RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 LEPROTO15243 131 aa7.04□□□□□ -1.28
GGA3-223ENST00000621870 NPSP0C0P6 89 aa7.04□□□□□ -1.28
GGA3-223ENST00000621870 P0C879 139 aa7.04□□□□□ -1.28
GGA3-223ENST00000621870 AMTNQ6UX39 209 aa7.04□□□□□ -1.28
GGA3-223ENST00000621870 Q6ZS46 218 aa7.04□□□□□ -1.28
GGA3-223ENST00000621870 LINC00482Q8N8I6 264 aa7.04□□□□□ -1.28
GGA3-223ENST00000621870 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.04□□□□□ -1.28
GGA3-223ENST00000621870 IGLL5B9A064 214 aa7.04□□□□□ -1.28
GGA3-223ENST00000621870 TMEM141Q96I45 108 aa7.04□□□□□ -1.28
GGA3-223ENST00000621870 C20orf78Q9BR46 151 aa7.04□□□□□ -1.28
GGA3-223ENST00000621870 ICOSQ9Y6W8 199 aa7.04□□□□□ -1.28
GGA3-223ENST00000621870 IGLC2P0DOY2 106 aa7.04□□□□□ -1.28
GGA3-223ENST00000621870 MPV17L2Q567V2 206 aa7.04□□□□□ -1.28
GGA3-223ENST00000621870 NDUFA12Q9UI09 145 aa7.04□□□□□ -1.28
GGA3-223ENST00000621870 F8W735 103 aaPredicted RBP7.04□□□□□ -1.28
GGA3-223ENST00000621870 LY6LH3BQJ8 138 aa7.04□□□□□ -1.28
GGA3-223ENST00000621870 DEFB114Q30KQ6 69 aa7.04□□□□□ -1.28
GGA3-223ENST00000621870 NKAPP1Q8N9T2 125 aa7.04□□□□□ -1.28
GGA3-223ENST00000621870 MDFICQ9P1T7 246 aa7.04□□□□□ -1.28
GGA3-223ENST00000621870 LAMTOR3Q9UHA4 124 aa7.04□□□□□ -1.28
GGA3-223ENST00000621870 HILS1P60008 231 aa7.03□□□□□ -1.28
GGA3-223ENST00000621870 HHLA3Q9XRX5 114 aa7.03□□□□□ -1.28
GGA3-223ENST00000621870 TEX48A0A1B0GUV7 120 aa7.03□□□□□ -1.28
GGA3-223ENST00000621870 C9orf47Q6ZRZ4 202 aa7.03□□□□□ -1.28
GGA3-223ENST00000621870 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.03□□□□□ -1.28
GGA3-223ENST00000621870 F8VRH5 84 aa7.03□□□□□ -1.28
GGA3-223ENST00000621870 ZNF295-AS1Q8N0V1 137 aa7.03□□□□□ -1.28
GGA3-223ENST00000621870 ZNF48Q96MX3 618 aaPredicted RBP7.03□□□□□ -1.28
GGA3-223ENST00000621870 TSPAN13O95857 204 aa7.02□□□□□ -1.29
GGA3-223ENST00000621870 COA6Q5JTJ3 125 aaKnown RBP7.02□□□□□ -1.29
GGA3-223ENST00000621870 SUMO4Q6EEV6 95 aa7.02□□□□□ -1.29
GGA3-223ENST00000621870 FAM110AQ9BQ89 295 aa7.02□□□□□ -1.29
GGA3-223ENST00000621870 C20orf144Q9BQM9 153 aa7.02□□□□□ -1.29
GGA3-223ENST00000621870 TRAV8-2A0A0B4J237 113 aa7.01□□□□□ -1.29
GGA3-223ENST00000621870 PRB2P02812 416 aaPredicted RBP7.01□□□□□ -1.29
GGA3-223ENST00000621870 ZNF503Q96F45 646 aa7.01□□□□□ -1.29
GGA3-223ENST00000621870 EDA2RQ9HAV5 297 aa7.01□□□□□ -1.29
GGA3-223ENST00000621870 K7EQG2 157 aa7.01□□□□□ -1.29
GGA3-223ENST00000621870 SPINK8P0C7L1 97 aa7.01□□□□□ -1.29
GGA3-223ENST00000621870 MUC4Q99102 2169 aa7.01□□□□□ -1.29
GGA3-223ENST00000621870 K7EQD1 137 aa7□□□□□ -1.29
GGA3-223ENST00000621870 ATXN8Q156A1 80 aa7□□□□□ -1.29
GGA3-223ENST00000621870 MRPL52Q86TS9 123 aaKnown RBP7□□□□□ -1.29
GGA3-223ENST00000621870 KLF12Q9Y4X4 402 aa7□□□□□ -1.29
GGA3-223ENST00000621870 F8WEM9 126 aa7□□□□□ -1.29
GGA3-223ENST00000621870 FLNAP21333 2647 aaKnown RBP7□□□□□ -1.29
GGA3-223ENST00000621870 HERVK_113P63121 156 aa7□□□□□ -1.29
GGA3-223ENST00000621870 SAMD5Q5TGI4 173 aa7□□□□□ -1.29
GGA3-223ENST00000621870 NUP210LQ5VU65 1888 aa7□□□□□ -1.29
GGA3-223ENST00000621870 ZNF702PQ9H963 129 aa7□□□□□ -1.29
GGA3-223ENST00000621870 KLK12Q9UKR0 248 aa7□□□□□ -1.29
GGA3-223ENST00000621870 CRYGBP07316 175 aa7□□□□□ -1.29
GGA3-223ENST00000621870 FAM222AQ5U5X8 452 aa7□□□□□ -1.29
GGA3-223ENST00000621870 Q6ZWC4 215 aa7□□□□□ -1.29
GGA3-223ENST00000621870 C11orf45Q8TAV5 145 aa7□□□□□ -1.29
GGA3-223ENST00000621870 PRO0255Q9UI72 69 aa7□□□□□ -1.29
GGA3-223ENST00000621870 ITPR3Q14573 2671 aa7□□□□□ -1.29
GGA3-223ENST00000621870 UBE2BP63146 152 aa6.99□□□□□ -1.29
GGA3-223ENST00000621870 OXLD1Q5BKU9 147 aa6.99□□□□□ -1.29
GGA3-223ENST00000621870 C18orf65Q6ZTR6 163 aa6.99□□□□□ -1.29
GGA3-223ENST00000621870 TMEM263Q8WUH6 116 aaKnown RBP6.99□□□□□ -1.29
GGA3-223ENST00000621870 YPEL4Q96NS1 127 aa6.99□□□□□ -1.29
GGA3-223ENST00000621870 PSMG3-AS1Q96PY0 264 aa6.99□□□□□ -1.29
GGA3-223ENST00000621870 TRBV7-3A0A075B6L6 115 aa6.99□□□□□ -1.29
GGA3-223ENST00000621870 ANKRD39Q53RE8 183 aa6.99□□□□□ -1.29
GGA3-223ENST00000621870 Q6ZTI0 123 aa6.99□□□□□ -1.29
GGA3-223ENST00000621870 VSIG2Q96IQ7 327 aa6.99□□□□□ -1.29
GGA3-223ENST00000621870 DKK2Q9UBU2 259 aa6.99□□□□□ -1.29
GGA3-223ENST00000621870 KLK5Q9Y337 293 aaPredicted RBP6.99□□□□□ -1.29
GGA3-223ENST00000621870 TRAV8-3A0A0A6YYJ7 113 aa6.98□□□□□ -1.29
GGA3-223ENST00000621870 A0A0J9YXV3 536 aa6.98□□□□□ -1.29
GGA3-223ENST00000621870 J3QQQ9 107 aa6.98□□□□□ -1.29
GGA3-223ENST00000621870 PSMB8P28062 276 aa6.98□□□□□ -1.29
GGA3-223ENST00000621870 GTSF1Q8WW33 167 aa6.98□□□□□ -1.29
GGA3-223ENST00000621870 KIR2DL5BA0A0G2JN68 375 aa6.98□□□□□ -1.29
GGA3-223ENST00000621870 KIR2DL5BA0A0G2JPC4 375 aa6.98□□□□□ -1.29
GGA3-223ENST00000621870 LGALS9O00182 355 aa6.98□□□□□ -1.29
GGA3-223ENST00000621870 TTC32Q5I0X7 151 aa6.98□□□□□ -1.29
GGA3-223ENST00000621870 SH2D6Q7Z4S9 175 aa6.98□□□□□ -1.29
GGA3-223ENST00000621870 KIR2DL5AQ8N109 375 aa6.98□□□□□ -1.29
GGA3-223ENST00000621870 CAMK2N2Q96S95 79 aa6.98□□□□□ -1.29
GGA3-223ENST00000621870 WFDC10AQ9H1F0 79 aa6.98□□□□□ -1.29
GGA3-223ENST00000621870 FRYQ5TBA9 3013 aa6.98□□□□□ -1.29
GGA3-223ENST00000621870 FGF6P10767 208 aa6.98□□□□□ -1.29
GGA3-223ENST00000621870 TRAV26-1A0A087WT03 109 aa6.97□□□□□ -1.29
GGA3-223ENST00000621870 ZNF80P51504 273 aaPredicted RBP6.97□□□□□ -1.29
GGA3-223ENST00000621870 RPL39P62891 51 aaKnown RBP6.97□□□□□ -1.29
GGA3-223ENST00000621870 STAB1Q9NY15 2570 aa6.97□□□□□ -1.29
GGA3-223ENST00000621870 DAZ2Q13117 558 aaKnown RBP6.97□□□□□ -1.29
GGA3-223ENST00000621870 EIF4EBP1Q13541 118 aaPredicted RBP6.97□□□□□ -1.29
GGA3-223ENST00000621870 DAZ4Q86SG3 579 aaKnown RBP6.97□□□□□ -1.29
GGA3-223ENST00000621870 TMEM126AQ9H061 195 aa6.97□□□□□ -1.29
GGA3-223ENST00000621870 C11orf1Q9H5F2 150 aa6.97□□□□□ -1.29
GGA3-223ENST00000621870 DAZ3Q9NR90 486 aaKnown RBP6.97□□□□□ -1.29
GGA3-223ENST00000621870 NUPR1O60356 82 aa6.97□□□□□ -1.29
GGA3-223ENST00000621870 UBE2V1Q13404 147 aa6.97□□□□□ -1.29
GGA3-223ENST00000621870 KIR3DS1Q14943 382 aa6.97□□□□□ -1.29
GGA3-223ENST00000621870 LGALS9BQ3B8N2 356 aa6.97□□□□□ -1.29
GGA3-223ENST00000621870 LGALS9CQ6DKI2 356 aa6.97□□□□□ -1.29
GGA3-223ENST00000621870 BOD1L2Q8IYS8 172 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms