RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 PMVKQ15126 192 aa9.78□□□□□ -0.84
CHD1L-210ENST00000622533 POM121L12Q8N7R1 296 aa9.78□□□□□ -0.84
CHD1L-210ENST00000622533 USMG5Q96IX5 58 aa9.78□□□□□ -0.84
CHD1L-210ENST00000622533 SOCS3O14543 225 aa9.77□□□□□ -0.84
CHD1L-210ENST00000622533 LMO4P61968 165 aa9.77□□□□□ -0.84
CHD1L-210ENST00000622533 GPHB5Q86YW7 130 aa9.77□□□□□ -0.84
CHD1L-210ENST00000622533 FAM19A4Q96LR4 140 aa9.77□□□□□ -0.84
CHD1L-210ENST00000622533 OPRPNQ99935 248 aaPredicted RBP9.77□□□□□ -0.84
CHD1L-210ENST00000622533 GNRH2O43555 120 aa9.77□□□□□ -0.85
CHD1L-210ENST00000622533 IGIPA6NJ69 53 aa9.76□□□□□ -0.85
CHD1L-210ENST00000622533 ATXN8Q156A1 80 aa9.76□□□□□ -0.85
CHD1L-210ENST00000622533 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.76□□□□□ -0.855e-13■■■■■ 29.8
CHD1L-210ENST00000622533 NXPH4O95158 308 aa9.76□□□□□ -0.85
CHD1L-210ENST00000622533 JPT2Q9H910 190 aa9.76□□□□□ -0.85
CHD1L-210ENST00000622533 USP9YO00507 2555 aaPredicted RBP9.76□□□□□ -0.85
CHD1L-210ENST00000622533 H3BMM0 161 aa9.76□□□□□ -0.85
CHD1L-210ENST00000622533 Q6Q795 121 aa9.76□□□□□ -0.85
CHD1L-210ENST00000622533 UBE2WQ96B02 151 aa9.76□□□□□ -0.85
CHD1L-210ENST00000622533 RNASE4P34096 147 aaKnown RBP9.75□□□□□ -0.85
CHD1L-210ENST00000622533 ZNF56Q15929 161 aa9.75□□□□□ -0.85
CHD1L-210ENST00000622533 DUX3Q96PT4 197 aa9.75□□□□□ -0.85
CHD1L-210ENST00000622533 UBTD1Q9HAC8 227 aa9.75□□□□□ -0.85
CHD1L-210ENST00000622533 ZNF580Q9UK33 172 aa9.75□□□□□ -0.85
CHD1L-210ENST00000622533 MUC4Q99102 2169 aa9.75□□□□□ -0.85
CHD1L-210ENST00000622533 IGHV4OR15-8A0A075B7B6 117 aa9.75□□□□□ -0.85
CHD1L-210ENST00000622533 A0A087WW49 117 aa9.75□□□□□ -0.85
CHD1L-210ENST00000622533 TMEM95Q3KNT9 176 aa9.75□□□□□ -0.85
CHD1L-210ENST00000622533 BPESC1Q9GZL8 116 aa9.75□□□□□ -0.85
CHD1L-210ENST00000622533 ADARB2-AS1A8MUL3 147 aa9.74□□□□□ -0.85
CHD1L-210ENST00000622533 TRIAP1O43715 76 aa9.74□□□□□ -0.85
CHD1L-210ENST00000622533 TMEM219Q86XT9 240 aa9.74□□□□□ -0.85
CHD1L-210ENST00000622533 TMEM141Q96I45 108 aa9.74□□□□□ -0.85
CHD1L-210ENST00000622533 PPDPFQ9H3Y8 114 aa9.74□□□□□ -0.85
CHD1L-210ENST00000622533 TNFRSF18Q9Y5U5 241 aa9.74□□□□□ -0.85
CHD1L-210ENST00000622533 LRRK2Q5S007 2527 aa9.74□□□□□ -0.85
CHD1L-210ENST00000622533 M0QXV9 152 aa9.74□□□□□ -0.85
CHD1L-210ENST00000622533 LGALS9O00182 355 aa9.74□□□□□ -0.85
CHD1L-210ENST00000622533 P0DMU3 169 aa9.74□□□□□ -0.85
CHD1L-210ENST00000622533 FAM231AP0DMU4 169 aa9.74□□□□□ -0.85
CHD1L-210ENST00000622533 FAM231CP0DMU5 169 aa9.74□□□□□ -0.85
CHD1L-210ENST00000622533 C2orf82Q6UX34 121 aa9.74□□□□□ -0.85
CHD1L-210ENST00000622533 UNQ9165/PRO28630Q6UXU0 137 aa9.74□□□□□ -0.85
CHD1L-210ENST00000622533 RNASE3P12724 160 aaKnown RBP9.73□□□□□ -0.85
CHD1L-210ENST00000622533 TRBV10-2A0A0K0K1G8 114 aa9.73□□□□□ -0.85
CHD1L-210ENST00000622533 A0A087WWL8 130 aa9.72□□□□□ -0.85
CHD1L-210ENST00000622533 RPL13AP40429 203 aaKnown RBP9.72□□□□□ -0.85
CHD1L-210ENST00000622533 RPL11P62913 178 aaKnown RBP9.72□□□□□ -0.85
CHD1L-210ENST00000622533 Q6ZSV7 163 aa9.72□□□□□ -0.85
CHD1L-210ENST00000622533 A0A1W2PPR1 153 aa9.72□□□□□ -0.85
CHD1L-210ENST00000622533 IGHV1-69P01742 117 aa9.72□□□□□ -0.85
CHD1L-210ENST00000622533 TLN2Q9Y4G6 2542 aa9.72□□□□□ -0.85
CHD1L-210ENST00000622533 A0A0B4J2C4 111 aa9.72□□□□□ -0.85
CHD1L-210ENST00000622533 F5H697 171 aa9.72□□□□□ -0.85
CHD1L-210ENST00000622533 F6UB75 175 aa9.72□□□□□ -0.85
CHD1L-210ENST00000622533 VCYO14598 125 aa9.72□□□□□ -0.85
CHD1L-210ENST00000622533 ZNF876PQ49A33 203 aa9.72□□□□□ -0.85
CHD1L-210ENST00000622533 TIMM17AQ99595 171 aa9.72□□□□□ -0.85
CHD1L-210ENST00000622533 MDFICQ9P1T7 246 aa9.72□□□□□ -0.85
CHD1L-210ENST00000622533 H7C423 109 aa9.71□□□□□ -0.85
CHD1L-210ENST00000622533 ID1P41134 155 aa9.71□□□□□ -0.85
CHD1L-210ENST00000622533 NPC2P61916 151 aa9.71□□□□□ -0.85
CHD1L-210ENST00000622533 VPREB3Q9UKI3 123 aa9.71□□□□□ -0.85
CHD1L-210ENST00000622533 ZNF256Q9Y2P7 627 aaPredicted RBP9.71□□□□□ -0.85
CHD1L-210ENST00000622533 ABCA12Q86UK0 2595 aa9.71□□□□□ -0.85
CHD1L-210ENST00000622533 CLEC2BQ92478 149 aa9.71□□□□□ -0.86
CHD1L-210ENST00000622533 LINC00527Q9UJ94 153 aa9.71□□□□□ -0.86
CHD1L-210ENST00000622533 KIF25-AS1Q9Y6Z4 181 aa9.71□□□□□ -0.86
CHD1L-210ENST00000622533 ZANQ9Y493 2812 aa9.71□□□□□ -0.86
CHD1L-210ENST00000622533 IGKV3-7A0A075B6H7 116 aa9.7□□□□□ -0.86
CHD1L-210ENST00000622533 TRBV12-3P01733 135 aa9.7□□□□□ -0.86
CHD1L-210ENST00000622533 IGHG2P01859 326 aa9.7□□□□□ -0.86
CHD1L-210ENST00000622533 PRSS2P07478 247 aa9.7□□□□□ -0.86
CHD1L-210ENST00000622533 USP9XQ93008 2570 aaPredicted RBP9.7□□□□□ -0.86
CHD1L-210ENST00000622533 KLLNB2CW77 178 aa9.7□□□□□ -0.86
CHD1L-210ENST00000622533 POLR2KP53803 58 aaKnown RBP9.7□□□□□ -0.86
CHD1L-210ENST00000622533 SUMO4Q6EEV6 95 aa9.7□□□□□ -0.86
CHD1L-210ENST00000622533 RHPN1-AS1Q9BWJ2 59 aa9.7□□□□□ -0.86
CHD1L-210ENST00000622533 DAZ1Q9NQZ3 744 aaKnown RBP9.7□□□□□ -0.86
CHD1L-210ENST00000622533 SETD2Q9BYW2 2564 aaPredicted RBP9.7□□□□□ -0.86
CHD1L-210ENST00000622533 LINC00315P59091 139 aa9.69□□□□□ -0.86
CHD1L-210ENST00000622533 TMEM223A0PJW6 202 aa9.69□□□□□ -0.86
CHD1L-210ENST00000622533 SDHAF1A6NFY7 115 aa9.69□□□□□ -0.86
CHD1L-210ENST00000622533 LEPROTO15243 131 aa9.69□□□□□ -0.86
CHD1L-210ENST00000622533 ZNF22P17026 224 aaPredicted RBP9.69□□□□□ -0.86
CHD1L-210ENST00000622533 LINC01587Q99440 93 aa9.69□□□□□ -0.86
CHD1L-210ENST00000622533 IGSF10Q6WRI0 2623 aa9.69□□□□□ -0.86
CHD1L-210ENST00000622533 LY6DQ14210 128 aa9.69□□□□□ -0.86
CHD1L-210ENST00000622533 TRBV6-5A0A0K0K1A5 114 aa9.68□□□□□ -0.86
CHD1L-210ENST00000622533 K7EMT4 169 aa9.68□□□□□ -0.86
CHD1L-210ENST00000622533 FAM74A4Q5TZK3 123 aa9.68□□□□□ -0.86
CHD1L-210ENST00000622533 CSPG4Q6UVK1 2322 aa9.68□□□□□ -0.86
CHD1L-210ENST00000622533 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.68□□□□□ -0.86
CHD1L-210ENST00000622533 A0A0J9YXV3 536 aa9.67□□□□□ -0.86
CHD1L-210ENST00000622533 TRBV30A0A0K0K1B3 111 aa9.67□□□□□ -0.86
CHD1L-210ENST00000622533 PF4V1P10720 104 aa9.67□□□□□ -0.86
CHD1L-210ENST00000622533 A0A0J9YXY3 114 aa9.67□□□□□ -0.86
CHD1L-210ENST00000622533 TRBV27A0A0K0K1C4 114 aa9.67□□□□□ -0.86
CHD1L-210ENST00000622533 CEMP1Q6PRD7 247 aaPredicted RBP9.67□□□□□ -0.86
CHD1L-210ENST00000622533 ICOSQ9Y6W8 199 aa9.67□□□□□ -0.86
CHD1L-210ENST00000622533 PRRC2AP48634 2157 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms