RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 RAB19A4D1S5 217 aa5.09□□□□□ -1.59
TCF4-260ENST00000627685 K7EN84 100 aa5.09□□□□□ -1.59
TCF4-260ENST00000627685 PFDN1O60925 122 aa5.09□□□□□ -1.59
TCF4-260ENST00000627685 S100A9P06702 114 aaKnown RBP5.09□□□□□ -1.59
TCF4-260ENST00000627685 BCL2P10415 239 aa5.09□□□□□ -1.59
TCF4-260ENST00000627685 RAB5CP51148 216 aa5.09□□□□□ -1.59
TCF4-260ENST00000627685 NKX2-5P52952 324 aaPredicted RBP5.09□□□□□ -1.59
TCF4-260ENST00000627685 EIF5AP63241 154 aaKnown RBP5.09□□□□□ -1.59
TCF4-260ENST00000627685 MEF2BQ02080 365 aaPredicted RBP5.09□□□□□ -1.59
TCF4-260ENST00000627685 LELP1Q5T871 98 aa5.09□□□□□ -1.59
TCF4-260ENST00000627685 AKAP14Q86UN6 197 aa5.09□□□□□ -1.59
TCF4-260ENST00000627685 MAPKAPK5-AS1Q8N8E1 139 aa5.09□□□□□ -1.59
TCF4-260ENST00000627685 GTSF1LQ9H1H1 148 aa5.09□□□□□ -1.59
TCF4-260ENST00000627685 A0A087WWL8 130 aa5.08□□□□□ -1.6
TCF4-260ENST00000627685 TRAV8-6A0A0B4J262 113 aa5.08□□□□□ -1.6
TCF4-260ENST00000627685 IBA57-AS1B1ANH7 110 aa5.08□□□□□ -1.6
TCF4-260ENST00000627685 RHODO00212 210 aa5.08□□□□□ -1.6
TCF4-260ENST00000627685 OR5AL1P0C617 328 aa5.08□□□□□ -1.6
TCF4-260ENST00000627685 GZMBP10144 247 aa5.08□□□□□ -1.6
TCF4-260ENST00000627685 UBE2G1P62253 170 aa5.08□□□□□ -1.6
TCF4-260ENST00000627685 SUMO4Q6EEV6 95 aa5.08□□□□□ -1.6
TCF4-260ENST00000627685 BAGE2Q86Y30 109 aa5.08□□□□□ -1.6
TCF4-260ENST00000627685 OR10G8Q8NGN5 311 aa5.08□□□□□ -1.6
TCF4-260ENST00000627685 ATP6V0E2Q8NHE4 81 aa5.08□□□□□ -1.6
TCF4-260ENST00000627685 CTRLP40313 264 aa5.07□□□□□ -1.6
TCF4-260ENST00000627685 UBE2D3P61077 147 aa5.07□□□□□ -1.6
TCF4-260ENST00000627685 UBE2D2P62837 147 aa5.07□□□□□ -1.6
TCF4-260ENST00000627685 LAGE3Q14657 143 aa5.07□□□□□ -1.6
TCF4-260ENST00000627685 ALKAL2Q6UX46 152 aa5.07□□□□□ -1.6
TCF4-260ENST00000627685 NEXN-AS1Q8NBZ9 246 aa5.07□□□□□ -1.6
TCF4-260ENST00000627685 CNFNQ9BYD5 112 aa5.07□□□□□ -1.6
TCF4-260ENST00000627685 DNAH8Q96JB1 4490 aa5.07□□□□□ -1.6
TCF4-260ENST00000627685 A0A087WWC5 75 aa5.06□□□□□ -1.6
TCF4-260ENST00000627685 MUC21A0A0G2JKD1 596 aa5.06□□□□□ -1.6
TCF4-260ENST00000627685 MUC21A0A140T8X8 626 aa5.06□□□□□ -1.6
TCF4-260ENST00000627685 GAGE12JA6NER3 117 aa5.06□□□□□ -1.6
TCF4-260ENST00000627685 RBFOX3A6NFN3 312 aa5.06□□□□□ -1.6
TCF4-260ENST00000627685 M0R381 172 aa5.06□□□□□ -1.6
TCF4-260ENST00000627685 KRTAP10-1P60331 282 aa5.06□□□□□ -1.6
TCF4-260ENST00000627685 GAGE1Q13065 139 aa5.06□□□□□ -1.6
TCF4-260ENST00000627685 GAGE4Q13068 117 aa5.06□□□□□ -1.6
TCF4-260ENST00000627685 GAGE5Q13069 117 aa5.06□□□□□ -1.6
TCF4-260ENST00000627685 OR10J3Q5JRS4 329 aa5.06□□□□□ -1.6
TCF4-260ENST00000627685 NTM-AS1Q6ZSK4 140 aa5.06□□□□□ -1.6
TCF4-260ENST00000627685 ZFP82Q8N141 532 aa5.06□□□□□ -1.6
TCF4-260ENST00000627685 SMIM12Q96EX1 92 aa5.06□□□□□ -1.6
TCF4-260ENST00000627685 PHLDA3Q9Y5J5 127 aa5.06□□□□□ -1.6
TCF4-260ENST00000627685 VPS13BQ7Z7G8 4022 aa5.05□□□□□ -1.6
TCF4-260ENST00000627685 TRBV10-1A0A0K0K1A3 114 aa5.05□□□□□ -1.6
TCF4-260ENST00000627685 C9JQL5 133 aa5.05□□□□□ -1.6
TCF4-260ENST00000627685 XGP55808 180 aa5.05□□□□□ -1.6
TCF4-260ENST00000627685 FAM74A4Q5TZK3 123 aa5.05□□□□□ -1.6
TCF4-260ENST00000627685 EIF5AL1Q6IS14 154 aaKnown RBP5.05□□□□□ -1.6
TCF4-260ENST00000627685 KRTAP26-1Q6PEX3 210 aa5.05□□□□□ -1.6
TCF4-260ENST00000627685 GTSF1Q8WW33 167 aa5.05□□□□□ -1.6
TCF4-260ENST00000627685 VAX2Q9UIW0 290 aa5.05□□□□□ -1.6
TCF4-260ENST00000627685 M0QY20 66 aa5.04□□□□□ -1.6
TCF4-260ENST00000627685 PDE6DO43924 150 aa5.04□□□□□ -1.6
TCF4-260ENST00000627685 ATRAIDQ6UW56 229 aa5.04□□□□□ -1.6
TCF4-260ENST00000627685 DAZ4Q86SG3 579 aaKnown RBP5.04□□□□□ -1.6
TCF4-260ENST00000627685 NIT1Q86X76 327 aa5.04□□□□□ -1.6
TCF4-260ENST00000627685 CHCHD7Q9BUK0 85 aa5.04□□□□□ -1.6
TCF4-260ENST00000627685 TM2D2Q9BX73 214 aa5.04□□□□□ -1.6
TCF4-260ENST00000627685 DAZ3Q9NR90 486 aaKnown RBP5.04□□□□□ -1.6
TCF4-260ENST00000627685 TRAV8-3A0A0A6YYJ7 113 aa5.03□□□□□ -1.6
TCF4-260ENST00000627685 PSCAO43653 123 aa5.03□□□□□ -1.6
TCF4-260ENST00000627685 IGHV3-30P01768 117 aa5.03□□□□□ -1.6
TCF4-260ENST00000627685 IGHV3-33P01772 117 aa5.03□□□□□ -1.6
TCF4-260ENST00000627685 IGHV3-30-3P0DP02 117 aa5.03□□□□□ -1.6
TCF4-260ENST00000627685 IGHV3-30-5P0DP03 117 aa5.03□□□□□ -1.6
TCF4-260ENST00000627685 GNG4P50150 75 aa5.03□□□□□ -1.6
TCF4-260ENST00000627685 OCC1Q8TAD7 63 aa5.03□□□□□ -1.6
TCF4-260ENST00000627685 RNASE7Q9H1E1 156 aaKnown RBP5.03□□□□□ -1.6
TCF4-260ENST00000627685 TRBV7-3A0A075B6L6 115 aa5.02□□□□□ -1.61
TCF4-260ENST00000627685 TMEM250H0YL14 139 aa5.02□□□□□ -1.61
TCF4-260ENST00000627685 TEX46H3BTG2 121 aa5.02□□□□□ -1.61
TCF4-260ENST00000627685 NDUFS6O75380 124 aaKnown RBP5.02□□□□□ -1.61
TCF4-260ENST00000627685 GAS8-AS1O95177 125 aa5.02□□□□□ -1.61
TCF4-260ENST00000627685 NPSP0C0P6 89 aa5.02□□□□□ -1.61
TCF4-260ENST00000627685 RAB4BP61018 213 aa5.02□□□□□ -1.61
TCF4-260ENST00000627685 RPL36AP83881 106 aaKnown RBP5.02□□□□□ -1.61
TCF4-260ENST00000627685 Q8N814 137 aa5.02□□□□□ -1.61
TCF4-260ENST00000627685 OR2D3Q8NGH3 330 aa5.02□□□□□ -1.61
TCF4-260ENST00000627685 RPL36ALQ969Q0 106 aaKnown RBP5.02□□□□□ -1.61
TCF4-260ENST00000627685 IGLV5-52A0A0A0MRZ9 124 aa5.01□□□□□ -1.61
TCF4-260ENST00000627685 TRBV6-8A0A0A6YYG3 113 aa5.01□□□□□ -1.61
TCF4-260ENST00000627685 SRP19P09132 144 aaKnown RBP5.01□□□□□ -1.61
TCF4-260ENST00000627685 TAGLN2P37802 199 aaKnown RBP5.01□□□□□ -1.61
TCF4-260ENST00000627685 FOXA3P55318 350 aaPredicted RBP5.01□□□□□ -1.61
TCF4-260ENST00000627685 MPV17L2Q567V2 206 aa5.01□□□□□ -1.61
TCF4-260ENST00000627685 LYZL1Q6UWQ5 148 aa5.01□□□□□ -1.61
TCF4-260ENST00000627685 ENHOQ6UWT2 76 aa5.01□□□□□ -1.61
TCF4-260ENST00000627685 Q6ZSA8 131 aa5.01□□□□□ -1.61
TCF4-260ENST00000627685 FAM231DQ6ZW35 169 aa5.01□□□□□ -1.61
TCF4-260ENST00000627685 LINC01551Q86U37 167 aa5.01□□□□□ -1.61
TCF4-260ENST00000627685 FER1L6-AS1Q8NA97 138 aa5.01□□□□□ -1.61
TCF4-260ENST00000627685 FAM210AQ96ND0 272 aa5.01□□□□□ -1.61
TCF4-260ENST00000627685 AP1S3Q96PC3 154 aa5.01□□□□□ -1.61
TCF4-260ENST00000627685 TMEM70Q9BUB7 260 aa5.01□□□□□ -1.61
TCF4-260ENST00000627685 Q9HAA7 133 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms