RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 TRBV7-3A0A075B6L6 115 aa10.44□□□□□ -0.74
GGA3-220ENST00000613421 C5orf38Q86SI9 138 aa10.44□□□□□ -0.74
GGA3-220ENST00000613421 C20orf203Q8NBC4 194 aa10.44□□□□□ -0.74
GGA3-220ENST00000613421 C20orf173Q96LM9 149 aa10.43□□□□□ -0.74
GGA3-220ENST00000613421 C9orf66Q5T8R8 295 aa10.43□□□□□ -0.74
GGA3-220ENST00000613421 Q6ZQT7 251 aa10.43□□□□□ -0.74
GGA3-220ENST00000613421 IGF2RP11717 2491 aa10.43□□□□□ -0.74
GGA3-220ENST00000613421 NOTCH2Q04721 2471 aa10.43□□□□□ -0.74
GGA3-220ENST00000613421 GYPEP15421 78 aa10.43□□□□□ -0.74
GGA3-220ENST00000613421 Q8N6K4 173 aa10.42□□□□□ -0.74
GGA3-220ENST00000613421 ATP6V0E2Q8NHE4 81 aa10.42□□□□□ -0.74
GGA3-220ENST00000613421 ODF3Q96PU9 254 aa10.42□□□□□ -0.74
GGA3-220ENST00000613421 F8WEM9 126 aa10.42□□□□□ -0.74
GGA3-220ENST00000613421 CENPFP49454 3210 aa10.42□□□□□ -0.74
GGA3-220ENST00000613421 MAP6D1Q9H9H5 199 aa10.41□□□□□ -0.74
GGA3-220ENST00000613421 EDA2RQ9HAV5 297 aa10.41□□□□□ -0.74
GGA3-220ENST00000613421 NKAPP1Q8N9T2 125 aa10.41□□□□□ -0.74
GGA3-220ENST00000613421 EXPH5Q8NEV8 1989 aa10.41□□□□□ -0.74
GGA3-220ENST00000613421 CRLF1O75462 422 aa10.4□□□□□ -0.74
GGA3-220ENST00000613421 EML5Q05BV3 1969 aa10.4□□□□□ -0.74
GGA3-220ENST00000613421 K7EQG2 157 aa10.4□□□□□ -0.74
GGA3-220ENST00000613421 OPRPNQ99935 248 aaPredicted RBP10.4□□□□□ -0.74
GGA3-220ENST00000613421 ICOSQ9Y6W8 199 aa10.4□□□□□ -0.74
GGA3-220ENST00000613421 NAV3Q8IVL0 2385 aa10.4□□□□□ -0.74
GGA3-220ENST00000613421 WNK1Q9H4A3 2382 aa10.4□□□□□ -0.74
GGA3-220ENST00000613421 ANKRD29Q8N6D5 301 aa10.4□□□□□ -0.75
GGA3-220ENST00000613421 CITED2Q99967 270 aaPredicted RBP10.4□□□□□ -0.75
GGA3-220ENST00000613421 U3KQK5 164 aa10.4□□□□□ -0.75
GGA3-220ENST00000613421 LGALS9O00182 355 aa10.39□□□□□ -0.75
GGA3-220ENST00000613421 VSIG2Q96IQ7 327 aa10.39□□□□□ -0.75
GGA3-220ENST00000613421 WFDC2Q14508 124 aa10.39□□□□□ -0.75
GGA3-220ENST00000613421 TLN1Q9Y490 2541 aaKnown RBP10.39□□□□□ -0.75
GGA3-220ENST00000613421 PIFOQ8TCI5 191 aa10.39□□□□□ -0.75
GGA3-220ENST00000613421 Q6YL49 198 aa10.38□□□□□ -0.75
GGA3-220ENST00000613421 ZFAND2AQ8N6M9 145 aa10.38□□□□□ -0.75
GGA3-220ENST00000613421 COX7B2Q8TF08 81 aa10.38□□□□□ -0.75
GGA3-220ENST00000613421 BAALC-AS2P0C853 105 aa10.38□□□□□ -0.75
GGA3-220ENST00000613421 RNF185Q96GF1 192 aa10.38□□□□□ -0.75
GGA3-220ENST00000613421 TP73-AS1Q9UF72 201 aa10.38□□□□□ -0.75
GGA3-220ENST00000613421 DNAJC9-AS1A6NH13 148 aa10.38□□□□□ -0.75
GGA3-220ENST00000613421 DAND5Q8N907 189 aa10.38□□□□□ -0.75
GGA3-220ENST00000613421 UBL5Q9BZL1 73 aa10.38□□□□□ -0.75
GGA3-220ENST00000613421 NCOR2Q9Y618 2525 aa10.38□□□□□ -0.75
GGA3-220ENST00000613421 TMEM263Q8WUH6 116 aaKnown RBP10.38□□□□□ -0.75
GGA3-220ENST00000613421 IGHV1-58A0A0C4DH39 117 aa10.37□□□□□ -0.75
GGA3-220ENST00000613421 ATP5G1P05496 136 aa10.37□□□□□ -0.75
GGA3-220ENST00000613421 RPL32P62910 135 aaKnown RBP10.37□□□□□ -0.75
GGA3-220ENST00000613421 SND1-IT1Q9HBX3 110 aa10.37□□□□□ -0.75
GGA3-220ENST00000613421 TRAV4A0A0B4J268 109 aa10.37□□□□□ -0.75
GGA3-220ENST00000613421 C15orf53Q8NAA6 179 aa10.37□□□□□ -0.75
GGA3-220ENST00000613421 HIVEP2P31629 2446 aa10.37□□□□□ -0.75
GGA3-220ENST00000613421 IGHV4-31P0DP07 118 aa10.37□□□□□ -0.75
GGA3-220ENST00000613421 LINC01620Q4KN68 170 aa10.37□□□□□ -0.75
GGA3-220ENST00000613421 TEN1Q86WV5 123 aa10.37□□□□□ -0.75
GGA3-220ENST00000613421 LRRC75A-AS1Q8N1F1 130 aa10.37□□□□□ -0.75
GGA3-220ENST00000613421 PTPN13Q12923 2485 aa10.36□□□□□ -0.75
GGA3-220ENST00000613421 MRPL23Q16540 153 aaKnown RBP10.36□□□□□ -0.75
GGA3-220ENST00000613421 SPART-AS1P0CW21 52 aa10.36□□□□□ -0.75
GGA3-220ENST00000613421 NEXN-AS1Q8NBZ9 246 aa10.36□□□□□ -0.75
GGA3-220ENST00000613421 IGHV3-30-3P0DP02 117 aa10.36□□□□□ -0.75
GGA3-220ENST00000613421 CEMP1Q6PRD7 247 aaPredicted RBP10.36□□□□□ -0.75
GGA3-220ENST00000613421 HHLA3Q9XRX5 114 aa10.36□□□□□ -0.75
GGA3-220ENST00000613421 C9orf153Q5TBE3 101 aa10.36□□□□□ -0.75
GGA3-220ENST00000613421 TRBV10-1A0A0K0K1A3 114 aa10.35□□□□□ -0.75
GGA3-220ENST00000613421 P0DMU3 169 aa10.35□□□□□ -0.75
GGA3-220ENST00000613421 FAM231AP0DMU4 169 aa10.35□□□□□ -0.75
GGA3-220ENST00000613421 FAM231CP0DMU5 169 aa10.35□□□□□ -0.75
GGA3-220ENST00000613421 SPANXDQ9BXN6 97 aa10.35□□□□□ -0.75
GGA3-220ENST00000613421 TINCRA0A1B0GVN0 87 aa10.35□□□□□ -0.75
GGA3-220ENST00000613421 IGLV10-54A0A075B6I4 117 aa10.35□□□□□ -0.75
GGA3-220ENST00000613421 CLPSL1A2RUU4 121 aa10.35□□□□□ -0.75
GGA3-220ENST00000613421 COX7A2LO14548 114 aa10.35□□□□□ -0.75
GGA3-220ENST00000613421 RMI2Q96E14 147 aa10.35□□□□□ -0.75
GGA3-220ENST00000613421 CDSNQ15517 529 aa10.34□□□□□ -0.75
GGA3-220ENST00000613421 Q6ZUT4 128 aa10.34□□□□□ -0.75
GGA3-220ENST00000613421 ORMDL1Q9P0S3 153 aa10.34□□□□□ -0.75
GGA3-220ENST00000613421 TNRC6BQ9UPQ9 1833 aaKnown RBP10.34□□□□□ -0.75
GGA3-220ENST00000613421 DSCR8Q96T75 97 aa10.34□□□□□ -0.75
GGA3-220ENST00000613421 ARHGAP32A7KAX9 2087 aa10.33□□□□□ -0.76
GGA3-220ENST00000613421 NAV2Q8IVL1 2488 aa10.33□□□□□ -0.76
GGA3-220ENST00000613421 HIST2H2BCQ6DN03 193 aa10.33□□□□□ -0.76
GGA3-220ENST00000613421 PIEZO1Q92508 2521 aa10.33□□□□□ -0.76
GGA3-220ENST00000613421 IGKV2D-24A0A075B6R9 120 aa10.33□□□□□ -0.76
GGA3-220ENST00000613421 HAMPP81172 84 aa10.33□□□□□ -0.76
GGA3-220ENST00000613421 NDUFA11Q86Y39 141 aa10.33□□□□□ -0.76
GGA3-220ENST00000613421 ESM1Q9NQ30 184 aa10.33□□□□□ -0.76
GGA3-220ENST00000613421 H0YGX0 51 aa10.33□□□□□ -0.76
GGA3-220ENST00000613421 C10orf99Q6UWK7 81 aa10.33□□□□□ -0.76
GGA3-220ENST00000613421 DEFB114Q30KQ6 69 aa10.32□□□□□ -0.76
GGA3-220ENST00000613421 RBX1P62877 108 aa10.32□□□□□ -0.76
GGA3-220ENST00000613421 C11orf21Q9P2W6 132 aa10.31□□□□□ -0.76
GGA3-220ENST00000613421 IGKV2D-26A0A0A0MRZ7 120 aa10.31□□□□□ -0.76
GGA3-220ENST00000613421 FOXI1Q12951 378 aa10.31□□□□□ -0.76
GGA3-220ENST00000613421 DEFB135Q30KP9 77 aa10.31□□□□□ -0.76
GGA3-220ENST00000613421 ACYP1P07311 99 aa10.31□□□□□ -0.76
GGA3-220ENST00000613421 PSMB8P28062 276 aa10.31□□□□□ -0.76
GGA3-220ENST00000613421 LINC00310P59036 64 aa10.31□□□□□ -0.76
GGA3-220ENST00000613421 Q6ZTI0 123 aa10.31□□□□□ -0.76
GGA3-220ENST00000613421 C1orf43Q9BWL3 253 aa10.31□□□□□ -0.76
GGA3-220ENST00000613421 SS18L2Q9UHA2 77 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms