RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 C11orf71Q6IPW1 123 aa9.42□□□□□ -0.9
CDH1-212ENST00000611625 TRAV13-2A0A0B4J235 113 aa9.42□□□□□ -0.9
CDH1-212ENST00000611625 TMEM89A2RUT3 159 aa9.41□□□□□ -0.9
CDH1-212ENST00000611625 ZFAND2AQ8N6M9 145 aa9.41□□□□□ -0.9
CDH1-212ENST00000611625 C15orf53Q8NAA6 179 aa9.41□□□□□ -0.9
CDH1-212ENST00000611625 PIFOQ8TCI5 191 aa9.41□□□□□ -0.9
CDH1-212ENST00000611625 OPRPNQ99935 248 aaPredicted RBP9.41□□□□□ -0.9
CDH1-212ENST00000611625 FOXI1Q12951 378 aa9.41□□□□□ -0.9
CDH1-212ENST00000611625 LINC01620Q4KN68 170 aa9.41□□□□□ -0.9
CDH1-212ENST00000611625 NEXN-AS1Q8NBZ9 246 aa9.41□□□□□ -0.9
CDH1-212ENST00000611625 CCDC168Q8NDH2 2452 aa9.4□□□□□ -0.9
CDH1-212ENST00000611625 RBX1P62877 108 aa9.4□□□□□ -0.91
CDH1-212ENST00000611625 MAPKAPK5-AS1Q8N8E1 139 aa9.4□□□□□ -0.91
CDH1-212ENST00000611625 CCL24O00175 119 aa9.39□□□□□ -0.91
CDH1-212ENST00000611625 NXPH4O95158 308 aa9.39□□□□□ -0.91
CDH1-212ENST00000611625 SOCS3O14543 225 aa9.39□□□□□ -0.91
CDH1-212ENST00000611625 SLC25A29Q8N8R3 303 aa9.39□□□□□ -0.91
CDH1-212ENST00000611625 ICOSQ9Y6W8 199 aa9.39□□□□□ -0.91
CDH1-212ENST00000611625 NDUFA11Q86Y39 141 aa9.39□□□□□ -0.91
CDH1-212ENST00000611625 C11orf21Q9P2W6 132 aa9.39□□□□□ -0.91
CDH1-212ENST00000611625 IGHG4P01861 327 aa9.38□□□□□ -0.91
CDH1-212ENST00000611625 MRPS12O15235 138 aaKnown RBP9.38□□□□□ -0.91
CDH1-212ENST00000611625 HERV-K104P63124 156 aa9.38□□□□□ -0.91
CDH1-212ENST00000611625 PTH2Q96A98 100 aa9.38□□□□□ -0.91
CDH1-212ENST00000611625 C19orf84I3L1E1 186 aa9.38□□□□□ -0.91
CDH1-212ENST00000611625 GAS8-AS1O95177 125 aa9.38□□□□□ -0.91
CDH1-212ENST00000611625 TMEM61Q8N0U2 210 aa9.38□□□□□ -0.91
CDH1-212ENST00000611625 NRACQ8N912 160 aa9.37□□□□□ -0.91
CDH1-212ENST00000611625 EDA2RQ9HAV5 297 aa9.37□□□□□ -0.91
CDH1-212ENST00000611625 IGHV3-30-3P0DP02 117 aa9.37□□□□□ -0.91
CDH1-212ENST00000611625 DAD1P61803 113 aa9.37□□□□□ -0.91
CDH1-212ENST00000611625 DAND5Q8N907 189 aa9.37□□□□□ -0.91
CDH1-212ENST00000611625 SONP18583 2426 aaKnown RBP9.37□□□□□ -0.91
CDH1-212ENST00000611625 K7EQD1 137 aa9.37□□□□□ -0.91
CDH1-212ENST00000611625 C9orf153Q5TBE3 101 aa9.36□□□□□ -0.91
CDH1-212ENST00000611625 ATP6V0E2Q8NHE4 81 aa9.36□□□□□ -0.91
CDH1-212ENST00000611625 CNFNQ9BYD5 112 aa9.36□□□□□ -0.91
CDH1-212ENST00000611625 IGHV1-58A0A0C4DH39 117 aa9.36□□□□□ -0.91
CDH1-212ENST00000611625 F5H768 121 aa9.36□□□□□ -0.91
CDH1-212ENST00000611625 ODF3Q96PU9 254 aa9.36□□□□□ -0.91
CDH1-212ENST00000611625 COL4A2P08572 1712 aa9.36□□□□□ -0.91
CDH1-212ENST00000611625 Q71RC1 249 aaPredicted RBP9.36□□□□□ -0.91
CDH1-212ENST00000611625 K7EQG2 157 aa9.36□□□□□ -0.91
CDH1-212ENST00000611625 BAALC-AS2P0C853 105 aa9.35□□□□□ -0.91
CDH1-212ENST00000611625 DAZ2Q13117 558 aaKnown RBP9.35□□□□□ -0.91
CDH1-212ENST00000611625 DEFB113Q30KQ7 82 aa9.35□□□□□ -0.91
CDH1-212ENST00000611625 DAZ4Q86SG3 579 aaKnown RBP9.35□□□□□ -0.91
CDH1-212ENST00000611625 VSIG2Q96IQ7 327 aa9.35□□□□□ -0.91
CDH1-212ENST00000611625 DAZ3Q9NR90 486 aaKnown RBP9.35□□□□□ -0.91
CDH1-212ENST00000611625 TET2Q6N021 2002 aaPredicted RBP9.35□□□□□ -0.91
CDH1-212ENST00000611625 TNRC6BQ9UPQ9 1833 aaKnown RBP9.35□□□□□ -0.91
CDH1-212ENST00000611625 TRBV7-3A0A075B6L6 115 aa9.35□□□□□ -0.91
CDH1-212ENST00000611625 PRR9Q5T870 116 aa9.35□□□□□ -0.91
CDH1-212ENST00000611625 CEMP1Q6PRD7 247 aaPredicted RBP9.35□□□□□ -0.91
CDH1-212ENST00000611625 A0A096LPF7 62 aa9.35□□□□□ -0.91
CDH1-212ENST00000611625 CLPSL2Q6UWE3 100 aa9.34□□□□□ -0.91
CDH1-212ENST00000611625 C5orf38Q86SI9 138 aa9.34□□□□□ -0.91
CDH1-212ENST00000611625 ANKRD11Q6UB99 2663 aaPredicted RBP9.34□□□□□ -0.91
CDH1-212ENST00000611625 TCL1BO95988 128 aa9.34□□□□□ -0.91
CDH1-212ENST00000611625 MYO18BQ8IUG5 2567 aa9.34□□□□□ -0.91
CDH1-212ENST00000611625 XCL1P47992 114 aa9.34□□□□□ -0.91
CDH1-212ENST00000611625 BPTFQ12830 3046 aa9.33□□□□□ -0.92
CDH1-212ENST00000611625 SPANXB1Q9NS25 103 aaPredicted RBP9.33□□□□□ -0.92
CDH1-212ENST00000611625 A0A0J9YY99 117 aa9.33□□□□□ -0.92
CDH1-212ENST00000611625 P0DMU3 169 aa9.33□□□□□ -0.92
CDH1-212ENST00000611625 FAM231AP0DMU4 169 aa9.33□□□□□ -0.92
CDH1-212ENST00000611625 FAM231CP0DMU5 169 aa9.33□□□□□ -0.92
CDH1-212ENST00000611625 HIVEP2P31629 2446 aa9.33□□□□□ -0.92
CDH1-212ENST00000611625 TRBV10-2A0A0K0K1G8 114 aa9.33□□□□□ -0.92
CDH1-212ENST00000611625 CLPSL1A2RUU4 121 aa9.33□□□□□ -0.92
CDH1-212ENST00000611625 ANGP03950 147 aaKnown RBP9.33□□□□□ -0.92
CDH1-212ENST00000611625 CRYBA4P53673 196 aa9.33□□□□□ -0.92
CDH1-212ENST00000611625 C16orf74Q96GX8 76 aa9.33□□□□□ -0.92
CDH1-212ENST00000611625 Q6ZUT4 128 aa9.32□□□□□ -0.92
CDH1-212ENST00000611625 IGHV4-4A0A075B6R2 117 aa9.32□□□□□ -0.92
CDH1-212ENST00000611625 CITED1Q99966 193 aa9.32□□□□□ -0.92
CDH1-212ENST00000611625 SND1-IT1Q9HBX3 110 aa9.32□□□□□ -0.92
CDH1-212ENST00000611625 A0A0J9YXY3 114 aa9.32□□□□□ -0.92
CDH1-212ENST00000611625 LGALS9O00182 355 aa9.32□□□□□ -0.92
CDH1-212ENST00000611625 RNASE3P12724 160 aaKnown RBP9.32□□□□□ -0.92
CDH1-212ENST00000611625 DPH3Q96FX2 82 aa9.32□□□□□ -0.92
CDH1-212ENST00000611625 SPANXDQ9BXN6 97 aa9.32□□□□□ -0.92
CDH1-212ENST00000611625 HIVEP3Q5T1R4 2406 aa9.32□□□□□ -0.92
CDH1-212ENST00000611625 H3BT86 120 aa9.31□□□□□ -0.92
CDH1-212ENST00000611625 ZNF22P17026 224 aaPredicted RBP9.31□□□□□ -0.92
CDH1-212ENST00000611625 CDSNQ15517 529 aa9.31□□□□□ -0.92
CDH1-212ENST00000611625 ADAMTS20P59510 1910 aa9.31□□□□□ -0.92
CDH1-212ENST00000611625 CLEC2BQ92478 149 aa9.31□□□□□ -0.92
CDH1-212ENST00000611625 TRAV25A0A0B4J276 109 aa9.31□□□□□ -0.92
CDH1-212ENST00000611625 A0A0B4J2C4 111 aa9.31□□□□□ -0.92
CDH1-212ENST00000611625 B5MCH6 92 aa9.31□□□□□ -0.92
CDH1-212ENST00000611625 M0QY20 66 aa9.31□□□□□ -0.92
CDH1-212ENST00000611625 ACYP1P07311 99 aa9.31□□□□□ -0.92
CDH1-212ENST00000611625 MAP6D1Q9H9H5 199 aa9.31□□□□□ -0.92
CDH1-212ENST00000611625 PRB1P04280 392 aa9.3□□□□□ -0.92
CDH1-212ENST00000611625 IGLV4-3A0A075B6K6 122 aa9.3□□□□□ -0.92
CDH1-212ENST00000611625 F8W735 103 aaPredicted RBP9.3□□□□□ -0.92
CDH1-212ENST00000611625 C4orf3Q8WVX3 66 aa9.3□□□□□ -0.92
CDH1-212ENST00000611625 TRBV27A0A0K0K1C4 114 aa9.3□□□□□ -0.92
CDH1-212ENST00000611625 PRRC2CQ9Y520 2896 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms