RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 MYOFQ9NZM1 2061 aa1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 PLEKHH2Q8IVE3 1493 aa1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 ARHGAP35Q9NRY4 1499 aa1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 TNS1Q9HBL0 1735 aaKnown RBP1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 NWD2Q9ULI1 1742 aa1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 SCAPERQ9BY12 1400 aa1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 SAMD9LQ8IVG5 1584 aa1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 UGGT1Q9NYU2 1555 aa1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 UTRNP46939 3433 aa1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 ASXL1Q8IXJ9 1541 aa1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 F8W1H4 67 aa1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 SLC25A6P12236 298 aa1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 PIPP12273 146 aaPredicted RBP1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 POLR2JP52435 117 aaKnown RBP1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 UBE2G1P62253 170 aa1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 SPANXN1Q5VSR9 72 aa1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 CSAG1Q6PB30 78 aa1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 Q8N8P6 123 aa1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 ZNF563Q8TA94 476 aa1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 LINC00052Q96N35 136 aa1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 SPANXDQ9BXN6 97 aa1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 NUP188Q5SRE5 1749 aa1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 ABCA3Q99758 1704 aa1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 FREM1Q5H8C1 2179 aa1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 NCOA2Q15596 1464 aa1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 ABCC5O15440 1437 aa1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 PTPN23Q9H3S7 1636 aa1.22□□□□□ -2.21
SCAMP1-205ENST00000614488 INO80Q9ULG1 1556 aaPredicted RBP1.21□□□□□ -2.22
SCAMP1-205ENST00000614488 CASP8AP2Q9UKL3 1982 aa1.21□□□□□ -2.22
SCAMP1-205ENST00000614488 QSER1Q2KHR3 1735 aa1.21□□□□□ -2.22
SCAMP1-205ENST00000614488 FAM24AA6NFZ4 105 aa1.21□□□□□ -2.22
SCAMP1-205ENST00000614488 CCL16O15467 120 aa1.21□□□□□ -2.22
SCAMP1-205ENST00000614488 GYPBP06028 91 aa1.21□□□□□ -2.22
SCAMP1-205ENST00000614488 SNCAP37840 140 aa1.21□□□□□ -2.22
SCAMP1-205ENST00000614488 RPL7L1Q6DKI1 246 aaKnown RBP1.21□□□□□ -2.22
SCAMP1-205ENST00000614488 UNQ5815/PRO19632Q6UWF5 114 aa1.21□□□□□ -2.22
SCAMP1-205ENST00000614488 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.21□□□□□ -2.22
SCAMP1-205ENST00000614488 SPTSSBQ8NFR3 76 aa1.21□□□□□ -2.22
SCAMP1-205ENST00000614488 OR10AG1Q8NH19 301 aa1.21□□□□□ -2.22
SCAMP1-205ENST00000614488 ZNF431Q8TF32 576 aaPredicted RBP1.21□□□□□ -2.22
SCAMP1-205ENST00000614488 TMEM141Q96I45 108 aa1.21□□□□□ -2.22
SCAMP1-205ENST00000614488 LIMD2Q9BT23 127 aa1.21□□□□□ -2.22
SCAMP1-205ENST00000614488 Q9H521 79 aa1.21□□□□□ -2.22
SCAMP1-205ENST00000614488 ORMDL1Q9P0S3 153 aa1.21□□□□□ -2.22
SCAMP1-205ENST00000614488 TMEM131LA2VDJ0 1609 aa1.21□□□□□ -2.22
SCAMP1-205ENST00000614488 ADGRB2O60241 1585 aa1.21□□□□□ -2.22
SCAMP1-205ENST00000614488 SYCP2Q9BX26 1530 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 PATJQ8NI35 1801 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 BRWD1Q9NSI6 2320 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 PREX2Q70Z35 1606 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 TCRBV3S1A0A5B6 114 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 TMEM30CPA0ZSE6 113 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 A6NIN4 97 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 H3BRM9 83 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 COX7CP15954 63 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 UBA52P62987 128 aaKnown RBP1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 RHOHQ15669 191 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 FAM74A1Q5RGS3 127 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 LYPD5Q6UWN5 251 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 C4orf33Q8N1A6 199 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 PATE1Q8WXA2 126 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 AQP10Q96PS8 301 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 DPH3P1Q9H4G8 78 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 CDC42SE1Q9NRR8 79 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 C10orf71Q711Q0 1435 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 MAST1Q9Y2H9 1570 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 UNC13CQ8NB66 2214 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 ARAP2Q8WZ64 1704 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 KIAA1551Q9HCM1 1747 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 EFCAB6Q5THR3 1501 aa1.2□□□□□ -2.22
SCAMP1-205ENST00000614488 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 SNRNP200O75643 2136 aaKnown RBP1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 CICQ96RK0 1608 aaPredicted RBP1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 EIF2AK4Q9P2K8 1649 aaKnown RBP1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 TCHHQ07283 1943 aa1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 FN1P02751 2386 aaKnown RBP1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 TRAV2A0A0B4J234 112 aa1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 RBAKDNA6NC62 111 aa1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 TMEM262E9PQX1 116 aa1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 MT-ATP8P03928 68 aa1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 C9orf116Q5BN46 136 aaPredicted RBP1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 C10orf55Q5SWW7 151 aa1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 C12orf73Q69YU5 71 aa1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 SLC48A1Q6P1K1 146 aa1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 C9orf62Q8N4C0 152 aa1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 C15orf53Q8NAA6 179 aa1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 C4orf3Q8WVX3 66 aa1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 PPDPFLQ8WWR9 84 aa1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 REG4Q9BYZ8 158 aa1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 ZGRF1Q86YA3 2104 aa1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 MYOM1P52179 1685 aa1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 SDK1Q7Z5N4 2213 aa1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 LAMB1P07942 1786 aa1.19□□□□□ -2.22
SCAMP1-205ENST00000614488 CDC42BPAQ5VT25 1732 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 ESPL1Q14674 2120 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 SBF2Q86WG5 1849 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 TRBV6-5A0A0K0K1A5 114 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 CXorf51AA0A1B0GTR3 108 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 DNAL4O96015 105 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 PPYP01298 95 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms