RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 LYZL6O75951 148 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 OXTP01178 125 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 IGHV1-46P01743 117 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 CTSGP08311 255 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 BAALC-AS2P0C853 105 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 IGHV1-8P0DP01 117 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 KLRB1Q12918 225 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 Q1RN00 199 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 LYPD5Q6UWN5 251 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 Q6ZS52 159 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 DEFB119Q8N690 84 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 ZNRD1Q9P1U0 126 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 C22orf24Q9Y442 160 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 IGHV3-21A0A0B4J1V1 117 aa2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 IGHV1-58A0A0C4DH39 117 aa2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 PRAC2D3DTV9 90 aa2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 SPRY3O43610 288 aa2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 ENSAO43768 121 aaKnown RBP2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 IGHV3-30-3P0DP02 117 aa2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 CCL4P13236 92 aa2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 CCL3L1P16619 93 aa2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 TIRAPP58753 221 aa2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 S100A7L2Q5SY68 101 aa2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 HRCT1Q6UXD1 115 aa2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 TMEM86BQ8N661 226 aa2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 NUP37Q8NFH4 326 aa2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 Q8TAT8 98 aa2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 RPL39LQ96EH5 51 aaKnown RBP2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 C9orf85Q96MD7 179 aa2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 OVOL2Q9BRP0 275 aa2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 SPRR3Q9UBC9 169 aa2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 TP53TG1Q9Y2A0 90 aa2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 KIAA0100Q14667 2235 aaKnown RBP2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 MUC4Q99102 2169 aa2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 MED13Q9UHV7 2174 aa2.98□□□□□ -1.93
HMGB1P50-201ENST00000605814 FAM186AA6NE01 2351 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 TRAV41A0A0B4J266 112 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 TMEM178BH3BS89 294 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 H7C2G1 150 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 RS1O15537 224 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 LOXP28300 417 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 PFN2P35080 140 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 SYNJ2BPP57105 145 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 SEC61GP60059 68 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 NPC2P61916 151 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 DAZ2Q13117 558 aaKnown RBP2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 ADAMTSL4-AS1Q5T5F5 129 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 C10orf25Q5T742 122 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 ATP5EP2Q5VTU8 51 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 DAZ4Q86SG3 579 aaKnown RBP2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 RNF182Q8N6D2 247 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 ZFAND2AQ8N6M9 145 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 C20orf203Q8NBC4 194 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 DEFB108BQ8NET1 73 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 FAM110DQ8TAY7 271 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 ITLN2Q8WWU7 325 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 CLEC2BQ92478 149 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 VSIG2Q96IQ7 327 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 DEFB127Q9H1M4 99 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 DAZ1Q9NQZ3 744 aaKnown RBP2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 DAZ3Q9NR90 486 aaKnown RBP2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 BEX4Q9NWD9 120 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 UBE2D4Q9Y2X8 147 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 PHLDA3Q9Y5J5 127 aa2.97□□□□□ -1.93
HMGB1P50-201ENST00000605814 ZNF318Q5VUA4 2279 aa2.96□□□□□ -1.93
HMGB1P50-201ENST00000605814 TRAV8-3A0A0A6YYJ7 113 aa2.96□□□□□ -1.94
HMGB1P50-201ENST00000605814 USP17L23D6RBM5 183 aa2.96□□□□□ -1.94
HMGB1P50-201ENST00000605814 IGHG2P01859 326 aa2.96□□□□□ -1.94
HMGB1P50-201ENST00000605814 PRSS2P07478 247 aa2.96□□□□□ -1.94
HMGB1P50-201ENST00000605814 RNASE3P12724 160 aaKnown RBP2.96□□□□□ -1.94
HMGB1P50-201ENST00000605814 RPL28P46779 137 aaKnown RBP2.96□□□□□ -1.94
HMGB1P50-201ENST00000605814 CIRBPQ14011 172 aaKnown RBP2.96□□□□□ -1.94
HMGB1P50-201ENST00000605814 LINC00336Q6ZUF6 198 aa2.96□□□□□ -1.94
HMGB1P50-201ENST00000605814 C9orf139Q6ZV77 190 aa2.96□□□□□ -1.94
HMGB1P50-201ENST00000605814 LINC01561Q8N1V8 128 aa2.96□□□□□ -1.94
HMGB1P50-201ENST00000605814 LY6G5BQ8NDX9 201 aa2.96□□□□□ -1.94
HMGB1P50-201ENST00000605814 EEF1AKMT3Q96AZ1 226 aa2.96□□□□□ -1.94
HMGB1P50-201ENST00000605814 HES7Q9BYE0 225 aa2.96□□□□□ -1.94
HMGB1P50-201ENST00000605814 CYSTM1Q9H1C7 97 aa2.96□□□□□ -1.94
HMGB1P50-201ENST00000605814 C16orf95Q9H693 158 aa2.96□□□□□ -1.94
HMGB1P50-201ENST00000605814 LAMTOR3Q9UHA4 124 aa2.96□□□□□ -1.94
HMGB1P50-201ENST00000605814 NDUFA12Q9UI09 145 aa2.96□□□□□ -1.94
HMGB1P50-201ENST00000605814 URB1O60287 2271 aaKnown RBP2.96□□□□□ -1.94
HMGB1P50-201ENST00000605814 CADP27708 2225 aa2.96□□□□□ -1.94
HMGB1P50-201ENST00000605814 IGLV4-3A0A075B6K6 122 aa2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 IGLV5-45A0A087WSX0 123 aa2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 A0A0J9YXV3 536 aa2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 CLPSL1A2RUU4 121 aa2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 CYSRT1A8MQ03 144 aa2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 H0YGX0 51 aa2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 NDUFA1O15239 70 aa2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 NDUFC1O43677 76 aa2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 S100A4P26447 101 aaKnown RBP2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 ATP5EP56381 51 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 RPL39P62891 51 aaKnown RBP2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 KLKP1Q107X0 134 aa2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 PMS2CLQ68D20 193 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms