RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 F11RQ9Y624 299 aaKnown RBP4.79□□□□□ -1.64
SCARB2-224ENST00000640880 TANC2Q9HCD6 1990 aa4.78□□□□□ -1.64
SCARB2-224ENST00000640880 ARFGEF3Q5TH69 2177 aa4.78□□□□□ -1.64
SCARB2-224ENST00000640880 TRBV19A0A075B6N1 114 aa4.78□□□□□ -1.64
SCARB2-224ENST00000640880 IGHV3-64DA0A0J9YX35 117 aa4.78□□□□□ -1.64
SCARB2-224ENST00000640880 FAM168BA1KXE4 195 aa4.78□□□□□ -1.64
SCARB2-224ENST00000640880 M0QXV9 152 aa4.78□□□□□ -1.64
SCARB2-224ENST00000640880 IGKV1-16P04430 117 aa4.78□□□□□ -1.64
SCARB2-224ENST00000640880 PLNP26678 52 aa4.78□□□□□ -1.64
SCARB2-224ENST00000640880 CKS2P33552 79 aa4.78□□□□□ -1.64
SCARB2-224ENST00000640880 EFNA4P52798 201 aa4.78□□□□□ -1.64
SCARB2-224ENST00000640880 LOXL1Q08397 574 aaPredicted RBP4.78□□□□□ -1.64
SCARB2-224ENST00000640880 PLGLAQ15195 96 aa4.78□□□□□ -1.64
SCARB2-224ENST00000640880 VMA21Q3ZAQ7 101 aa4.78□□□□□ -1.64
SCARB2-224ENST00000640880 CFAP126Q5VTH2 177 aa4.78□□□□□ -1.64
SCARB2-224ENST00000640880 GOLT1AQ6ZVE7 132 aa4.78□□□□□ -1.64
SCARB2-224ENST00000640880 BAALCQ8WXS3 180 aa4.78□□□□□ -1.64
SCARB2-224ENST00000640880 C16orf74Q96GX8 76 aa4.78□□□□□ -1.64
SCARB2-224ENST00000640880 C18orf15Q96N68 181 aa4.78□□□□□ -1.64
SCARB2-224ENST00000640880 RASL11BQ9BPW5 248 aa4.78□□□□□ -1.64
SCARB2-224ENST00000640880 TMEM133Q9H2Q1 129 aa4.78□□□□□ -1.64
SCARB2-224ENST00000640880 PLCE1Q9P212 2302 aa4.78□□□□□ -1.64
SCARB2-224ENST00000640880 ANKRD17O75179 2603 aaKnown RBP4.77□□□□□ -1.65
SCARB2-224ENST00000640880 IGLV3-9A0A075B6K5 115 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 TRBV7-3A0A075B6L6 115 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 IGKV2D-26A0A0A0MRZ7 120 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 TRAV12-1A0A0B4J245 112 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 LOC389332A0A1B0GUA5 103 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 NCBP2LA6PVI3 153 aaKnown RBP4.77□□□□□ -1.65
SCARB2-224ENST00000640880 K7ERJ3 54 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 NPYP01303 97 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 SLC25A16P16260 332 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 TNFAIP6P98066 277 aaPredicted RBP4.77□□□□□ -1.65
SCARB2-224ENST00000640880 PDE6HQ13956 83 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 LYZL1Q6UWQ5 148 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 Q6ZUT4 128 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 SH2D6Q7Z4S9 175 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 SBSPONQ8IVN8 264 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 AMN1Q8IY45 258 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 LINC00311Q8N616 119 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 Q8N8P6 123 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 LEAP2Q969E1 77 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 RPEQ96AT9 228 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 SHANK2-AS3Q9BTD1 123 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 CNFNQ9BYD5 112 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 MRPL36Q9P0J6 103 aaKnown RBP4.77□□□□□ -1.65
SCARB2-224ENST00000640880 DYSFO75923 2080 aa4.77□□□□□ -1.65
SCARB2-224ENST00000640880 TRBV20-1A0A075B6N2 111 aa4.76□□□□□ -1.65
SCARB2-224ENST00000640880 A0A087WX48 190 aa4.76□□□□□ -1.65
SCARB2-224ENST00000640880 KRTAP4-16G5E9R7 235 aaPredicted RBP4.76□□□□□ -1.65
SCARB2-224ENST00000640880 IGLV2-23P01705 113 aa4.76□□□□□ -1.65
SCARB2-224ENST00000640880 IL4P05112 153 aa4.76□□□□□ -1.65
SCARB2-224ENST00000640880 IGLC6P0CF74 106 aa4.76□□□□□ -1.65
SCARB2-224ENST00000640880 ASIPP42127 132 aa4.76□□□□□ -1.65
SCARB2-224ENST00000640880 CRIP1P50238 77 aa4.76□□□□□ -1.65
SCARB2-224ENST00000640880 CCL8P80075 99 aa4.76□□□□□ -1.65
SCARB2-224ENST00000640880 ATP5G2Q06055 141 aa4.76□□□□□ -1.65
SCARB2-224ENST00000640880 C9orf129Q5T035 196 aaKnown RBP4.76□□□□□ -1.65
SCARB2-224ENST00000640880 ZFAND6Q6FIF0 208 aa4.76□□□□□ -1.65
SCARB2-224ENST00000640880 TEN1Q86WV5 123 aa4.76□□□□□ -1.65
SCARB2-224ENST00000640880 COL12A1Q99715 3063 aa4.76□□□□□ -1.65
SCARB2-224ENST00000640880 ANAPC13Q9BS18 74 aa4.76□□□□□ -1.65
SCARB2-224ENST00000640880 MRPL20Q9BYC9 149 aaKnown RBP4.76□□□□□ -1.65
SCARB2-224ENST00000640880 RTTNQ86VV8 2226 aa4.75□□□□□ -1.65
SCARB2-224ENST00000640880 HECTD1Q9ULT8 2610 aa4.75□□□□□ -1.65
SCARB2-224ENST00000640880 IGHV3OR15-7A0A075B7D8 119 aa4.75□□□□□ -1.65
SCARB2-224ENST00000640880 TRAV8-1A0A0A6YYK1 113 aa4.75□□□□□ -1.65
SCARB2-224ENST00000640880 TMEM213A2RRL7 107 aa4.75□□□□□ -1.65
SCARB2-224ENST00000640880 H3BRN7 92 aa4.75□□□□□ -1.65
SCARB2-224ENST00000640880 IGHV1-46P01743 117 aa4.75□□□□□ -1.65
SCARB2-224ENST00000640880 TEX36Q5VZQ5 186 aa4.75□□□□□ -1.65
SCARB2-224ENST00000640880 Q6Q795 121 aa4.75□□□□□ -1.65
SCARB2-224ENST00000640880 MRPL55Q7Z7F7 128 aaKnown RBP4.75□□□□□ -1.65
SCARB2-224ENST00000640880 EXOC3-AS1Q8N2X6 119 aa4.75□□□□□ -1.65
SCARB2-224ENST00000640880 OR11H6Q8NGC7 330 aa4.75□□□□□ -1.65
SCARB2-224ENST00000640880 MYOZ3Q8TDC0 251 aa4.75□□□□□ -1.65
SCARB2-224ENST00000640880 CCL17Q92583 94 aa4.75□□□□□ -1.65
SCARB2-224ENST00000640880 TMEM101Q96IK0 257 aa4.75□□□□□ -1.65
SCARB2-224ENST00000640880 GAFA1Q96PS6 74 aa4.75□□□□□ -1.65
SCARB2-224ENST00000640880 C20orf78Q9BR46 151 aa4.75□□□□□ -1.65
SCARB2-224ENST00000640880 ROS1P08922 2347 aa4.75□□□□□ -1.65
SCARB2-224ENST00000640880 AKAP6Q13023 2319 aa4.74□□□□□ -1.65
SCARB2-224ENST00000640880 MYMXA0A1B0GTQ4 84 aa4.74□□□□□ -1.65
SCARB2-224ENST00000640880 E7EUB6 86 aa4.74□□□□□ -1.65
SCARB2-224ENST00000640880 K7EMI3 77 aa4.74□□□□□ -1.65
SCARB2-224ENST00000640880 SH2D1AO60880 128 aa4.74□□□□□ -1.65
SCARB2-224ENST00000640880 MT-ATP8P03928 68 aa4.74□□□□□ -1.65
SCARB2-224ENST00000640880 ZNF688P0C7X2 276 aa4.74□□□□□ -1.65
SCARB2-224ENST00000640880 RPL27AP46776 148 aaKnown RBP4.74□□□□□ -1.65
SCARB2-224ENST00000640880 INSL3P51460 131 aa4.74□□□□□ -1.65
SCARB2-224ENST00000640880 UBE2D3P61077 147 aa4.74□□□□□ -1.65
SCARB2-224ENST00000640880 UBE2D2P62837 147 aa4.74□□□□□ -1.65
SCARB2-224ENST00000640880 MORN3Q6PF18 240 aaPredicted RBP4.74□□□□□ -1.65
SCARB2-224ENST00000640880 TEX29Q8N6K0 151 aa4.74□□□□□ -1.65
SCARB2-224ENST00000640880 C20orf203Q8NBC4 194 aa4.74□□□□□ -1.65
SCARB2-224ENST00000640880 WFDC11Q8NEX6 87 aa4.74□□□□□ -1.65
SCARB2-224ENST00000640880 RNF185Q96GF1 192 aa4.74□□□□□ -1.65
SCARB2-224ENST00000640880 LINC01600Q96MT4 127 aa4.74□□□□□ -1.65
SCARB2-224ENST00000640880 USF3Q68DE3 2245 aa4.74□□□□□ -1.65
SCARB2-224ENST00000640880 PRRC2AP48634 2157 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms