RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 C3orf84H3BNL1 204 aa9.11□□□□□ -0.95
PHGDH-220ENST00000641570 UFSP1Q6NVU6 142 aa9.11□□□□□ -0.95
PHGDH-220ENST00000641570 UBE2DNLQ8IWF7 75 aa9.11□□□□□ -0.95
PHGDH-220ENST00000641570 GATD1Q8NB37 220 aa9.11□□□□□ -0.95
PHGDH-220ENST00000641570 ZNRF2Q8NHG8 242 aa9.11□□□□□ -0.95
PHGDH-220ENST00000641570 PRELID3AQ96N28 172 aa9.11□□□□□ -0.95
PHGDH-220ENST00000641570 LAMTOR2Q9Y2Q5 125 aa9.11□□□□□ -0.95
PHGDH-220ENST00000641570 KIF25-AS1Q9Y6Z4 181 aa9.11□□□□□ -0.95
PHGDH-220ENST00000641570 PRKDCP78527 4128 aaKnown RBP9.11□□□□□ -0.95
PHGDH-220ENST00000641570 TRBV7-3A0A075B6L6 115 aa9.1□□□□□ -0.95
PHGDH-220ENST00000641570 RAB5AP20339 215 aa9.1□□□□□ -0.95
PHGDH-220ENST00000641570 TMEM97Q5BJF2 176 aa9.1□□□□□ -0.95
PHGDH-220ENST00000641570 MAP1LC3AQ9H492 121 aa9.1□□□□□ -0.95
PHGDH-220ENST00000641570 SMKR1H3BMG3 65 aa9.09□□□□□ -0.95
PHGDH-220ENST00000641570 M0QY20 66 aa9.09□□□□□ -0.95
PHGDH-220ENST00000641570 FCER1GP30273 86 aa9.09□□□□□ -0.95
PHGDH-220ENST00000641570 CCL18P55774 89 aa9.09□□□□□ -0.95
PHGDH-220ENST00000641570 NEGR1Q7Z3B1 354 aa9.09□□□□□ -0.95
PHGDH-220ENST00000641570 DAZ4Q86SG3 579 aaKnown RBP9.09□□□□□ -0.95
PHGDH-220ENST00000641570 ATP6V0E2Q8NHE4 81 aa9.09□□□□□ -0.95
PHGDH-220ENST00000641570 RNF185Q96GF1 192 aa9.09□□□□□ -0.95
PHGDH-220ENST00000641570 DAZ3Q9NR90 486 aaKnown RBP9.09□□□□□ -0.95
PHGDH-220ENST00000641570 HUWE1Q7Z6Z7 4374 aaKnown RBP9.08□□□□□ -0.96
PHGDH-220ENST00000641570 DNAH9Q9NYC9 4486 aa9.08□□□□□ -0.96
PHGDH-220ENST00000641570 A0A096LPF7 62 aa9.08□□□□□ -0.96
PHGDH-220ENST00000641570 PHOX2AO14813 284 aa9.08□□□□□ -0.96
PHGDH-220ENST00000641570 TCAPO15273 167 aa9.08□□□□□ -0.96
PHGDH-220ENST00000641570 P0DMU3 169 aa9.08□□□□□ -0.96
PHGDH-220ENST00000641570 FAM231AP0DMU4 169 aa9.08□□□□□ -0.96
PHGDH-220ENST00000641570 FAM231CP0DMU5 169 aa9.08□□□□□ -0.96
PHGDH-220ENST00000641570 PMCHP20382 165 aa9.08□□□□□ -0.96
PHGDH-220ENST00000641570 NEXN-AS1Q8NBZ9 246 aa9.08□□□□□ -0.96
PHGDH-220ENST00000641570 KIR2DL4Q99706 377 aa9.08□□□□□ -0.96
PHGDH-220ENST00000641570 MUC4Q99102 2169 aa9.07□□□□□ -0.96
PHGDH-220ENST00000641570 LOC100131303A0A0U1RQF7 123 aa9.07□□□□□ -0.96
PHGDH-220ENST00000641570 TNFRSF6BO95407 300 aa9.07□□□□□ -0.96
PHGDH-220ENST00000641570 LINC00315P59091 139 aa9.07□□□□□ -0.96
PHGDH-220ENST00000641570 COTL1Q14019 142 aa9.07□□□□□ -0.96
PHGDH-220ENST00000641570 KIAA1644Q3SXP7 199 aa9.07□□□□□ -0.96
PHGDH-220ENST00000641570 Q6ZSN1 163 aa9.07□□□□□ -0.96
PHGDH-220ENST00000641570 RPL39LQ96EH5 51 aaKnown RBP9.07□□□□□ -0.96
PHGDH-220ENST00000641570 VSIG2Q96IQ7 327 aa9.07□□□□□ -0.96
PHGDH-220ENST00000641570 C20orf78Q9BR46 151 aa9.07□□□□□ -0.96
PHGDH-220ENST00000641570 SDHAF1A6NFY7 115 aa9.06□□□□□ -0.96
PHGDH-220ENST00000641570 UBE2L6O14933 153 aa9.06□□□□□ -0.96
PHGDH-220ENST00000641570 SUMO2P61956 95 aaKnown RBP9.06□□□□□ -0.96
PHGDH-220ENST00000641570 TRAV8-6A0A0B4J262 113 aa9.05□□□□□ -0.96
PHGDH-220ENST00000641570 LOC389332A0A1B0GUA5 103 aa9.05□□□□□ -0.96
PHGDH-220ENST00000641570 COLCA2A8K830 154 aa9.05□□□□□ -0.96
PHGDH-220ENST00000641570 I3L3M4 83 aa9.05□□□□□ -0.96
PHGDH-220ENST00000641570 VCYO14598 125 aa9.05□□□□□ -0.96
PHGDH-220ENST00000641570 PRSS3P2Q8NHM4 247 aa9.05□□□□□ -0.96
PHGDH-220ENST00000641570 YPEL4Q96NS1 127 aa9.05□□□□□ -0.96
PHGDH-220ENST00000641570 GTSF1LQ9H1H1 148 aa9.05□□□□□ -0.96
PHGDH-220ENST00000641570 TRBV25-1A0A075B6N4 114 aa9.04□□□□□ -0.96
PHGDH-220ENST00000641570 IGHV3-38A0A0C4DH36 116 aa9.04□□□□□ -0.96
PHGDH-220ENST00000641570 TRBV6-5A0A0K0K1A5 114 aa9.04□□□□□ -0.96
PHGDH-220ENST00000641570 TRGC2P03986 189 aa9.04□□□□□ -0.96
PHGDH-220ENST00000641570 RAB5BP61020 215 aa9.04□□□□□ -0.96
PHGDH-220ENST00000641570 UBE2D3P61077 147 aa9.04□□□□□ -0.96
PHGDH-220ENST00000641570 PKIAP61925 76 aa9.04□□□□□ -0.96
PHGDH-220ENST00000641570 UBE2D2P62837 147 aa9.04□□□□□ -0.96
PHGDH-220ENST00000641570 SMAGPQ0VAQ4 97 aa9.04□□□□□ -0.96
PHGDH-220ENST00000641570 FA2HQ7L5A8 372 aa9.04□□□□□ -0.96
PHGDH-220ENST00000641570 TENM3Q9P273 2699 aa9.04□□□□□ -0.96
PHGDH-220ENST00000641570 C1orf196B1AJZ1 125 aa9.03□□□□□ -0.96
PHGDH-220ENST00000641570 NPYP01303 97 aa9.03□□□□□ -0.96
PHGDH-220ENST00000641570 AMTP48728 403 aa9.03□□□□□ -0.96
PHGDH-220ENST00000641570 BAGE3Q86Y29 109 aa9.03□□□□□ -0.96
PHGDH-220ENST00000641570 TMEM18Q96B42 140 aa9.03□□□□□ -0.96
PHGDH-220ENST00000641570 SMIM2Q9BVW6 85 aa9.03□□□□□ -0.96
PHGDH-220ENST00000641570 NXT2Q9NPJ8 142 aaKnown RBP9.03□□□□□ -0.96
PHGDH-220ENST00000641570 IGHV1-24A0A0C4DH33 117 aa9.02□□□□□ -0.97
PHGDH-220ENST00000641570 G0S2P27469 103 aa9.02□□□□□ -0.97
PHGDH-220ENST00000641570 CASC10Q5T4H9 136 aa9.02□□□□□ -0.97
PHGDH-220ENST00000641570 NRACQ8N912 160 aa9.02□□□□□ -0.97
PHGDH-220ENST00000641570 ALKBH7Q9BT30 221 aaPredicted RBP9.02□□□□□ -0.97
PHGDH-220ENST00000641570 TMEM70Q9BUB7 260 aa9.02□□□□□ -0.97
PHGDH-220ENST00000641570 CHCHD5Q9BSY4 110 aa9.01□□□□□ -0.97
PHGDH-220ENST00000641570 STAB2Q8WWQ8 2551 aa9□□□□□ -0.97
PHGDH-220ENST00000641570 TMEM262E9PQX1 116 aa9□□□□□ -0.97
PHGDH-220ENST00000641570 RPL32P62910 135 aaKnown RBP9□□□□□ -0.97
PHGDH-220ENST00000641570 ORMDL2Q53FV1 153 aa9□□□□□ -0.97
PHGDH-220ENST00000641570 LELP1Q5T871 98 aa9□□□□□ -0.97
PHGDH-220ENST00000641570 AMMECR1LQ6DCA0 310 aa9□□□□□ -0.97
PHGDH-220ENST00000641570 Q8N8P6 123 aa9□□□□□ -0.97
PHGDH-220ENST00000641570 TMEM243Q9BU79 118 aa9□□□□□ -0.97
PHGDH-220ENST00000641570 APLNQ9ULZ1 77 aa9□□□□□ -0.97
PHGDH-220ENST00000641570 TGP01266 2768 aa9□□□□□ -0.97
PHGDH-220ENST00000641570 A0A087WX48 190 aa8.99□□□□□ -0.97
PHGDH-220ENST00000641570 TRBV27A0A0K0K1C4 114 aa8.99□□□□□ -0.97
PHGDH-220ENST00000641570 K7EMI3 77 aa8.99□□□□□ -0.97
PHGDH-220ENST00000641570 GAS8-AS1O95177 125 aa8.99□□□□□ -0.97
PHGDH-220ENST00000641570 TIRAPP58753 221 aa8.99□□□□□ -0.97
PHGDH-220ENST00000641570 RNASEKQ6P5S7 137 aaKnown RBP8.99□□□□□ -0.97
PHGDH-220ENST00000641570 LYPD5Q6UWN5 251 aa8.99□□□□□ -0.97
PHGDH-220ENST00000641570 COL7A1Q02388 2944 aa8.98□□□□□ -0.97
PHGDH-220ENST00000641570 TRBV6-8A0A0A6YYG3 113 aa8.98□□□□□ -0.97
PHGDH-220ENST00000641570 LINC00694P0DN24 101 aa8.98□□□□□ -0.97
PHGDH-220ENST00000641570 LAGE3Q14657 143 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms