RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 TMEM89A2RUT3 159 aa12.29□□□□□ -0.44
CLN5-208ENST00000636183 WISP2O76076 250 aa12.29□□□□□ -0.44
CLN5-208ENST00000636183 UBE2D2P62837 147 aa12.29□□□□□ -0.44
CLN5-208ENST00000636183 K7EMI3 77 aa12.29□□□□□ -0.44
CLN5-208ENST00000636183 SIVA1O15304 175 aa12.29□□□□□ -0.44
CLN5-208ENST00000636183 FSHBP01225 129 aa12.29□□□□□ -0.44
CLN5-208ENST00000636183 UBE2V1Q13404 147 aa12.29□□□□□ -0.44
CLN5-208ENST00000636183 IFITM1P13164 125 aa12.29□□□□□ -0.44
CLN5-208ENST00000636183 Q6ZTI0 123 aa12.29□□□□□ -0.44
CLN5-208ENST00000636183 POU2AF1Q16633 256 aa12.29□□□□□ -0.44
CLN5-208ENST00000636183 TNFRSF13BO14836 293 aaPredicted RBP12.28□□□□□ -0.44
CLN5-208ENST00000636183 COX8AP10176 69 aa12.28□□□□□ -0.44
CLN5-208ENST00000636183 COX7BP24311 80 aa12.28□□□□□ -0.44
CLN5-208ENST00000636183 RLFQ13129 1914 aa12.28□□□□□ -0.44
CLN5-208ENST00000636183 A0A0J9YWU9 116 aa12.28□□□□□ -0.44
CLN5-208ENST00000636183 ETDBQ3ZM63 59 aa12.28□□□□□ -0.44
CLN5-208ENST00000636183 OXLD1Q5BKU9 147 aa12.28□□□□□ -0.44
CLN5-208ENST00000636183 P0DMU3 169 aa12.27□□□□□ -0.44
CLN5-208ENST00000636183 FAM231AP0DMU4 169 aa12.27□□□□□ -0.44
CLN5-208ENST00000636183 FAM231CP0DMU5 169 aa12.27□□□□□ -0.44
CLN5-208ENST00000636183 IGKV2D-26A0A0A0MRZ7 120 aa12.27□□□□□ -0.44
CLN5-208ENST00000636183 NFE4Q86UQ8 179 aa12.27□□□□□ -0.44
CLN5-208ENST00000636183 MIR7-3HGQ8N6C7 128 aa12.27□□□□□ -0.44
CLN5-208ENST00000636183 K7EN84 100 aa12.27□□□□□ -0.45
CLN5-208ENST00000636183 POLR3KQ9Y2Y1 108 aaPredicted RBP12.27□□□□□ -0.45
CLN5-208ENST00000636183 C12orf74Q32Q52 190 aa12.26□□□□□ -0.45
CLN5-208ENST00000636183 TRBV10-2A0A0K0K1G8 114 aa12.26□□□□□ -0.45
CLN5-208ENST00000636183 H0YGX0 51 aa12.26□□□□□ -0.45
CLN5-208ENST00000636183 SVIPQ8NHG7 77 aa12.26□□□□□ -0.45
CLN5-208ENST00000636183 WNK1Q9H4A3 2382 aa12.26□□□□□ -0.45
CLN5-208ENST00000636183 SIP14410 1827 aa12.26□□□□□ -0.45
CLN5-208ENST00000636183 IGLV9-49A0A0B4J1Y8 123 aa12.25□□□□□ -0.45
CLN5-208ENST00000636183 LYRM9A8MSI8 78 aa12.25□□□□□ -0.45
CLN5-208ENST00000636183 C1orf147Q96MC9 270 aaPredicted RBP12.25□□□□□ -0.45
CLN5-208ENST00000636183 CEMP1Q6PRD7 247 aaPredicted RBP12.25□□□□□ -0.45
CLN5-208ENST00000636183 NOTCH2Q04721 2471 aa12.24□□□□□ -0.45
CLN5-208ENST00000636183 TANC1Q9C0D5 1861 aa12.24□□□□□ -0.45
CLN5-208ENST00000636183 Q6ZSV7 163 aa12.24□□□□□ -0.45
CLN5-208ENST00000636183 TP53TG3Q9ULZ0 132 aa12.24□□□□□ -0.45
CLN5-208ENST00000636183 LINC01548A6NM66 108 aa12.24□□□□□ -0.45
CLN5-208ENST00000636183 FAM236DA0A1B0GTK5 79 aa12.24□□□□□ -0.45
CLN5-208ENST00000636183 FAM236CP0DP71 79 aa12.24□□□□□ -0.45
CLN5-208ENST00000636183 TRBV6-1A0A0K0K1D8 114 aa12.24□□□□□ -0.45
CLN5-208ENST00000636183 NANOS2P60321 138 aaKnown RBP12.24□□□□□ -0.45
CLN5-208ENST00000636183 A0A0J9YX75 114 aa12.24□□□□□ -0.45
CLN5-208ENST00000636183 NLRC5Q86WI3 1866 aa12.23□□□□□ -0.45
CLN5-208ENST00000636183 F8W1H4 67 aa12.23□□□□□ -0.45
CLN5-208ENST00000636183 C20orf144Q9BQM9 153 aa12.23□□□□□ -0.45
CLN5-208ENST00000636183 KIF26AQ9ULI4 1882 aaPredicted RBP12.23□□□□□ -0.45
CLN5-208ENST00000636183 WI2-2373I1.2A0A1W2PRP0 233 aa12.23□□□□□ -0.45
CLN5-208ENST00000636183 IGLV2-8P01709 118 aa12.23□□□□□ -0.45
CLN5-208ENST00000636183 CHCHD10Q8WYQ3 142 aaPredicted RBP12.23□□□□□ -0.45
CLN5-208ENST00000636183 DLEU1O43261 78 aa12.23□□□□□ -0.45
CLN5-208ENST00000636183 PLA2G2EQ9NZK7 142 aa12.22□□□□□ -0.45
CLN5-208ENST00000636183 LOC105371267A0A1B0GV96 52 aa12.22□□□□□ -0.45
CLN5-208ENST00000636183 PSMB8P28062 276 aa12.22□□□□□ -0.45
CLN5-208ENST00000636183 H3BQ85 93 aa12.22□□□□□ -0.45
CLN5-208ENST00000636183 LMO4P61968 165 aa12.22□□□□□ -0.45
CLN5-208ENST00000636183 WFDC10BQ8IUB3 73 aa12.22□□□□□ -0.45
CLN5-208ENST00000636183 A0A1W2PPM0 123 aa12.21□□□□□ -0.45
CLN5-208ENST00000636183 DEFB114Q30KQ6 69 aa12.21□□□□□ -0.45
CLN5-208ENST00000636183 PYY3Q5JQD4 70 aa12.21□□□□□ -0.45
CLN5-208ENST00000636183 K7ERS5 55 aa12.21□□□□□ -0.45
CLN5-208ENST00000636183 USP17L23D6RBM5 183 aa12.21□□□□□ -0.46
CLN5-208ENST00000636183 TNRC6BQ9UPQ9 1833 aaKnown RBP12.2□□□□□ -0.46
CLN5-208ENST00000636183 SMIM9A6NGZ8 99 aa12.2□□□□□ -0.46
CLN5-208ENST00000636183 FBXL19-AS1Q494R0 122 aa12.2□□□□□ -0.46
CLN5-208ENST00000636183 PTPN13Q12923 2485 aa12.2□□□□□ -0.46
CLN5-208ENST00000636183 IGHV4-30-4P0DP06 118 aa12.2□□□□□ -0.46
CLN5-208ENST00000636183 MIFP14174 115 aa12.2□□□□□ -0.46
CLN5-208ENST00000636183 A4D1N5 150 aa12.2□□□□□ -0.46
CLN5-208ENST00000636183 SONP18583 2426 aaKnown RBP12.19□□□□□ -0.46
CLN5-208ENST00000636183 Q6ZUT4 128 aa12.19□□□□□ -0.46
CLN5-208ENST00000636183 SHANK1Q9Y566 2161 aa12.19□□□□□ -0.46
CLN5-208ENST00000636183 IGKV2-28A0A075B6P5 120 aa12.19□□□□□ -0.46
CLN5-208ENST00000636183 TRBV10-1A0A0K0K1A3 114 aa12.19□□□□□ -0.46
CLN5-208ENST00000636183 IGKV2D-28P01615 120 aa12.19□□□□□ -0.46
CLN5-208ENST00000636183 ADCYAP1P18509 176 aa12.19□□□□□ -0.46
CLN5-208ENST00000636183 XAGE1AQ9HD64 81 aa12.19□□□□□ -0.46
CLN5-208ENST00000636183 LINC01620Q4KN68 170 aa12.19□□□□□ -0.46
CLN5-208ENST00000636183 UFSP1Q6NVU6 142 aa12.18□□□□□ -0.46
CLN5-208ENST00000636183 ZFAND2AQ8N6M9 145 aa12.18□□□□□ -0.46
CLN5-208ENST00000636183 IGLV2-11P01706 119 aa12.18□□□□□ -0.46
CLN5-208ENST00000636183 UPK3BQ9BT76 320 aa12.18□□□□□ -0.46
CLN5-208ENST00000636183 MED14OSP0DP75 135 aa12.18□□□□□ -0.46
CLN5-208ENST00000636183 C10orf99Q6UWK7 81 aa12.18□□□□□ -0.46
CLN5-208ENST00000636183 TEX49A0A1B0GTD5 131 aa12.17□□□□□ -0.46
CLN5-208ENST00000636183 IL15RAQ13261 267 aa12.17□□□□□ -0.46
CLN5-208ENST00000636183 K7EP34 96 aa12.17□□□□□ -0.46
CLN5-208ENST00000636183 PATE2Q6UY27 113 aa12.17□□□□□ -0.46
CLN5-208ENST00000636183 LINC00322Q6ZN03 302 aaPredicted RBP12.17□□□□□ -0.46
CLN5-208ENST00000636183 DCANP1Q8TF63 244 aa12.17□□□□□ -0.46
CLN5-208ENST00000636183 KPRPQ5T749 579 aaPredicted RBP12.17□□□□□ -0.46
CLN5-208ENST00000636183 WFDC10AQ9H1F0 79 aa12.16□□□□□ -0.46
CLN5-208ENST00000636183 E7EUB6 86 aa12.16□□□□□ -0.46
CLN5-208ENST00000636183 CLEC2BQ92478 149 aa12.16□□□□□ -0.46
CLN5-208ENST00000636183 ZNF747Q9BV97 191 aa12.16□□□□□ -0.46
CLN5-208ENST00000636183 LY6LH3BQJ8 138 aa12.16□□□□□ -0.46
CLN5-208ENST00000636183 IGLV1-47P01700 117 aa12.16□□□□□ -0.46
CLN5-208ENST00000636183 IGLV3-1P01715 115 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms