RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 TRIQKQ629K1 86 aa6.24□□□□□ -1.41
SSX3-204ENST00000612497 PQLC2Q6ZP29 291 aa6.24□□□□□ -1.41
SSX3-204ENST00000612497 C5orf17Q8NAS9 161 aa6.24□□□□□ -1.41
SSX3-204ENST00000612497 A0A1W2PPV4 95 aa6.23□□□□□ -1.41
SSX3-204ENST00000612497 GAGE12HA6NDE8 117 aa6.23□□□□□ -1.41
SSX3-204ENST00000612497 H3BMQ9 156 aa6.23□□□□□ -1.41
SSX3-204ENST00000612497 HMGB3O15347 200 aaKnown RBP6.23□□□□□ -1.41
SSX3-204ENST00000612497 MT-ND6P03923 174 aa6.23□□□□□ -1.41
SSX3-204ENST00000612497 RAB2AP61019 212 aa6.23□□□□□ -1.41
SSX3-204ENST00000612497 DNLZQ5SXM8 178 aa6.23□□□□□ -1.41
SSX3-204ENST00000612497 ZFP82Q8N141 532 aa6.23□□□□□ -1.41
SSX3-204ENST00000612497 PKIGQ9Y2B9 76 aa6.23□□□□□ -1.41
SSX3-204ENST00000612497 IGLV4-60A0A075B6I1 120 aa6.22□□□□□ -1.41
SSX3-204ENST00000612497 IGHV1-24A0A0C4DH33 117 aa6.22□□□□□ -1.41
SSX3-204ENST00000612497 KRBOX1C9JBD0 128 aa6.22□□□□□ -1.41
SSX3-204ENST00000612497 SULT1A2P50226 295 aa6.22□□□□□ -1.41
SSX3-204ENST00000612497 C1orf137Q5JT78 98 aa6.22□□□□□ -1.41
SSX3-204ENST00000612497 PRR27Q6MZM9 219 aa6.22□□□□□ -1.41
SSX3-204ENST00000612497 FER1L6-AS1Q8NA97 138 aa6.22□□□□□ -1.41
SSX3-204ENST00000612497 DIRC1Q969H9 104 aa6.22□□□□□ -1.41
SSX3-204ENST00000612497 IGLV1-50A0A075B6I6 118 aa6.21□□□□□ -1.42
SSX3-204ENST00000612497 F5H697 171 aa6.21□□□□□ -1.42
SSX3-204ENST00000612497 IL15RAQ13261 267 aa6.21□□□□□ -1.42
SSX3-204ENST00000612497 IQCJQ1A5X6 159 aa6.21□□□□□ -1.42
SSX3-204ENST00000612497 SUN5Q8TC36 379 aa6.21□□□□□ -1.42
SSX3-204ENST00000612497 AQP10Q96PS8 301 aa6.21□□□□□ -1.42
SSX3-204ENST00000612497 TMSB15BA0A087X1C1 80 aa6.2□□□□□ -1.42
SSX3-204ENST00000612497 TRAV1-1A0A0B4J248 108 aa6.2□□□□□ -1.42
SSX3-204ENST00000612497 TRAV34A0A0B4J273 112 aa6.2□□□□□ -1.42
SSX3-204ENST00000612497 IGKV3OR2-268A0A0C4DH90 116 aa6.2□□□□□ -1.42
SSX3-204ENST00000612497 A0A1B0GUV1 79 aa6.2□□□□□ -1.42
SSX3-204ENST00000612497 ARL14EPLP0DKL9 152 aa6.2□□□□□ -1.42
SSX3-204ENST00000612497 BTCP35070 178 aa6.2□□□□□ -1.42
SSX3-204ENST00000612497 SUMO1P63165 101 aaKnown RBP6.2□□□□□ -1.42
SSX3-204ENST00000612497 SCGB1C1Q8TD33 95 aa6.2□□□□□ -1.42
SSX3-204ENST00000612497 EPDR1Q9UM22 224 aa6.2□□□□□ -1.42
SSX3-204ENST00000612497 ARL2-SNX15V9GYD0 113 aa6.2□□□□□ -1.42
SSX3-204ENST00000612497 GVQW2A0A096LPI5 108 aaPredicted RBP6.19□□□□□ -1.42
SSX3-204ENST00000612497 UBE2D1P51668 147 aa6.19□□□□□ -1.42
SSX3-204ENST00000612497 SEC22CQ9BRL7 303 aa6.19□□□□□ -1.42
SSX3-204ENST00000612497 TRAV6A0A075B6T7 132 aa6.18□□□□□ -1.42
SSX3-204ENST00000612497 H0Y9J4 135 aa6.18□□□□□ -1.42
SSX3-204ENST00000612497 SH2D1AO60880 128 aa6.18□□□□□ -1.42
SSX3-204ENST00000612497 TSPAN13O95857 204 aa6.18□□□□□ -1.42
SSX3-204ENST00000612497 CRIP1P50238 77 aa6.18□□□□□ -1.42
SSX3-204ENST00000612497 CARD19Q96LW7 228 aa6.18□□□□□ -1.42
SSX3-204ENST00000612497 TMEM243Q9BU79 118 aa6.18□□□□□ -1.42
SSX3-204ENST00000612497 A0A1W2PNN7 141 aa6.17□□□□□ -1.42
SSX3-204ENST00000612497 IGLV7-43P04211 117 aa6.17□□□□□ -1.42
SSX3-204ENST00000612497 AMTP48728 403 aa6.17□□□□□ -1.42
SSX3-204ENST00000612497 PTTG1IPP53801 180 aa6.17□□□□□ -1.42
SSX3-204ENST00000612497 CYCSP99999 105 aaKnown RBP6.17□□□□□ -1.42
SSX3-204ENST00000612497 GAGE2BQ13066 116 aa6.17□□□□□ -1.42
SSX3-204ENST00000612497 LINC00526Q96FQ7 95 aa6.17□□□□□ -1.42
SSX3-204ENST00000612497 A6NHS1 94 aa6.16□□□□□ -1.42
SSX3-204ENST00000612497 UBE2L6O14933 153 aa6.16□□□□□ -1.42
SSX3-204ENST00000612497 GCHFRP30047 84 aa6.16□□□□□ -1.42
SSX3-204ENST00000612497 RPL13AP40429 203 aaKnown RBP6.16□□□□□ -1.42
SSX3-204ENST00000612497 LRRC37A5PQ49AS3 106 aa6.16□□□□□ -1.42
SSX3-204ENST00000612497 FAM162BQ5T6X4 162 aa6.16□□□□□ -1.42
SSX3-204ENST00000612497 CHCHD10Q8WYQ3 142 aaPredicted RBP6.16□□□□□ -1.42
SSX3-204ENST00000612497 SDHCQ99643 169 aaPredicted RBP6.16□□□□□ -1.42
SSX3-204ENST00000612497 ZNF471Q9BX82 626 aaPredicted RBP6.16□□□□□ -1.42
SSX3-204ENST00000612497 KRTAP4-9Q9BYQ8 210 aa6.16□□□□□ -1.42
SSX3-204ENST00000612497 SMIM3Q9BZL3 60 aa6.16□□□□□ -1.42
SSX3-204ENST00000612497 RBM38Q9H0Z9 239 aaKnown RBP6.16□□□□□ -1.42
SSX3-204ENST00000612497 RPL12P30050 165 aaKnown RBP6.15□□□□□ -1.42
SSX3-204ENST00000612497 CDC34P49427 236 aaPredicted RBP6.15□□□□□ -1.42
SSX3-204ENST00000612497 PHF5AQ7RTV0 110 aaKnown RBP6.15□□□□□ -1.42
SSX3-204ENST00000612497 Q86TA4 180 aa6.15□□□□□ -1.42
SSX3-204ENST00000612497 OR10AG1Q8NH19 301 aa6.15□□□□□ -1.42
SSX3-204ENST00000612497 KRTAP1-4P0C5Y4 121 aa6.14□□□□□ -1.43
SSX3-204ENST00000612497 H2AFB1P0C5Y9 115 aa6.14□□□□□ -1.43
SSX3-204ENST00000612497 H2AFB2P0C5Z0 115 aa6.14□□□□□ -1.43
SSX3-204ENST00000612497 STAG3L2P0CL84 134 aa6.14□□□□□ -1.43
SSX3-204ENST00000612497 STAG3L3P0CL85 134 aa6.14□□□□□ -1.43
SSX3-204ENST00000612497 PET100P0DJ07 73 aa6.14□□□□□ -1.43
SSX3-204ENST00000612497 SMIM17P0DL12 118 aa6.14□□□□□ -1.43
SSX3-204ENST00000612497 LINC01547P58512 204 aaPredicted RBP6.14□□□□□ -1.43
SSX3-204ENST00000612497 DEFA3P59666 94 aa6.14□□□□□ -1.43
SSX3-204ENST00000612497 SSTP61278 116 aa6.14□□□□□ -1.43
SSX3-204ENST00000612497 EIF5AP63241 154 aaKnown RBP6.14□□□□□ -1.43
SSX3-204ENST00000612497 C9orf116Q5BN46 136 aaPredicted RBP6.14□□□□□ -1.43
SSX3-204ENST00000612497 LOC107984640A0A0U1RRK4 108 aa6.13□□□□□ -1.43
SSX3-204ENST00000612497 MUC21A0A140T8X8 626 aa6.13□□□□□ -1.43
SSX3-204ENST00000612497 CCDC160A6NGH7 325 aa6.13□□□□□ -1.43
SSX3-204ENST00000612497 H0YIZ8 118 aa6.13□□□□□ -1.43
SSX3-204ENST00000612497 SYCNQ0VAF6 134 aa6.13□□□□□ -1.43
SSX3-204ENST00000612497 ZNF674Q2M3X9 581 aa6.13□□□□□ -1.43
SSX3-204ENST00000612497 RAB24Q969Q5 203 aa6.13□□□□□ -1.43
SSX3-204ENST00000612497 CDIP1Q9H305 208 aa6.13□□□□□ -1.43
SSX3-204ENST00000612497 TMEM167BQ9NRX6 74 aa6.13□□□□□ -1.43
SSX3-204ENST00000612497 NUDT15Q9NV35 164 aa6.13□□□□□ -1.43
SSX3-204ENST00000612497 MUC17Q685J3 4493 aa6.12□□□□□ -1.43
SSX3-204ENST00000612497 A0A087WZ39 114 aa6.12□□□□□ -1.43
SSX3-204ENST00000612497 PEX7O00628 323 aa6.12□□□□□ -1.43
SSX3-204ENST00000612497 SIX6O95475 246 aa6.12□□□□□ -1.43
SSX3-204ENST00000612497 FOXI1Q12951 378 aa6.12□□□□□ -1.43
SSX3-204ENST00000612497 SPANXN1Q5VSR9 72 aa6.12□□□□□ -1.43
SSX3-204ENST00000612497 ZFP30Q9Y2G7 519 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms