RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 SNAI2O43623 268 aa10.84□□□□□ -0.67
PHGDH-213ENST00000641272 C14orf177Q52M58 125 aa10.84□□□□□ -0.67
PHGDH-213ENST00000641272 CXCL1P09341 107 aa10.83□□□□□ -0.68
PHGDH-213ENST00000641272 GAGE6Q13070 117 aa10.83□□□□□ -0.68
PHGDH-213ENST00000641272 NTM-AS1Q6ZSK4 140 aa10.83□□□□□ -0.68
PHGDH-213ENST00000641272 MGPP08493 103 aa10.82□□□□□ -0.68
PHGDH-213ENST00000641272 RGS21Q2M5E4 152 aa10.82□□□□□ -0.68
PHGDH-213ENST00000641272 KCNRGQ8N5I3 272 aa10.82□□□□□ -0.68
PHGDH-213ENST00000641272 AP1S3Q96PC3 154 aa10.82□□□□□ -0.68
PHGDH-213ENST00000641272 DERL1Q9BUN8 251 aa10.82□□□□□ -0.68
PHGDH-213ENST00000641272 MLST8Q9BVC4 326 aa10.82□□□□□ -0.68
PHGDH-213ENST00000641272 TPPP3Q9BW30 176 aa10.82□□□□□ -0.68
PHGDH-213ENST00000641272 PRSS1P07477 247 aa10.81□□□□□ -0.68
PHGDH-213ENST00000641272 OR5AL1P0C617 328 aa10.81□□□□□ -0.68
PHGDH-213ENST00000641272 GZMBP10144 247 aa10.81□□□□□ -0.68
PHGDH-213ENST00000641272 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-213ENST00000641272 MBD3L1Q8WWY6 194 aa10.81□□□□□ -0.68
PHGDH-213ENST00000641272 HMCN2Q8NDA2 5059 aa10.81□□□□□ -0.68
PHGDH-213ENST00000641272 S100A9P06702 114 aaKnown RBP10.8□□□□□ -0.68
PHGDH-213ENST00000641272 SMIM17P0DL12 118 aa10.8□□□□□ -0.68
PHGDH-213ENST00000641272 RPL37AP61513 92 aaKnown RBP10.8□□□□□ -0.68
PHGDH-213ENST00000641272 RBX1P62877 108 aa10.8□□□□□ -0.68
PHGDH-213ENST00000641272 ZNF345Q14585 488 aa10.8□□□□□ -0.68
PHGDH-213ENST00000641272 IGLV10-54A0A075B6I4 117 aa10.79□□□□□ -0.68
PHGDH-213ENST00000641272 BCL2L11O43521 198 aa10.79□□□□□ -0.68
PHGDH-213ENST00000641272 RPL35P42766 123 aaKnown RBP10.79□□□□□ -0.68
PHGDH-213ENST00000641272 HNRNPA3P51991 378 aaKnown RBP10.79□□□□□ -0.68
PHGDH-213ENST00000641272 MIAQ16674 131 aa10.79□□□□□ -0.68
PHGDH-213ENST00000641272 LINC00269Q8N2A0 174 aa10.79□□□□□ -0.68
PHGDH-213ENST00000641272 SSBP4Q9BWG4 385 aaPredicted RBP10.79□□□□□ -0.68
PHGDH-213ENST00000641272 KIF25-AS1Q9Y6Z4 181 aa10.79□□□□□ -0.68
PHGDH-213ENST00000641272 TRBV25-1A0A075B6N4 114 aa10.78□□□□□ -0.68
PHGDH-213ENST00000641272 UMAD1C9J7I0 102 aa10.78□□□□□ -0.68
PHGDH-213ENST00000641272 H2AFB1P0C5Y9 115 aa10.78□□□□□ -0.68
PHGDH-213ENST00000641272 PKIAP61925 76 aa10.78□□□□□ -0.68
PHGDH-213ENST00000641272 GNG13Q9P2W3 67 aa10.78□□□□□ -0.68
PHGDH-213ENST00000641272 VAX2Q9UIW0 290 aa10.78□□□□□ -0.68
PHGDH-213ENST00000641272 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.78□□□□□ -0.68
PHGDH-213ENST00000641272 KANTRA0A1W2PQU2 76 aa10.77□□□□□ -0.69
PHGDH-213ENST00000641272 PANO1I0J062 215 aa10.77□□□□□ -0.69
PHGDH-213ENST00000641272 CENPWQ5EE01 88 aa10.77□□□□□ -0.69
PHGDH-213ENST00000641272 TMUB2Q71RG4 321 aa10.77□□□□□ -0.69
PHGDH-213ENST00000641272 CCL20P78556 96 aa10.76□□□□□ -0.69
PHGDH-213ENST00000641272 TMEM97Q5BJF2 176 aa10.76□□□□□ -0.69
PHGDH-213ENST00000641272 SUMO4Q6EEV6 95 aa10.76□□□□□ -0.69
PHGDH-213ENST00000641272 KRTAP26-1Q6PEX3 210 aa10.76□□□□□ -0.69
PHGDH-213ENST00000641272 PRR34Q9NV39 138 aa10.76□□□□□ -0.69
PHGDH-213ENST00000641272 IGHV1-24A0A0C4DH33 117 aa10.75□□□□□ -0.69
PHGDH-213ENST00000641272 FER1L6-AS1Q8NA97 138 aa10.75□□□□□ -0.69
PHGDH-213ENST00000641272 OR2D3Q8NGH3 330 aa10.75□□□□□ -0.69
PHGDH-213ENST00000641272 OXTP01178 125 aa10.74□□□□□ -0.69
PHGDH-213ENST00000641272 IGLC6P0CF74 106 aa10.74□□□□□ -0.69
PHGDH-213ENST00000641272 NKX2-5P52952 324 aaPredicted RBP10.74□□□□□ -0.69
PHGDH-213ENST00000641272 REG3AQ06141 175 aa10.74□□□□□ -0.69
PHGDH-213ENST00000641272 IQCJQ1A5X6 159 aa10.74□□□□□ -0.69
PHGDH-213ENST00000641272 C9orf163Q8N9P6 203 aa10.74□□□□□ -0.69
PHGDH-213ENST00000641272 C11orf52Q96A22 123 aa10.74□□□□□ -0.69
PHGDH-213ENST00000641272 M0QY20 66 aa10.73□□□□□ -0.69
PHGDH-213ENST00000641272 C20orf203Q8NBC4 194 aa10.73□□□□□ -0.69
PHGDH-213ENST00000641272 DAZAP1Q96EP5 407 aaKnown RBP10.73□□□□□ -0.69
PHGDH-213ENST00000641272 GFRA4Q9GZZ7 299 aa10.73□□□□□ -0.69
PHGDH-213ENST00000641272 MANBALQ9NQG1 85 aa10.73□□□□□ -0.69
PHGDH-213ENST00000641272 IGLV4-60A0A075B6I1 120 aa10.72□□□□□ -0.69
PHGDH-213ENST00000641272 A0A0D9SG52 128 aa10.72□□□□□ -0.69
PHGDH-213ENST00000641272 hDV102S1A0JD36 115 aa10.72□□□□□ -0.69
PHGDH-213ENST00000641272 RAB19A4D1S5 217 aa10.72□□□□□ -0.69
PHGDH-213ENST00000641272 HMSDA8MTL9 139 aa10.72□□□□□ -0.69
PHGDH-213ENST00000641272 RAB5CP51148 216 aa10.72□□□□□ -0.69
PHGDH-213ENST00000641272 SERTAD4-AS1Q5TG53 156 aa10.72□□□□□ -0.69
PHGDH-213ENST00000641272 H7C1H1 209 aa10.71□□□□□ -0.69
PHGDH-213ENST00000641272 DGAT2L7PQ6IED9 249 aa10.71□□□□□ -0.69
PHGDH-213ENST00000641272 TMEM243Q9BU79 118 aa10.71□□□□□ -0.69
PHGDH-213ENST00000641272 C19orf71A6NCJ1 209 aa10.7□□□□□ -0.7
PHGDH-213ENST00000641272 CHTF8P0CG12 524 aa10.7□□□□□ -0.7
PHGDH-213ENST00000641272 GNG4P50150 75 aa10.7□□□□□ -0.7
PHGDH-213ENST00000641272 RPS20P60866 119 aaKnown RBP10.7□□□□□ -0.7
PHGDH-213ENST00000641272 PLA2G2DQ9UNK4 145 aa10.7□□□□□ -0.7
PHGDH-213ENST00000641272 CACNG7P62955 275 aa10.69□□□□□ -0.7
PHGDH-213ENST00000641272 EIF5AP63241 154 aaKnown RBP10.69□□□□□ -0.7
PHGDH-213ENST00000641272 RASL11AQ6T310 242 aa10.69□□□□□ -0.7
PHGDH-213ENST00000641272 SDIM1Q6ZPB5 146 aa10.69□□□□□ -0.7
PHGDH-213ENST00000641272 TRBV20OR9-2A0A075B6H5 130 aa10.68□□□□□ -0.7
PHGDH-213ENST00000641272 IGKV3OR2-268A0A0C4DH90 116 aa10.68□□□□□ -0.7
PHGDH-213ENST00000641272 P01737 135 aa10.68□□□□□ -0.7
PHGDH-213ENST00000641272 LYZL1Q6UWQ5 148 aa10.68□□□□□ -0.7
PHGDH-213ENST00000641272 TRGC1P0CF51 173 aa10.67□□□□□ -0.7
PHGDH-213ENST00000641272 AMTP48728 403 aa10.67□□□□□ -0.7
PHGDH-213ENST00000641272 DPH3P1Q9H4G8 78 aa10.67□□□□□ -0.7
PHGDH-213ENST00000641272 UBR4Q5T4S7 5183 aa10.67□□□□□ -0.7
PHGDH-213ENST00000641272 UBE2L6O14933 153 aa10.66□□□□□ -0.7
PHGDH-213ENST00000641272 IFNA1P01562 189 aa10.66□□□□□ -0.7
PHGDH-213ENST00000641272 SULT1A2P50226 295 aa10.66□□□□□ -0.7
PHGDH-213ENST00000641272 CNBPP62633 177 aaKnown RBP10.66□□□□□ -0.7
PHGDH-213ENST00000641272 MEF2BQ02080 365 aaPredicted RBP10.66□□□□□ -0.7
PHGDH-213ENST00000641272 CLRN3Q8NCR9 226 aa10.66□□□□□ -0.7
PHGDH-213ENST00000641272 IGHV3-64A0A075B6Q5 118 aa10.65□□□□□ -0.7
PHGDH-213ENST00000641272 TRAV26-2A0A0B4J265 109 aa10.65□□□□□ -0.7
PHGDH-213ENST00000641272 XKRY2A2RUG3 117 aa10.65□□□□□ -0.7
PHGDH-213ENST00000641272 SLPIP03973 132 aa10.65□□□□□ -0.7
PHGDH-213ENST00000641272 COTL1Q14019 142 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms