RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 LYPD2Q6UXB3 125 aa15.13■□□□□ 0.01
CACNA1A-257ENST00000638009 ABCA12Q86UK0 2595 aa15.13■□□□□ 0.01
CACNA1A-257ENST00000638009 A0A0J9YY99 117 aa15.12■□□□□ 0.01
CACNA1A-257ENST00000638009 WIPF3A6NGB9 483 aa15.12■□□□□ 0.01
CACNA1A-257ENST00000638009 SERP2Q8N6R1 65 aa15.12■□□□□ 0.01
CACNA1A-257ENST00000638009 RNF223E7ERA6 249 aa15.12■□□□□ 0.01
CACNA1A-257ENST00000638009 FAM120AOSQ5T036 256 aa15.12■□□□□ 0.01
CACNA1A-257ENST00000638009 A0A0G2JRQ6 117 aa15.11■□□□□ 0.01
CACNA1A-257ENST00000638009 PIK3CD-AS1Q5SR53 167 aa15.11■□□□□ 0.01
CACNA1A-257ENST00000638009 NDUFA11Q86Y39 141 aa15.11■□□□□ 0.01
CACNA1A-257ENST00000638009 H7C423 109 aa15.11■□□□□ 0.01
CACNA1A-257ENST00000638009 G3V318 75 aa15.11■□□□□ 0.01
CACNA1A-257ENST00000638009 PMAIP1Q13794 54 aa15.11■□□□□ 0.01
CACNA1A-257ENST00000638009 CLEC2BQ92478 149 aa15.11■□□□□ 0.01
CACNA1A-257ENST00000638009 NCR3O14931 201 aa15.11■□□□□ 0.01
CACNA1A-257ENST00000638009 RPL39LQ96EH5 51 aaKnown RBP15.11■□□□□ 0.01
CACNA1A-257ENST00000638009 E7EQL1 145 aa15.1■□□□□ 0.01
CACNA1A-257ENST00000638009 TIMM17BO60830 172 aa15.1■□□□□ 0.01
CACNA1A-257ENST00000638009 COL8A2P25067 703 aa15.1■□□□□ 0.01
CACNA1A-257ENST00000638009 WDR86Q86TI4 376 aa15.1■□□□□ 0.01
CACNA1A-257ENST00000638009 PTH2Q96A98 100 aa15.1■□□□□ 0.01
CACNA1A-257ENST00000638009 WT1-ASQ06250 92 aa15.1■□□□□ 0.01
CACNA1A-257ENST00000638009 FXYD2P54710 66 aa15.1■□□□□ 0.01
CACNA1A-257ENST00000638009 MIR7-3HGQ8N6C7 128 aa15.09■□□□□ 0.01
CACNA1A-257ENST00000638009 GNRH2O43555 120 aa15.09■□□□□ 0.01
CACNA1A-257ENST00000638009 MLANAQ16655 118 aa15.09■□□□□ 0.01
CACNA1A-257ENST00000638009 TRBV10-1A0A0K0K1A3 114 aa15.09■□□□□ 0.01
CACNA1A-257ENST00000638009 RUSC1-AS1Q66K80 236 aa15.09■□□□□ 0.01
CACNA1A-257ENST00000638009 SDIM1Q6ZPB5 146 aa15.08■□□□□ 0
CACNA1A-257ENST00000638009 Q96MF0 132 aa15.08■□□□□ 0
CACNA1A-257ENST00000638009 KAAG1Q9UBP8 84 aa15.08■□□□□ 0
CACNA1A-257ENST00000638009 IGLC6P0CF74 106 aa15.08■□□□□ 0
CACNA1A-257ENST00000638009 SPTBN4Q9H254 2564 aa15.08■□□□□ 0
CACNA1A-257ENST00000638009 ZNF491Q8N8L2 437 aa15.08■□□□□ 0
CACNA1A-257ENST00000638009 ZNF706Q9Y5V0 76 aaPredicted RBP15.08■□□□□ 0
CACNA1A-257ENST00000638009 WFDC10BQ8IUB3 73 aa15.07■□□□□ 0
CACNA1A-257ENST00000638009 TMEM263Q8WUH6 116 aaKnown RBP15.07■□□□□ 0
CACNA1A-257ENST00000638009 PRYO14603 147 aa15.07■□□□□ 0
CACNA1A-257ENST00000638009 ANKRD17O75179 2603 aaKnown RBP15.07■□□□□ 0
CACNA1A-257ENST00000638009 C9orf85Q96MD7 179 aa15.07■□□□□ 0
CACNA1A-257ENST00000638009 MDFICQ9P1T7 246 aa15.07■□□□□ 0
CACNA1A-257ENST00000638009 K7EN84 100 aa15.06■□□□□ 0
CACNA1A-257ENST00000638009 CTRLP40313 264 aa15.06■□□□□ 0
CACNA1A-257ENST00000638009 A0A087WV48 116 aa15.06■□□□□ 0
CACNA1A-257ENST00000638009 MLST8Q9BVC4 326 aa15.06■□□□□ 0
CACNA1A-257ENST00000638009 UNQ6494/PRO21346Q6UXR6 183 aa15.06■□□□□ 0
CACNA1A-257ENST00000638009 LTBP1Q14766 1721 aa15.06■□□□□ 0
CACNA1A-257ENST00000638009 TEX49A0A1B0GTD5 131 aa15.05■□□□□ 0
CACNA1A-257ENST00000638009 ASPHD1Q5U4P2 390 aa15.05■□□□□ 0
CACNA1A-257ENST00000638009 LOXP28300 417 aaPredicted RBP15.05■□□□□ -0
CACNA1A-257ENST00000638009 FOXL2NBQ6ZUU3 175 aa15.05■□□□□ -0
CACNA1A-257ENST00000638009 LYPD6BQ8NI32 183 aa15.05■□□□□ -0
CACNA1A-257ENST00000638009 F8W735 103 aaPredicted RBP15.05■□□□□ -0
CACNA1A-257ENST00000638009 CRIPAKQ8N1N5 446 aa15.04■□□□□ -0
CACNA1A-257ENST00000638009 C17orf58Q2M2W7 97 aa15.04■□□□□ -0
CACNA1A-257ENST00000638009 ZNF524Q96C55 264 aa15.04■□□□□ -0
CACNA1A-257ENST00000638009 GP9P14770 177 aa15.04■□□□□ -0
CACNA1A-257ENST00000638009 UBE2D2P62837 147 aa15.04■□□□□ -0
CACNA1A-257ENST00000638009 ODF1Q14990 250 aa15.04■□□□□ -0
CACNA1A-257ENST00000638009 GPHB5Q86YW7 130 aa15.03■□□□□ -0
CACNA1A-257ENST00000638009 SPRY4Q9C004 299 aa15.03■□□□□ -0
CACNA1A-257ENST00000638009 PINLYPA6NC86 204 aa15.03■□□□□ -0
CACNA1A-257ENST00000638009 DAND5Q8N907 189 aa15.03■□□□□ -0
CACNA1A-257ENST00000638009 TCL1BO95988 128 aa15.03■□□□□ -0
CACNA1A-257ENST00000638009 FAM222AQ5U5X8 452 aa15.02■□□□□ -0
CACNA1A-257ENST00000638009 ENHOQ6UWT2 76 aa15.02■□□□□ -0
CACNA1A-257ENST00000638009 Q6ZS92 163 aa15.02□□□□□ -0.01
CACNA1A-257ENST00000638009 IGHV4-59P01825 116 aa15.02□□□□□ -0.01
CACNA1A-257ENST00000638009 ZNF726P1Q15940 193 aa15.01□□□□□ -0.01
CACNA1A-257ENST00000638009 CENPVL3A0A0U1RRI6 287 aa15.01□□□□□ -0.01
CACNA1A-257ENST00000638009 LINC00205P59089 165 aa15.01□□□□□ -0.01
CACNA1A-257ENST00000638009 AGPAT4-IT1Q9H0P7 198 aa15.01□□□□□ -0.01
CACNA1A-257ENST00000638009 PIEZO2Q9H5I5 2752 aa15.01□□□□□ -0.01
CACNA1A-257ENST00000638009 SMIM26A0A096LP01 95 aa15.01□□□□□ -0.01
CACNA1A-257ENST00000638009 RNASE8Q8TDE3 154 aaKnown RBP15□□□□□ -0.01
CACNA1A-257ENST00000638009 LYPD6Q86Y78 171 aa15□□□□□ -0.01
CACNA1A-257ENST00000638009 A0A0J9YXV3 536 aa15□□□□□ -0.01
CACNA1A-257ENST00000638009 IGHV3-30P01768 117 aa15□□□□□ -0.01
CACNA1A-257ENST00000638009 IGHV3-33P01772 117 aa15□□□□□ -0.01
CACNA1A-257ENST00000638009 IGHV3-30-3P0DP02 117 aa15□□□□□ -0.01
CACNA1A-257ENST00000638009 IGHV3-30-5P0DP03 117 aa15□□□□□ -0.01
CACNA1A-257ENST00000638009 INSL3P51460 131 aa15□□□□□ -0.01
CACNA1A-257ENST00000638009 P0DMU3 169 aa14.99□□□□□ -0.01
CACNA1A-257ENST00000638009 FAM231AP0DMU4 169 aa14.99□□□□□ -0.01
CACNA1A-257ENST00000638009 FAM231CP0DMU5 169 aa14.99□□□□□ -0.01
CACNA1A-257ENST00000638009 C7orf33Q8WU49 177 aa14.99□□□□□ -0.01
CACNA1A-257ENST00000638009 ZFHX2Q9C0A1 2572 aaPredicted RBP14.99□□□□□ -0.01
CACNA1A-257ENST00000638009 LRRC75A-AS1Q8N1F1 130 aa14.99□□□□□ -0.01
CACNA1A-257ENST00000638009 K7ENP7 123 aa14.99□□□□□ -0.01
CACNA1A-257ENST00000638009 A0A0J9YXY3 114 aa14.98□□□□□ -0.01
CACNA1A-257ENST00000638009 IGKV1-6A0A0C4DH72 117 aa14.98□□□□□ -0.01
CACNA1A-257ENST00000638009 FLVCR1-AS1Q8TAF5 88 aa14.98□□□□□ -0.01
CACNA1A-257ENST00000638009 C15orf65H3BRN8 121 aa14.97□□□□□ -0.01
CACNA1A-257ENST00000638009 FHL1Q13642 323 aa14.96□□□□□ -0.01
CACNA1A-257ENST00000638009 DHRS4-AS1Q9P1J3 65 aa14.96□□□□□ -0.01
CACNA1A-257ENST00000638009 KLK12Q9UKR0 248 aa14.96□□□□□ -0.01
CACNA1A-257ENST00000638009 NPBQ8NG41 125 aa14.96□□□□□ -0.02
CACNA1A-257ENST00000638009 RNF138Q8WVD3 245 aa14.95□□□□□ -0.02
CACNA1A-257ENST00000638009 IBA57-AS1B1ANH7 110 aa14.95□□□□□ -0.02
CACNA1A-257ENST00000638009 Q8N9W7 124 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms