RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 Q0VG73 95 aa12.59□□□□□ -0.39
CLN6-221ENST00000637494 FER1L6-AS1Q8NA97 138 aa12.59□□□□□ -0.39
CLN6-221ENST00000637494 P01737 135 aa12.58□□□□□ -0.4
CLN6-221ENST00000637494 APOBP04114 4563 aaKnown RBP12.58□□□□□ -0.4
CLN6-221ENST00000637494 CACNG7P62955 275 aa12.58□□□□□ -0.4
CLN6-221ENST00000637494 VAX2Q9UIW0 290 aa12.58□□□□□ -0.4
CLN6-221ENST00000637494 RAB19A4D1S5 217 aa12.57□□□□□ -0.4
CLN6-221ENST00000637494 H7C1H1 209 aa12.57□□□□□ -0.4
CLN6-221ENST00000637494 LECT2O14960 151 aa12.57□□□□□ -0.4
CLN6-221ENST00000637494 CRPP02741 224 aa12.57□□□□□ -0.4
CLN6-221ENST00000637494 BCL2P10415 239 aa12.57□□□□□ -0.4
CLN6-221ENST00000637494 CHCHD5Q9BSY4 110 aa12.57□□□□□ -0.4
CLN6-221ENST00000637494 ABCA13Q86UQ4 5058 aa12.57□□□□□ -0.4
CLN6-221ENST00000637494 F2Z2F3 143 aa12.56□□□□□ -0.4
CLN6-221ENST00000637494 FAM229AH3BQW9 127 aa12.56□□□□□ -0.4
CLN6-221ENST00000637494 MGPP08493 103 aa12.56□□□□□ -0.4
CLN6-221ENST00000637494 GZMBP10144 247 aa12.56□□□□□ -0.4
CLN6-221ENST00000637494 Q5VSD8 79 aa12.56□□□□□ -0.4
CLN6-221ENST00000637494 Q8N976 141 aa12.56□□□□□ -0.4
CLN6-221ENST00000637494 BAALCQ8WXS3 180 aa12.56□□□□□ -0.4
CLN6-221ENST00000637494 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.55□□□□□ -0.4
CLN6-221ENST00000637494 IGLV2-8P01709 118 aa12.55□□□□□ -0.4
CLN6-221ENST00000637494 AKAP14Q86UN6 197 aa12.55□□□□□ -0.4
CLN6-221ENST00000637494 C19orf71A6NCJ1 209 aa12.54□□□□□ -0.4
CLN6-221ENST00000637494 SMR3BP02814 79 aaPredicted RBP12.54□□□□□ -0.4
CLN6-221ENST00000637494 TRGC1P0CF51 173 aa12.54□□□□□ -0.4
CLN6-221ENST00000637494 IGLC6P0CF74 106 aa12.54□□□□□ -0.4
CLN6-221ENST00000637494 WFDC2Q14508 124 aa12.54□□□□□ -0.4
CLN6-221ENST00000637494 DNAJC30Q96LL9 226 aa12.54□□□□□ -0.4
CLN6-221ENST00000637494 C1orf43Q9BWL3 253 aa12.54□□□□□ -0.4
CLN6-221ENST00000637494 KIF25-AS1Q9Y6Z4 181 aa12.54□□□□□ -0.4
CLN6-221ENST00000637494 ANGP03950 147 aaKnown RBP12.53□□□□□ -0.4
CLN6-221ENST00000637494 INAFM2P0DMQ5 153 aa12.53□□□□□ -0.4
CLN6-221ENST00000637494 Q6ZNX1 250 aa12.53□□□□□ -0.4
CLN6-221ENST00000637494 C15orf54Q8N8G6 183 aa12.53□□□□□ -0.4
CLN6-221ENST00000637494 TRBV25-1A0A075B6N4 114 aa12.52□□□□□ -0.41
CLN6-221ENST00000637494 BLOC1S1P78537 153 aa12.51□□□□□ -0.41
CLN6-221ENST00000637494 C14orf177Q52M58 125 aa12.51□□□□□ -0.41
CLN6-221ENST00000637494 MPV17L2Q567V2 206 aa12.51□□□□□ -0.41
CLN6-221ENST00000637494 ATRAIDQ6UW56 229 aa12.51□□□□□ -0.41
CLN6-221ENST00000637494 TRBV20OR9-2A0A075B6H5 130 aa12.5□□□□□ -0.41
CLN6-221ENST00000637494 HAMPP81172 84 aa12.5□□□□□ -0.41
CLN6-221ENST00000637494 LYZL1Q6UWQ5 148 aa12.5□□□□□ -0.41
CLN6-221ENST00000637494 DPH3P1Q9H4G8 78 aa12.5□□□□□ -0.41
CLN6-221ENST00000637494 IGHV1-24A0A0C4DH33 117 aa12.49□□□□□ -0.41
CLN6-221ENST00000637494 SUMO4Q6EEV6 95 aa12.49□□□□□ -0.41
CLN6-221ENST00000637494 NUDT10Q8NFP7 164 aa12.49□□□□□ -0.41
CLN6-221ENST00000637494 NUDT11Q96G61 164 aa12.49□□□□□ -0.41
CLN6-221ENST00000637494 hCG_2014768A0A024R1R8 64 aa12.48□□□□□ -0.41
CLN6-221ENST00000637494 M0QY20 66 aa12.48□□□□□ -0.41
CLN6-221ENST00000637494 NTF3P20783 257 aa12.48□□□□□ -0.41
CLN6-221ENST00000637494 MIAQ16674 131 aa12.48□□□□□ -0.41
CLN6-221ENST00000637494 WDR73Q6P4I2 378 aa12.48□□□□□ -0.41
CLN6-221ENST00000637494 RASL11AQ6T310 242 aa12.48□□□□□ -0.41
CLN6-221ENST00000637494 ENHOQ6UWT2 76 aa12.48□□□□□ -0.41
CLN6-221ENST00000637494 C9orf62Q8N4C0 152 aa12.48□□□□□ -0.41
CLN6-221ENST00000637494 GAGE6Q13070 117 aa12.47□□□□□ -0.41
CLN6-221ENST00000637494 NTM-AS1Q6ZSK4 140 aa12.47□□□□□ -0.41
CLN6-221ENST00000637494 RPP21Q9H633 154 aaKnown RBP12.47□□□□□ -0.41
CLN6-221ENST00000637494 FAM30AQ9NZY2 134 aa12.47□□□□□ -0.41
CLN6-221ENST00000637494 NKX2-5P52952 324 aaPredicted RBP12.46□□□□□ -0.41
CLN6-221ENST00000637494 TWIST1Q15672 202 aa12.46□□□□□ -0.41
CLN6-221ENST00000637494 IQCJQ1A5X6 159 aa12.46□□□□□ -0.41
CLN6-221ENST00000637494 ALKAL2Q6UX46 152 aa12.46□□□□□ -0.41
CLN6-221ENST00000637494 TMEM250H0YL14 139 aa12.45□□□□□ -0.42
CLN6-221ENST00000637494 HLA-DQA1P01909 254 aa12.45□□□□□ -0.42
CLN6-221ENST00000637494 CTRLP40313 264 aa12.45□□□□□ -0.42
CLN6-221ENST00000637494 RBX1P62877 108 aa12.45□□□□□ -0.42
CLN6-221ENST00000637494 SMIM15Q7Z3B0 74 aa12.45□□□□□ -0.42
CLN6-221ENST00000637494 OCC1Q8TAD7 63 aa12.45□□□□□ -0.42
CLN6-221ENST00000637494 NIT2Q9NQR4 276 aa12.45□□□□□ -0.42
CLN6-221ENST00000637494 RNASE7Q9H1E1 156 aaKnown RBP12.44□□□□□ -0.42
CLN6-221ENST00000637494 UBE2L6O14933 153 aa12.43□□□□□ -0.42
CLN6-221ENST00000637494 Q6ZSA8 131 aa12.43□□□□□ -0.42
CLN6-221ENST00000637494 LINC00269Q8N2A0 174 aa12.43□□□□□ -0.42
CLN6-221ENST00000637494 TMEM243Q9BU79 118 aa12.43□□□□□ -0.42
CLN6-221ENST00000637494 K7EN84 100 aa12.42□□□□□ -0.42
CLN6-221ENST00000637494 GATCO43716 136 aaKnown RBP12.42□□□□□ -0.42
CLN6-221ENST00000637494 PLA2G1BP04054 148 aaKnown RBP12.42□□□□□ -0.42
CLN6-221ENST00000637494 CEBPGP53567 150 aa12.42□□□□□ -0.42
CLN6-221ENST00000637494 CLPSL2Q6UWE3 100 aa12.42□□□□□ -0.42
CLN6-221ENST00000637494 PGLYRP4Q96LB8 373 aa12.42□□□□□ -0.42
CLN6-221ENST00000637494 PRR34Q9NV39 138 aa12.42□□□□□ -0.42
CLN6-221ENST00000637494 COTL1Q14019 142 aa12.41□□□□□ -0.42
CLN6-221ENST00000637494 LINC01620Q4KN68 170 aa12.41□□□□□ -0.42
CLN6-221ENST00000637494 CNFNQ9BYD5 112 aa12.41□□□□□ -0.42
CLN6-221ENST00000637494 USP17L23D6RBM5 183 aa12.4□□□□□ -0.42
CLN6-221ENST00000637494 BORCS7Q96B45 105 aa12.4□□□□□ -0.42
CLN6-221ENST00000637494 EIF5A2Q9GZV4 153 aaKnown RBP12.4□□□□□ -0.42
CLN6-221ENST00000637494 A8MWL6 223 aa12.39□□□□□ -0.43
CLN6-221ENST00000637494 AMTP48728 403 aa12.39□□□□□ -0.43
CLN6-221ENST00000637494 REG3AQ06141 175 aa12.39□□□□□ -0.43
CLN6-221ENST00000637494 TRAV8-4A0A0B4J246 113 aa12.38□□□□□ -0.43
CLN6-221ENST00000637494 A0A1B0GUV1 79 aa12.38□□□□□ -0.43
CLN6-221ENST00000637494 TEX261Q6UWH6 196 aa12.38□□□□□ -0.43
CLN6-221ENST00000637494 FAM231DQ6ZW35 169 aa12.38□□□□□ -0.43
CLN6-221ENST00000637494 LINC00528Q8N1L1 170 aa12.38□□□□□ -0.43
CLN6-221ENST00000637494 LYPD6BQ8NI32 183 aa12.38□□□□□ -0.43
CLN6-221ENST00000637494 DGAT2L7PQ6IED9 249 aa12.36□□□□□ -0.43
CLN6-221ENST00000637494 SCXQ7RTU7 201 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms