RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 NIT1Q86X76 327 aa8.19□□□□□ -1.1
CTSA-210ENST00000606000 DAZAP1Q96EP5 407 aaKnown RBP8.19□□□□□ -1.1
CTSA-210ENST00000606000 PGPEP1Q9NXJ5 209 aa8.19□□□□□ -1.1
CTSA-210ENST00000606000 A0A087WWC5 75 aa8.18□□□□□ -1.1
CTSA-210ENST00000606000 C9JQL5 133 aa8.18□□□□□ -1.1
CTSA-210ENST00000606000 F5H697 171 aa8.18□□□□□ -1.1
CTSA-210ENST00000606000 P01737 135 aa8.18□□□□□ -1.1
CTSA-210ENST00000606000 MGPP08493 103 aa8.18□□□□□ -1.1
CTSA-210ENST00000606000 LAGE3Q14657 143 aa8.18□□□□□ -1.1
CTSA-210ENST00000606000 OR10G8Q8NGN5 311 aa8.18□□□□□ -1.1
CTSA-210ENST00000606000 SMIM12Q96EX1 92 aa8.18□□□□□ -1.1
CTSA-210ENST00000606000 AP1S3Q96PC3 154 aa8.18□□□□□ -1.1
CTSA-210ENST00000606000 RNASE7Q9H1E1 156 aaKnown RBP8.18□□□□□ -1.1
CTSA-210ENST00000606000 LECT2O14960 151 aa8.17□□□□□ -1.1
CTSA-210ENST00000606000 SRP19P09132 144 aaKnown RBP8.17□□□□□ -1.1
CTSA-210ENST00000606000 RPS20P60866 119 aaKnown RBP8.17□□□□□ -1.1
CTSA-210ENST00000606000 LCE2AQ5TA79 106 aaPredicted RBP8.17□□□□□ -1.1
CTSA-210ENST00000606000 CDPF1Q6NVV7 123 aa8.17□□□□□ -1.1
CTSA-210ENST00000606000 LYZL1Q6UWQ5 148 aa8.17□□□□□ -1.1
CTSA-210ENST00000606000 NUDT10Q8NFP7 164 aa8.17□□□□□ -1.1
CTSA-210ENST00000606000 NUDT11Q96G61 164 aa8.17□□□□□ -1.1
CTSA-210ENST00000606000 KLK12Q9UKR0 248 aa8.17□□□□□ -1.1
CTSA-210ENST00000606000 TMEM250H0YL14 139 aa8.16□□□□□ -1.1
CTSA-210ENST00000606000 SMIM17P0DL12 118 aa8.16□□□□□ -1.1
CTSA-210ENST00000606000 XGP55808 180 aa8.16□□□□□ -1.1
CTSA-210ENST00000606000 HAMPP81172 84 aa8.16□□□□□ -1.1
CTSA-210ENST00000606000 SUMO4Q6EEV6 95 aa8.16□□□□□ -1.1
CTSA-210ENST00000606000 Q8N814 137 aa8.16□□□□□ -1.1
CTSA-210ENST00000606000 OCC1Q8TAD7 63 aa8.16□□□□□ -1.1
CTSA-210ENST00000606000 IGLV5-52A0A0A0MRZ9 124 aa8.15□□□□□ -1.1
CTSA-210ENST00000606000 TRBV6-8A0A0A6YYG3 113 aa8.15□□□□□ -1.1
CTSA-210ENST00000606000 S100A1P23297 94 aa8.15□□□□□ -1.1
CTSA-210ENST00000606000 CLLU1Q5K131 121 aa8.15□□□□□ -1.1
CTSA-210ENST00000606000 NTM-AS1Q6ZSK4 140 aa8.15□□□□□ -1.1
CTSA-210ENST00000606000 Q8N1X5 172 aa8.15□□□□□ -1.1
CTSA-210ENST00000606000 SMIM7Q9BQ49 75 aa8.15□□□□□ -1.1
CTSA-210ENST00000606000 URGCP-MRPS24S4R325 110 aa8.15□□□□□ -1.1
CTSA-210ENST00000606000 M0QY20 66 aa8.14□□□□□ -1.11
CTSA-210ENST00000606000 GCSHP23434 173 aa8.14□□□□□ -1.11
CTSA-210ENST00000606000 CTRLP40313 264 aa8.14□□□□□ -1.11
CTSA-210ENST00000606000 CACNG7P62955 275 aa8.14□□□□□ -1.11
CTSA-210ENST00000606000 PEA15Q15121 130 aa8.14□□□□□ -1.11
CTSA-210ENST00000606000 MPV17L2Q567V2 206 aa8.14□□□□□ -1.11
CTSA-210ENST00000606000 DEFB104AQ8WTQ1 72 aa8.14□□□□□ -1.11
CTSA-210ENST00000606000 UBE2WQ96B02 151 aa8.14□□□□□ -1.11
CTSA-210ENST00000606000 RPP21Q9H633 154 aaKnown RBP8.14□□□□□ -1.11
CTSA-210ENST00000606000 A0A087WX48 190 aa8.13□□□□□ -1.11
CTSA-210ENST00000606000 TRAV8-3A0A0A6YYJ7 113 aa8.13□□□□□ -1.11
CTSA-210ENST00000606000 XKRY2A2RUG3 117 aa8.13□□□□□ -1.11
CTSA-210ENST00000606000 ZNF727A8MUV8 499 aa8.13□□□□□ -1.11
CTSA-210ENST00000606000 NTF3P20783 257 aa8.13□□□□□ -1.11
CTSA-210ENST00000606000 GTSF1Q8WW33 167 aa8.13□□□□□ -1.11
CTSA-210ENST00000606000 BAALCQ8WXS3 180 aa8.13□□□□□ -1.11
CTSA-210ENST00000606000 TM2D2Q9BX73 214 aa8.13□□□□□ -1.11
CTSA-210ENST00000606000 BIN3Q9NQY0 253 aa8.13□□□□□ -1.11
CTSA-210ENST00000606000 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.12□□□□□ -1.11
CTSA-210ENST00000606000 IGKV2D-24A0A075B6R9 120 aa8.12□□□□□ -1.11
CTSA-210ENST00000606000 TMEM262E9PQX1 116 aa8.12□□□□□ -1.11
CTSA-210ENST00000606000 F2Z2F3 143 aa8.12□□□□□ -1.11
CTSA-210ENST00000606000 C15orf54Q8N8G6 183 aa8.12□□□□□ -1.11
CTSA-210ENST00000606000 Q8N976 141 aa8.12□□□□□ -1.11
CTSA-210ENST00000606000 CHCHD5Q9BSY4 110 aa8.12□□□□□ -1.11
CTSA-210ENST00000606000 TRGC1P0CF51 173 aa8.11□□□□□ -1.11
CTSA-210ENST00000606000 GAGE6Q13070 117 aa8.11□□□□□ -1.11
CTSA-210ENST00000606000 TWIST1Q15672 202 aa8.11□□□□□ -1.11
CTSA-210ENST00000606000 CLPSL2Q6UWE3 100 aa8.11□□□□□ -1.11
CTSA-210ENST00000606000 ENHOQ6UWT2 76 aa8.11□□□□□ -1.11
CTSA-210ENST00000606000 CHCHD7Q9BUK0 85 aa8.11□□□□□ -1.11
CTSA-210ENST00000606000 DPH3P1Q9H4G8 78 aa8.11□□□□□ -1.11
CTSA-210ENST00000606000 TRAV26-2A0A0B4J265 109 aa8.1□□□□□ -1.11
CTSA-210ENST00000606000 FOXA3P55318 350 aaPredicted RBP8.1□□□□□ -1.11
CTSA-210ENST00000606000 LINC01620Q4KN68 170 aa8.1□□□□□ -1.11
CTSA-210ENST00000606000 KCNIP4Q6PIL6 250 aa8.1□□□□□ -1.11
CTSA-210ENST00000606000 ATRAIDQ6UW56 229 aa8.1□□□□□ -1.11
CTSA-210ENST00000606000 LINC01551Q86U37 167 aa8.1□□□□□ -1.11
CTSA-210ENST00000606000 NTN5Q8WTR8 489 aaPredicted RBP8.1□□□□□ -1.11
CTSA-210ENST00000606000 CNFNQ9BYD5 112 aa8.1□□□□□ -1.11
CTSA-210ENST00000606000 GATCO43716 136 aaKnown RBP8.09□□□□□ -1.11
CTSA-210ENST00000606000 NDUFS6O75380 124 aaKnown RBP8.09□□□□□ -1.11
CTSA-210ENST00000606000 ANGP03950 147 aaKnown RBP8.09□□□□□ -1.11
CTSA-210ENST00000606000 ADIRFQ15847 76 aa8.09□□□□□ -1.11
CTSA-210ENST00000606000 RASL11AQ6T310 242 aa8.09□□□□□ -1.11
CTSA-210ENST00000606000 COMMD7Q86VX2 200 aa8.09□□□□□ -1.11
CTSA-210ENST00000606000 FAM30AQ9NZY2 134 aa8.09□□□□□ -1.11
CTSA-210ENST00000606000 TRBV25-1A0A075B6N4 114 aa8.08□□□□□ -1.12
CTSA-210ENST00000606000 H7C1H1 209 aa8.08□□□□□ -1.12
CTSA-210ENST00000606000 SMR3BP02814 79 aaPredicted RBP8.08□□□□□ -1.12
CTSA-210ENST00000606000 RBX1P62877 108 aa8.08□□□□□ -1.12
CTSA-210ENST00000606000 ELOBQ15370 118 aa8.08□□□□□ -1.12
CTSA-210ENST00000606000 IQCJQ1A5X6 159 aa8.08□□□□□ -1.12
CTSA-210ENST00000606000 TMEM241Q24JQ0 296 aa8.08□□□□□ -1.12
CTSA-210ENST00000606000 FAM231DQ6ZW35 169 aa8.08□□□□□ -1.12
CTSA-210ENST00000606000 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.08□□□□□ -1.12
CTSA-210ENST00000606000 GATD1Q8NB37 220 aa8.08□□□□□ -1.12
CTSA-210ENST00000606000 RMI2Q96E14 147 aa8.08□□□□□ -1.12
CTSA-210ENST00000606000 PGLYRP4Q96LB8 373 aa8.08□□□□□ -1.12
CTSA-210ENST00000606000 SMDT1Q9H4I9 107 aa8.08□□□□□ -1.12
CTSA-210ENST00000606000 IGHV1-24A0A0C4DH33 117 aa8.07□□□□□ -1.12
CTSA-210ENST00000606000 CRPP02741 224 aa8.07□□□□□ -1.12
CTSA-210ENST00000606000 RPL23P62829 140 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms