RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 DERL1Q9BUN8 251 aa11.47□□□□□ -0.57
PRKN-208ENST00000610470 IFNA1P01562 189 aa11.46□□□□□ -0.57
PRKN-208ENST00000610470 Q0VG73 95 aa11.46□□□□□ -0.57
PRKN-208ENST00000610470 CENPWQ5EE01 88 aa11.46□□□□□ -0.57
PRKN-208ENST00000610470 Q8N976 141 aa11.46□□□□□ -0.57
PRKN-208ENST00000610470 DAZAP1Q96EP5 407 aaKnown RBP11.46□□□□□ -0.57
PRKN-208ENST00000610470 AP1S3Q96PC3 154 aa11.46□□□□□ -0.57
PRKN-208ENST00000610470 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.45□□□□□ -0.58
PRKN-208ENST00000610470 RBFOX3A6NFN3 312 aa11.45□□□□□ -0.58
PRKN-208ENST00000610470 RPS20P60866 119 aaKnown RBP11.45□□□□□ -0.58
PRKN-208ENST00000610470 SSTP61278 116 aa11.45□□□□□ -0.58
PRKN-208ENST00000610470 PKIAP61925 76 aa11.45□□□□□ -0.58
PRKN-208ENST00000610470 BLOC1S1P78537 153 aa11.45□□□□□ -0.58
PRKN-208ENST00000610470 TMEM97Q5BJF2 176 aa11.45□□□□□ -0.58
PRKN-208ENST00000610470 FAM30AQ9NZY2 134 aa11.45□□□□□ -0.58
PRKN-208ENST00000610470 PDE6DO43924 150 aa11.44□□□□□ -0.58
PRKN-208ENST00000610470 BCL2P10415 239 aa11.44□□□□□ -0.58
PRKN-208ENST00000610470 MEF2BQ02080 365 aaPredicted RBP11.44□□□□□ -0.58
PRKN-208ENST00000610470 ATRAIDQ6UW56 229 aa11.44□□□□□ -0.58
PRKN-208ENST00000610470 SMIM12Q96EX1 92 aa11.44□□□□□ -0.58
PRKN-208ENST00000610470 DNAJC30Q96LL9 226 aa11.44□□□□□ -0.58
PRKN-208ENST00000610470 CRPP02741 224 aa11.43□□□□□ -0.58
PRKN-208ENST00000610470 GNG4P50150 75 aa11.43□□□□□ -0.58
PRKN-208ENST00000610470 FER1L6-AS1Q8NA97 138 aa11.43□□□□□ -0.58
PRKN-208ENST00000610470 OR2D3Q8NGH3 330 aa11.43□□□□□ -0.58
PRKN-208ENST00000610470 TPPP3Q9BW30 176 aa11.43□□□□□ -0.58
PRKN-208ENST00000610470 VAX2Q9UIW0 290 aa11.43□□□□□ -0.58
PRKN-208ENST00000610470 KIF25-AS1Q9Y6Z4 181 aa11.43□□□□□ -0.58
PRKN-208ENST00000610470 XKRY2A2RUG3 117 aa11.42□□□□□ -0.58
PRKN-208ENST00000610470 IGLV2-8P01709 118 aa11.42□□□□□ -0.58
PRKN-208ENST00000610470 CHCHD5Q9BSY4 110 aa11.42□□□□□ -0.58
PRKN-208ENST00000610470 C1orf43Q9BWL3 253 aa11.42□□□□□ -0.58
PRKN-208ENST00000610470 BIN3Q9NQY0 253 aa11.42□□□□□ -0.58
PRKN-208ENST00000610470 RAB19A4D1S5 217 aa11.41□□□□□ -0.58
PRKN-208ENST00000610470 C19orf71A6NCJ1 209 aa11.41□□□□□ -0.58
PRKN-208ENST00000610470 IGLC6P0CF74 106 aa11.41□□□□□ -0.58
PRKN-208ENST00000610470 GZMBP10144 247 aa11.41□□□□□ -0.58
PRKN-208ENST00000610470 CACNG7P62955 275 aa11.41□□□□□ -0.58
PRKN-208ENST00000610470 MPV17L2Q567V2 206 aa11.41□□□□□ -0.58
PRKN-208ENST00000610470 Q6ZSA8 131 aa11.41□□□□□ -0.58
PRKN-208ENST00000610470 C15orf54Q8N8G6 183 aa11.41□□□□□ -0.58
PRKN-208ENST00000610470 LYPD6BQ8NI32 183 aa11.41□□□□□ -0.58
PRKN-208ENST00000610470 MED9Q9NWA0 146 aa11.41□□□□□ -0.58
PRKN-208ENST00000610470 H7C1H1 209 aa11.4□□□□□ -0.58
PRKN-208ENST00000610470 P01737 135 aa11.4□□□□□ -0.58
PRKN-208ENST00000610470 ANGP03950 147 aaKnown RBP11.4□□□□□ -0.58
PRKN-208ENST00000610470 TAGLN2P37802 199 aaKnown RBP11.4□□□□□ -0.58
PRKN-208ENST00000610470 F2Z2F3 143 aa11.39□□□□□ -0.59
PRKN-208ENST00000610470 MGPP08493 103 aa11.39□□□□□ -0.59
PRKN-208ENST00000610470 HERC1Q15751 4861 aa11.39□□□□□ -0.59
PRKN-208ENST00000610470 C14orf177Q52M58 125 aa11.39□□□□□ -0.59
PRKN-208ENST00000610470 ENHOQ6UWT2 76 aa11.39□□□□□ -0.59
PRKN-208ENST00000610470 TRBV25-1A0A075B6N4 114 aa11.38□□□□□ -0.59
PRKN-208ENST00000610470 NTM-AS1Q6ZSK4 140 aa11.38□□□□□ -0.59
PRKN-208ENST00000610470 MYCBP2O75592 4640 aa11.37□□□□□ -0.59
PRKN-208ENST00000610470 SRRM2Q9UQ35 2752 aaKnown RBP11.37□□□□□ -0.59
PRKN-208ENST00000610470 M0QY20 66 aa11.37□□□□□ -0.59
PRKN-208ENST00000610470 TRGC1P0CF51 173 aa11.37□□□□□ -0.59
PRKN-208ENST00000610470 MIAQ16674 131 aa11.37□□□□□ -0.59
PRKN-208ENST00000610470 SUMO4Q6EEV6 95 aa11.37□□□□□ -0.59
PRKN-208ENST00000610470 TEX261Q6UWH6 196 aa11.37□□□□□ -0.59
PRKN-208ENST00000610470 TRBV20OR9-2A0A075B6H5 130 aa11.36□□□□□ -0.59
PRKN-208ENST00000610470 GAGE6Q13070 117 aa11.36□□□□□ -0.59
PRKN-208ENST00000610470 LINC01620Q4KN68 170 aa11.36□□□□□ -0.59
PRKN-208ENST00000610470 IGHV1-24A0A0C4DH33 117 aa11.35□□□□□ -0.59
PRKN-208ENST00000610470 PLA2G1BP04054 148 aaKnown RBP11.35□□□□□ -0.59
PRKN-208ENST00000610470 RBX1P62877 108 aa11.35□□□□□ -0.59
PRKN-208ENST00000610470 IQCJQ1A5X6 159 aa11.35□□□□□ -0.59
PRKN-208ENST00000610470 LYZL1Q6UWQ5 148 aa11.35□□□□□ -0.59
PRKN-208ENST00000610470 WDR73Q6P4I2 378 aa11.34□□□□□ -0.59
PRKN-208ENST00000610470 RASL11AQ6T310 242 aa11.34□□□□□ -0.59
PRKN-208ENST00000610470 LINC00528Q8N1L1 170 aa11.34□□□□□ -0.59
PRKN-208ENST00000610470 EIF5A2Q9GZV4 153 aaKnown RBP11.34□□□□□ -0.59
PRKN-208ENST00000610470 DPH3P1Q9H4G8 78 aa11.34□□□□□ -0.59
PRKN-208ENST00000610470 PRR34Q9NV39 138 aa11.34□□□□□ -0.59
PRKN-208ENST00000610470 DMBT1Q9UGM3 2413 aaPredicted RBP11.33□□□□□ -0.6
PRKN-208ENST00000610470 HLA-DQA1P01909 254 aa11.33□□□□□ -0.6
PRKN-208ENST00000610470 NTF3P20783 257 aa11.33□□□□□ -0.6
PRKN-208ENST00000610470 NUDT10Q8NFP7 164 aa11.33□□□□□ -0.6
PRKN-208ENST00000610470 NUDT11Q96G61 164 aa11.33□□□□□ -0.6
PRKN-208ENST00000610470 TMEM250H0YL14 139 aa11.32□□□□□ -0.6
PRKN-208ENST00000610470 CTRLP40313 264 aa11.32□□□□□ -0.6
PRKN-208ENST00000610470 CEBPGP53567 150 aa11.32□□□□□ -0.6
PRKN-208ENST00000610470 SCXQ7RTU7 201 aa11.32□□□□□ -0.6
PRKN-208ENST00000610470 LINC00269Q8N2A0 174 aa11.32□□□□□ -0.6
PRKN-208ENST00000610470 FAM210AQ96ND0 272 aa11.32□□□□□ -0.6
PRKN-208ENST00000610470 FLG2Q5D862 2391 aaPredicted RBP11.31□□□□□ -0.6
PRKN-208ENST00000610470 USP17L23D6RBM5 183 aa11.31□□□□□ -0.6
PRKN-208ENST00000610470 CLPSL2Q6UWE3 100 aa11.31□□□□□ -0.6
PRKN-208ENST00000610470 CHAC1Q9BUX1 264 aa11.31□□□□□ -0.6
PRKN-208ENST00000610470 RPP21Q9H633 154 aaKnown RBP11.31□□□□□ -0.6
PRKN-208ENST00000610470 NIT2Q9NQR4 276 aa11.31□□□□□ -0.6
PRKN-208ENST00000610470 TWIST1Q15672 202 aa11.3□□□□□ -0.6
PRKN-208ENST00000610470 OCC1Q8TAD7 63 aa11.3□□□□□ -0.6
PRKN-208ENST00000610470 PGLYRP4Q96LB8 373 aa11.3□□□□□ -0.6
PRKN-208ENST00000610470 TMEM243Q9BU79 118 aa11.3□□□□□ -0.6
PRKN-208ENST00000610470 CNFNQ9BYD5 112 aa11.3□□□□□ -0.6
PRKN-208ENST00000610470 REG3AQ06141 175 aa11.29□□□□□ -0.6
PRKN-208ENST00000610470 RNASE7Q9H1E1 156 aaKnown RBP11.29□□□□□ -0.6
PRKN-208ENST00000610470 A0A1B0GUV1 79 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms