RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 C9orf139Q6ZV77 190 aa8.93□□□□□ -0.98
TP53-220ENST00000610623 BEX4Q9NWD9 120 aaPredicted RBP8.93□□□□□ -0.98
TP53-220ENST00000610623 KIF25-AS1Q9Y6Z4 181 aa8.93□□□□□ -0.98
TP53-220ENST00000610623 MINOS1-NBL1R4GNA1 71 aa8.93□□□□□ -0.98
TP53-220ENST00000610623 SMG1Q96Q15 3661 aaKnown RBP8.93□□□□□ -0.98
TP53-220ENST00000610623 A0A1W2PPR1 153 aa8.93□□□□□ -0.98
TP53-220ENST00000610623 LINC00315P59091 139 aa8.93□□□□□ -0.98
TP53-220ENST00000610623 Q8N6K4 173 aa8.93□□□□□ -0.98
TP53-220ENST00000610623 FAM110DQ8TAY7 271 aaPredicted RBP8.93□□□□□ -0.98
TP53-220ENST00000610623 ICOSQ9Y6W8 199 aa8.93□□□□□ -0.98
TP53-220ENST00000610623 SPRY2O43597 315 aa8.92□□□□□ -0.98
TP53-220ENST00000610623 LCE2AQ5TA79 106 aaPredicted RBP8.92□□□□□ -0.98
TP53-220ENST00000610623 IGHV7-81A0A0B4J1V7 117 aa8.92□□□□□ -0.98
TP53-220ENST00000610623 TRBV27A0A0K0K1C4 114 aa8.92□□□□□ -0.98
TP53-220ENST00000610623 RNASE3P12724 160 aaKnown RBP8.92□□□□□ -0.98
TP53-220ENST00000610623 VMO1Q7Z5L0 202 aa8.92□□□□□ -0.98
TP53-220ENST00000610623 IGHV3OR16-13A0A075B7E8 117 aa8.91□□□□□ -0.98
TP53-220ENST00000610623 IGHV3-74A0A0B4J1X5 117 aa8.91□□□□□ -0.98
TP53-220ENST00000610623 A0A0J9YXY3 114 aa8.91□□□□□ -0.98
TP53-220ENST00000610623 OVOL1O14753 267 aa8.91□□□□□ -0.98
TP53-220ENST00000610623 IGF1P05019 195 aa8.91□□□□□ -0.98
TP53-220ENST00000610623 DUX3Q96PT4 197 aa8.91□□□□□ -0.98
TP53-220ENST00000610623 PLA2G2DQ9UNK4 145 aa8.91□□□□□ -0.98
TP53-220ENST00000610623 SPTBN4Q9H254 2564 aa8.91□□□□□ -0.98
TP53-220ENST00000610623 TRBV6-5A0A0K0K1A5 114 aa8.91□□□□□ -0.98
TP53-220ENST00000610623 SPANXCQ9NY87 97 aa8.91□□□□□ -0.98
TP53-220ENST00000610623 TRGV11A0A075B6L2 103 aa8.9□□□□□ -0.98
TP53-220ENST00000610623 LST1O00453 97 aa8.9□□□□□ -0.98
TP53-220ENST00000610623 ATP5G1P05496 136 aa8.9□□□□□ -0.98
TP53-220ENST00000610623 ZNF22P17026 224 aaPredicted RBP8.9□□□□□ -0.98
TP53-220ENST00000610623 UBE2E1P51965 193 aa8.9□□□□□ -0.98
TP53-220ENST00000610623 C3orf22Q8N5N4 141 aa8.9□□□□□ -0.98
TP53-220ENST00000610623 CITED2Q99967 270 aaPredicted RBP8.9□□□□□ -0.98
TP53-220ENST00000610623 SIRPDQ9H106 197 aa8.9□□□□□ -0.98
TP53-220ENST00000610623 FAM236AA0A1B0GUQ0 79 aa8.89□□□□□ -0.99
TP53-220ENST00000610623 FAM236BA0A1B0GV22 79 aa8.89□□□□□ -0.99
TP53-220ENST00000610623 UQCRQO14949 82 aa8.89□□□□□ -0.99
TP53-220ENST00000610623 ID1P41134 155 aa8.89□□□□□ -0.99
TP53-220ENST00000610623 SUMO4Q6EEV6 95 aa8.89□□□□□ -0.99
TP53-220ENST00000610623 CLEC19AQ6UXS0 136 aa8.89□□□□□ -0.99
TP53-220ENST00000610623 APRG1Q8IVJ8 170 aa8.89□□□□□ -0.99
TP53-220ENST00000610623 C19orf84I3L1E1 186 aa8.89□□□□□ -0.99
TP53-220ENST00000610623 GNRH2O43555 120 aa8.89□□□□□ -0.99
TP53-220ENST00000610623 NDUFA7O95182 113 aa8.89□□□□□ -0.99
TP53-220ENST00000610623 ZFP36P26651 326 aaKnown RBP8.89□□□□□ -0.99
TP53-220ENST00000610623 RHOHQ15669 191 aa8.89□□□□□ -0.99
TP53-220ENST00000610623 NSUN5P1Q3KNT7 163 aa8.89□□□□□ -0.99
TP53-220ENST00000610623 EEF1AKMT3Q96AZ1 226 aa8.89□□□□□ -0.99
TP53-220ENST00000610623 FAM19A4Q96LR4 140 aa8.89□□□□□ -0.99
TP53-220ENST00000610623 ADGRG4Q8IZF6 3080 aa8.89□□□□□ -0.99
TP53-220ENST00000610623 IGHV3-49A0A0A0MS15 119 aa8.88□□□□□ -0.99
TP53-220ENST00000610623 TRBV7-1A0A0A6YYK4 115 aa8.88□□□□□ -0.99
TP53-220ENST00000610623 LINC00694P0DN24 101 aa8.88□□□□□ -0.99
TP53-220ENST00000610623 C5orf47Q569G3 176 aa8.88□□□□□ -0.99
TP53-220ENST00000610623 C9orf153Q5TBE3 101 aa8.88□□□□□ -0.99
TP53-220ENST00000610623 C20orf173Q96LM9 149 aa8.88□□□□□ -0.99
TP53-220ENST00000610623 LITAFQ99732 161 aa8.88□□□□□ -0.99
TP53-220ENST00000610623 CSDC2Q9Y534 153 aaKnown RBP8.88□□□□□ -0.99
TP53-220ENST00000610623 ATRXP46100 2492 aa8.88□□□□□ -0.99
TP53-220ENST00000610623 RNASE4P34096 147 aaKnown RBP8.87□□□□□ -0.99
TP53-220ENST00000610623 LRRC75A-AS1Q8N1F1 130 aa8.87□□□□□ -0.99
TP53-220ENST00000610623 C3orf56Q8N813 242 aa8.87□□□□□ -0.99
TP53-220ENST00000610623 Q8N9W7 124 aa8.87□□□□□ -0.99
TP53-220ENST00000610623 LINC00526Q96FQ7 95 aa8.87□□□□□ -0.99
TP53-220ENST00000610623 ZNF256Q9Y2P7 627 aaPredicted RBP8.87□□□□□ -0.99
TP53-220ENST00000610623 ABCA4P78363 2273 aa8.87□□□□□ -0.99
TP53-220ENST00000610623 PRSS2P07478 247 aa8.87□□□□□ -0.99
TP53-220ENST00000610623 LMO4P61968 165 aa8.87□□□□□ -0.99
TP53-220ENST00000610623 WNK2Q9Y3S1 2297 aa8.86□□□□□ -0.99
TP53-220ENST00000610623 IGHV3-64A0A075B6Q5 118 aa8.86□□□□□ -0.99
TP53-220ENST00000610623 A0A1B0GX51 115 aa8.86□□□□□ -0.99
TP53-220ENST00000610623 F5H697 171 aa8.86□□□□□ -0.99
TP53-220ENST00000610623 IGHV3-30-3P0DP02 117 aa8.86□□□□□ -0.99
TP53-220ENST00000610623 LINC00643Q86TS7 51 aa8.86□□□□□ -0.99
TP53-220ENST00000610623 HIVEP3Q5T1R4 2406 aa8.86□□□□□ -0.99
TP53-220ENST00000610623 COL6A6A6NMZ7 2263 aa8.86□□□□□ -0.99
TP53-220ENST00000610623 NPFFO15130 113 aa8.86□□□□□ -0.99
TP53-220ENST00000610623 ECSCRQ19T08 205 aa8.86□□□□□ -0.99
TP53-220ENST00000610623 CLEC2BQ92478 149 aa8.86□□□□□ -0.99
TP53-220ENST00000610623 I3L3M4 83 aa8.85□□□□□ -0.99
TP53-220ENST00000610623 DEFB104AQ8WTQ1 72 aa8.85□□□□□ -0.99
TP53-220ENST00000610623 BPESC1Q9GZL8 116 aa8.85□□□□□ -0.99
TP53-220ENST00000610623 ARHGAP32A7KAX9 2087 aa8.85□□□□□ -0.99
TP53-220ENST00000610623 J3KT08 172 aa8.85□□□□□ -0.99
TP53-220ENST00000610623 MIAQ16674 131 aa8.85□□□□□ -0.99
TP53-220ENST00000610623 OPRPNQ99935 248 aaPredicted RBP8.85□□□□□ -0.99
TP53-220ENST00000610623 TIMM21Q9BVV7 248 aa8.85□□□□□ -0.99
TP53-220ENST00000610623 MUC4Q99102 2169 aa8.84□□□□□ -0.99
TP53-220ENST00000610623 HRNRQ86YZ3 2850 aaPredicted RBP8.84□□□□□ -0.99
TP53-220ENST00000610623 TPRP12270 2363 aaKnown RBP8.84□□□□□ -0.99
TP53-220ENST00000610623 A0A0J9YXV3 536 aa8.84□□□□□ -0.99
TP53-220ENST00000610623 ATP6V0E1O15342 81 aa8.84□□□□□ -0.99
TP53-220ENST00000610623 HERVK_113P63121 156 aa8.84□□□□□ -0.99
TP53-220ENST00000610623 TMEM61Q8N0U2 210 aa8.84□□□□□ -0.99
TP53-220ENST00000610623 C20orf203Q8NBC4 194 aa8.84□□□□□ -0.99
TP53-220ENST00000610623 SOCS3O14543 225 aa8.83□□□□□ -1
TP53-220ENST00000610623 CXCL5P42830 114 aa8.83□□□□□ -1
TP53-220ENST00000610623 RPS28P62857 69 aaKnown RBP8.83□□□□□ -1
TP53-220ENST00000610623 CEMP1Q6PRD7 247 aaPredicted RBP8.83□□□□□ -1
TP53-220ENST00000610623 SDIM1Q6ZPB5 146 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms