RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 TRAV8-3A0A0A6YYJ7 113 aa5.18□□□□□ -1.58
SYNPO2-206ENST00000610556 IGKV2-29A2NJV5 120 aaPredicted RBP5.18□□□□□ -1.58
SYNPO2-206ENST00000610556 CEMP1Q6PRD7 247 aaPredicted RBP5.18□□□□□ -1.58
SYNPO2-206ENST00000610556 LINC01356Q8N9X3 169 aa5.18□□□□□ -1.58
SYNPO2-206ENST00000610556 SPAG8Q99932 426 aaPredicted RBP5.18□□□□□ -1.58
SYNPO2-206ENST00000610556 DMXL2Q8TDJ6 3036 aa5.18□□□□□ -1.58
SYNPO2-206ENST00000610556 AKAP13Q12802 2813 aa5.18□□□□□ -1.58
SYNPO2-206ENST00000610556 TMEM262E9PQX1 116 aa5.18□□□□□ -1.58
SYNPO2-206ENST00000610556 EDN2P20800 178 aa5.18□□□□□ -1.58
SYNPO2-206ENST00000610556 CFHR3Q02985 330 aa5.18□□□□□ -1.58
SYNPO2-206ENST00000610556 C10orf105Q8TEF2 133 aa5.18□□□□□ -1.58
SYNPO2-206ENST00000610556 PPDPFLQ8WWR9 84 aa5.18□□□□□ -1.58
SYNPO2-206ENST00000610556 P0DMU3 169 aa5.17□□□□□ -1.58
SYNPO2-206ENST00000610556 FAM231AP0DMU4 169 aa5.17□□□□□ -1.58
SYNPO2-206ENST00000610556 FAM231CP0DMU5 169 aa5.17□□□□□ -1.58
SYNPO2-206ENST00000610556 SLURP1P55000 103 aa5.17□□□□□ -1.58
SYNPO2-206ENST00000610556 APRG1Q8IVJ8 170 aa5.17□□□□□ -1.58
SYNPO2-206ENST00000610556 NEXN-AS1Q8NBZ9 246 aa5.17□□□□□ -1.58
SYNPO2-206ENST00000610556 CNFNQ9BYD5 112 aa5.17□□□□□ -1.58
SYNPO2-206ENST00000610556 TRBV20-1A0A075B6N2 111 aa5.17□□□□□ -1.58
SYNPO2-206ENST00000610556 SLC25A20O43772 301 aa5.17□□□□□ -1.58
SYNPO2-206ENST00000610556 RNASE1P07998 156 aaKnown RBP5.17□□□□□ -1.58
SYNPO2-206ENST00000610556 GAGE2BQ13066 116 aa5.17□□□□□ -1.58
SYNPO2-206ENST00000610556 GAGE2EQ4V326 116 aa5.17□□□□□ -1.58
SYNPO2-206ENST00000610556 HIST2H2BDQ6DRA6 164 aa5.17□□□□□ -1.58
SYNPO2-206ENST00000610556 GAGE2DQ9UEU5 116 aa5.17□□□□□ -1.58
SYNPO2-206ENST00000610556 TRAV8-4A0A0B4J246 113 aa5.17□□□□□ -1.58
SYNPO2-206ENST00000610556 H3BUA1 57 aa5.17□□□□□ -1.58
SYNPO2-206ENST00000610556 MUSTN1Q8IVN3 82 aa5.17□□□□□ -1.58
SYNPO2-206ENST00000610556 ZNRF2Q8NHG8 242 aa5.17□□□□□ -1.58
SYNPO2-206ENST00000610556 NTN5Q8WTR8 489 aaPredicted RBP5.17□□□□□ -1.58
SYNPO2-206ENST00000610556 RNASE3P12724 160 aaKnown RBP5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 RPL35AP18077 110 aaKnown RBP5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 ATXN8Q156A1 80 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 TMEM101Q96IK0 257 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 JMJD1CQ15652 2540 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 IGHV4OR15-8A0A075B7B6 117 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 A0A087WW49 117 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 CFC1BP0CG36 223 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 CFC1P0CG37 223 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 ZFAND6Q6FIF0 208 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 UFSP1Q6NVU6 142 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 PRIMA1Q86XR5 153 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 DAND5Q8N907 189 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 C11orf68Q9H3H3 251 aaKnown RBP5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 PRRC2AP48634 2157 aaKnown RBP5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 A6NDX4 124 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 GAGE12JA6NER3 117 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 PRM2P04554 102 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 INSL3P51460 131 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 GAGE4Q13068 117 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 GAGE5Q13069 117 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 ATP6V0BQ99437 205 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 KALRNO60229 2985 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 TSPAN13O95857 204 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 RPL36AP83881 106 aaKnown RBP5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 C10orf126Q8N4M7 172 aa5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 RPL36ALQ969Q0 106 aaKnown RBP5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 SPANXB1Q9NS25 103 aaPredicted RBP5.16□□□□□ -1.58
SYNPO2-206ENST00000610556 TRGV4A0A0C4DH28 118 aa5.15□□□□□ -1.58
SYNPO2-206ENST00000610556 DNAL4O96015 105 aa5.15□□□□□ -1.58
SYNPO2-206ENST00000610556 INSP01308 110 aa5.15□□□□□ -1.58
SYNPO2-206ENST00000610556 CHCHD5Q9BSY4 110 aa5.15□□□□□ -1.58
SYNPO2-206ENST00000610556 C1QTNF4Q9BXJ3 329 aa5.15□□□□□ -1.58
SYNPO2-206ENST00000610556 ZNF462Q96JM2 2506 aa5.15□□□□□ -1.58
SYNPO2-206ENST00000610556 TRBV7-9A0A0J9YWB2 115 aa5.15□□□□□ -1.59
SYNPO2-206ENST00000610556 A0A0J9YX75 114 aa5.15□□□□□ -1.59
SYNPO2-206ENST00000610556 DSCR9P59020 149 aa5.15□□□□□ -1.59
SYNPO2-206ENST00000610556 RHOHQ15669 191 aa5.15□□□□□ -1.59
SYNPO2-206ENST00000610556 YAE1D1Q9NRH1 226 aa5.15□□□□□ -1.59
SYNPO2-206ENST00000610556 ACANP16112 2415 aa5.15□□□□□ -1.59
SYNPO2-206ENST00000610556 FOXI1Q12951 378 aa5.15□□□□□ -1.59
SYNPO2-206ENST00000610556 NDUFA11Q86Y39 141 aa5.15□□□□□ -1.59
SYNPO2-206ENST00000610556 PRB1P04280 392 aa5.14□□□□□ -1.59
SYNPO2-206ENST00000610556 PROK1P58294 105 aa5.14□□□□□ -1.59
SYNPO2-206ENST00000610556 LINC00158P58513 81 aa5.14□□□□□ -1.59
SYNPO2-206ENST00000610556 TIMM17AQ99595 171 aa5.14□□□□□ -1.59
SYNPO2-206ENST00000610556 TACC2O95359 2948 aa5.14□□□□□ -1.59
SYNPO2-206ENST00000610556 TCL1BO95988 128 aa5.14□□□□□ -1.59
SYNPO2-206ENST00000610556 GATA3P23771 443 aa5.14□□□□□ -1.59
SYNPO2-206ENST00000610556 COX8CQ7Z4L0 72 aa5.14□□□□□ -1.59
SYNPO2-206ENST00000610556 GPHB5Q86YW7 130 aa5.14□□□□□ -1.59
SYNPO2-206ENST00000610556 C20orf203Q8NBC4 194 aa5.14□□□□□ -1.59
SYNPO2-206ENST00000610556 U3KQE9 123 aa5.14□□□□□ -1.59
SYNPO2-206ENST00000610556 IGLV2-18A0A075B6J9 118 aa5.14□□□□□ -1.59
SYNPO2-206ENST00000610556 A0A0J9YY99 117 aa5.14□□□□□ -1.59
SYNPO2-206ENST00000610556 LINC01619G3V211 115 aa5.14□□□□□ -1.59
SYNPO2-206ENST00000610556 LEPROTO15243 131 aa5.14□□□□□ -1.59
SYNPO2-206ENST00000610556 MED14OSP0DP75 135 aa5.14□□□□□ -1.59
SYNPO2-206ENST00000610556 K7EMT4 169 aa5.13□□□□□ -1.59
SYNPO2-206ENST00000610556 ELANEP08246 267 aa5.13□□□□□ -1.59
SYNPO2-206ENST00000610556 NSUN5P1Q3KNT7 163 aa5.13□□□□□ -1.59
SYNPO2-206ENST00000610556 MORN3Q6PF18 240 aaPredicted RBP5.13□□□□□ -1.59
SYNPO2-206ENST00000610556 TEN1Q86WV5 123 aa5.13□□□□□ -1.59
SYNPO2-206ENST00000610556 ANKRD29Q8N6D5 301 aa5.13□□□□□ -1.59
SYNPO2-206ENST00000610556 VPREB3Q9UKI3 123 aa5.13□□□□□ -1.59
SYNPO2-206ENST00000610556 COPS9Q8WXC6 57 aa5.13□□□□□ -1.59
SYNPO2-206ENST00000610556 ZMAT4Q9H898 229 aa5.13□□□□□ -1.59
SYNPO2-206ENST00000610556 TRBV7-3A0A075B6L6 115 aa5.13□□□□□ -1.59
SYNPO2-206ENST00000610556 RHODO00212 210 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms