-201ENST00000006275 TSHBP01222 138 aa12.39□□□□□ -0.43
TRAPPC6A-201ENST00000006275 HLA-DQA1P01909 254 aa12.39□□□□□ -0.43
TRAPPC6A-201ENST00000006275 CKS2P33552 79 aa12.39□□□□□ -0.43
TRAPPC6A-201ENST00000006275 SUMO2P61956 95 aaKnown RBP12.39□□□□□ -0.43
TRAPPC6A-201ENST00000006275 RNASEKQ6P5S7 137 aaKnown RBP12.39□□□□□ -0.43
TRAPPC6A-201ENST00000006275 FGF6P10767 208 aa12.38□□□□□ -0.43
TRAPPC6A-201ENST00000006275 IGLV10-54A0A075B6I4 117 aa12.37□□□□□ -0.43
TRAPPC6A-201ENST00000006275 TRAV8-4A0A0B4J246 113 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms