RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 RS1O15537 224 aa13.78□□□□□ -0.2
TUBB4B-202ENST00000604929 IGHV3-53P01767 116 aa13.78□□□□□ -0.2
TUBB4B-202ENST00000604929 OR4C5Q8NGB2 326 aa13.78□□□□□ -0.2
TUBB4B-202ENST00000604929 IFI27L1Q96BM0 104 aa13.78□□□□□ -0.2
TUBB4B-202ENST00000604929 CMYA5Q8N3K9 4069 aa13.78□□□□□ -0.2
TUBB4B-202ENST00000604929 VCYO14598 125 aa13.78□□□□□ -0.2
TUBB4B-202ENST00000604929 MAJINQ3KP22 176 aa13.78□□□□□ -0.2
TUBB4B-202ENST00000604929 ZNF479Q96JC4 524 aa13.78□□□□□ -0.2
TUBB4B-202ENST00000604929 KRTAP10-11P60412 298 aa13.77□□□□□ -0.21
TUBB4B-202ENST00000604929 TRBV6-5A0A0K0K1A5 114 aa13.76□□□□□ -0.21
TUBB4B-202ENST00000604929 DAZ2Q13117 558 aaKnown RBP13.76□□□□□ -0.21
TUBB4B-202ENST00000604929 ORMDL2Q53FV1 153 aa13.76□□□□□ -0.21
TUBB4B-202ENST00000604929 PET117Q6UWS5 81 aa13.76□□□□□ -0.21
TUBB4B-202ENST00000604929 VAMP8Q9BV40 100 aa13.76□□□□□ -0.21
TUBB4B-202ENST00000604929 GAGE12BA1L429 117 aa13.76□□□□□ -0.21
TUBB4B-202ENST00000604929 GAGE7O76087 117 aa13.76□□□□□ -0.21
TUBB4B-202ENST00000604929 GAGE12FP0CL80 117 aa13.76□□□□□ -0.21
TUBB4B-202ENST00000604929 GAGE12GP0CL81 117 aa13.76□□□□□ -0.21
TUBB4B-202ENST00000604929 GAGE12IP0CL82 117 aa13.76□□□□□ -0.21
TUBB4B-202ENST00000604929 DEFB135Q30KP9 77 aa13.76□□□□□ -0.21
TUBB4B-202ENST00000604929 H7C1H1 209 aa13.75□□□□□ -0.21
TUBB4B-202ENST00000604929 IGHV4-30-4P0DP06 118 aa13.75□□□□□ -0.21
TUBB4B-202ENST00000604929 PKIAP61925 76 aa13.75□□□□□ -0.21
TUBB4B-202ENST00000604929 LGALS9BQ3B8N2 356 aa13.75□□□□□ -0.21
TUBB4B-202ENST00000604929 KIR2DL4Q99706 377 aa13.75□□□□□ -0.21
TUBB4B-202ENST00000604929 TRBV27A0A0K0K1C4 114 aa13.74□□□□□ -0.21
TUBB4B-202ENST00000604929 RHODO00212 210 aa13.74□□□□□ -0.21
TUBB4B-202ENST00000604929 TRGV2A0A075B6R0 118 aa13.73□□□□□ -0.21
TUBB4B-202ENST00000604929 C20orf202A1L168 122 aa13.73□□□□□ -0.21
TUBB4B-202ENST00000604929 TSTD3H0UI37 97 aa13.73□□□□□ -0.21
TUBB4B-202ENST00000604929 PRSS1P07477 247 aa13.73□□□□□ -0.21
TUBB4B-202ENST00000604929 APOC4P55056 127 aa13.73□□□□□ -0.21
TUBB4B-202ENST00000604929 RPL32P62910 135 aaKnown RBP13.73□□□□□ -0.21
TUBB4B-202ENST00000604929 ZFP2Q6ZN57 461 aa13.73□□□□□ -0.21
TUBB4B-202ENST00000604929 TNFRSF18Q9Y5U5 241 aa13.73□□□□□ -0.21
TUBB4B-202ENST00000604929 X6R8D5 127 aa13.73□□□□□ -0.21
TUBB4B-202ENST00000604929 K7EMI3 77 aa13.73□□□□□ -0.21
TUBB4B-202ENST00000604929 C2orf66Q6UXQ4 117 aa13.73□□□□□ -0.21
TUBB4B-202ENST00000604929 OVOL2Q9BRP0 275 aa13.73□□□□□ -0.21
TUBB4B-202ENST00000604929 KIR2DL5BA0A0G2JN68 375 aa13.72□□□□□ -0.21
TUBB4B-202ENST00000604929 KIR2DL5BA0A0G2JPC4 375 aa13.72□□□□□ -0.21
TUBB4B-202ENST00000604929 LINC01545Q5VT33 79 aa13.72□□□□□ -0.21
TUBB4B-202ENST00000604929 KIR2DL5AQ8N109 375 aa13.72□□□□□ -0.21
TUBB4B-202ENST00000604929 KIR2DL5BQ8NHK3 375 aa13.72□□□□□ -0.21
TUBB4B-202ENST00000604929 NDUFAF3Q9BU61 184 aa13.72□□□□□ -0.21
TUBB4B-202ENST00000604929 I3L3M4 83 aa13.71□□□□□ -0.22
TUBB4B-202ENST00000604929 SPATA45Q537H7 98 aa13.71□□□□□ -0.22
TUBB4B-202ENST00000604929 NEXN-AS1Q8NBZ9 246 aa13.71□□□□□ -0.22
TUBB4B-202ENST00000604929 TOMM6Q96B49 74 aa13.71□□□□□ -0.22
TUBB4B-202ENST00000604929 SCGB3A1Q96QR1 104 aa13.71□□□□□ -0.22
TUBB4B-202ENST00000604929 EDA2RQ9HAV5 297 aa13.71□□□□□ -0.22
TUBB4B-202ENST00000604929 ANK2Q01484 3957 aa13.7□□□□□ -0.22
TUBB4B-202ENST00000604929 TRAV4A0A0B4J268 109 aa13.7□□□□□ -0.22
TUBB4B-202ENST00000604929 G3V4G9 280 aa13.7□□□□□ -0.22
TUBB4B-202ENST00000604929 DEFB4AO15263 64 aa13.7□□□□□ -0.22
TUBB4B-202ENST00000604929 LINC00587B1AMM8 73 aa13.69□□□□□ -0.22
TUBB4B-202ENST00000604929 DEFB130BP0DP73 79 aa13.69□□□□□ -0.22
TUBB4B-202ENST00000604929 DEFB130AP0DP74 79 aa13.69□□□□□ -0.22
TUBB4B-202ENST00000604929 RPL39P62891 51 aaKnown RBP13.69□□□□□ -0.22
TUBB4B-202ENST00000604929 OR11H2Q8NH07 326 aa13.69□□□□□ -0.22
TUBB4B-202ENST00000604929 DKK2Q9UBU2 259 aa13.69□□□□□ -0.22
TUBB4B-202ENST00000604929 TRAV9-2A0A087WT02 112 aa13.69□□□□□ -0.22
TUBB4B-202ENST00000604929 hDV102S1A0JD36 115 aa13.69□□□□□ -0.22
TUBB4B-202ENST00000604929 ATP5LO75964 103 aa13.69□□□□□ -0.22
TUBB4B-202ENST00000604929 RIPPLY3P57055 190 aa13.69□□□□□ -0.22
TUBB4B-202ENST00000604929 IGHV3-38A0A0C4DH36 116 aa13.68□□□□□ -0.22
TUBB4B-202ENST00000604929 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.68□□□□□ -0.22
TUBB4B-202ENST00000604929 TSHBP01222 138 aa13.68□□□□□ -0.22
TUBB4B-202ENST00000604929 TP53TG1Q9Y2A0 90 aa13.68□□□□□ -0.22
TUBB4B-202ENST00000604929 PHLDA1Q8WV24 401 aaPredicted RBP13.68□□□□□ -0.22
TUBB4B-202ENST00000604929 SMIM9A6NGZ8 99 aa13.67□□□□□ -0.22
TUBB4B-202ENST00000604929 EGFEM1PQ0D2K5 195 aa13.67□□□□□ -0.22
TUBB4B-202ENST00000604929 LGALS9CQ6DKI2 356 aa13.67□□□□□ -0.22
TUBB4B-202ENST00000604929 SLC25A29Q8N8R3 303 aa13.67□□□□□ -0.22
TUBB4B-202ENST00000604929 CYSLTR1Q9Y271 337 aa13.67□□□□□ -0.22
TUBB4B-202ENST00000604929 ZNRF2Q8NHG8 242 aa13.66□□□□□ -0.22
TUBB4B-202ENST00000604929 DDTP30046 118 aa13.66□□□□□ -0.22
TUBB4B-202ENST00000604929 Q6ZN92 141 aa13.66□□□□□ -0.22
TUBB4B-202ENST00000604929 ODF1Q14990 250 aa13.64□□□□□ -0.23
TUBB4B-202ENST00000604929 ERASQ7Z444 233 aa13.64□□□□□ -0.23
TUBB4B-202ENST00000604929 NOTCH1P46531 2555 aa13.64□□□□□ -0.23
TUBB4B-202ENST00000604929 TRGV4A0A0C4DH28 118 aa13.64□□□□□ -0.23
TUBB4B-202ENST00000604929 K7EQD1 137 aa13.64□□□□□ -0.23
TUBB4B-202ENST00000604929 C14orf144Q96I85 54 aa13.64□□□□□ -0.23
TUBB4B-202ENST00000604929 DNAJC30Q96LL9 226 aa13.64□□□□□ -0.23
TUBB4B-202ENST00000604929 G0S2P27469 103 aa13.63□□□□□ -0.23
TUBB4B-202ENST00000604929 TCTAP57738 103 aa13.63□□□□□ -0.23
TUBB4B-202ENST00000604929 MDFIQ99750 246 aa13.63□□□□□ -0.23
TUBB4B-202ENST00000604929 IGHV4-28A0A0C4DH34 117 aa13.63□□□□□ -0.23
TUBB4B-202ENST00000604929 FAM222AQ5U5X8 452 aa13.63□□□□□ -0.23
TUBB4B-202ENST00000604929 TRBV7-3A0A075B6L6 115 aa13.62□□□□□ -0.23
TUBB4B-202ENST00000604929 HSBP1L1C9JCN9 74 aa13.62□□□□□ -0.23
TUBB4B-202ENST00000604929 RHOHQ15669 191 aa13.62□□□□□ -0.23
TUBB4B-202ENST00000604929 STPG4Q8N801 248 aa13.62□□□□□ -0.23
TUBB4B-202ENST00000604929 RNF183Q96D59 192 aa13.62□□□□□ -0.23
TUBB4B-202ENST00000604929 ZMAT5Q9UDW3 170 aaKnown RBP13.62□□□□□ -0.23
TUBB4B-202ENST00000604929 GAGE12JA6NER3 117 aa13.61□□□□□ -0.23
TUBB4B-202ENST00000604929 IGIPA6NJ69 53 aa13.61□□□□□ -0.23
TUBB4B-202ENST00000604929 GAGE1Q13065 139 aa13.61□□□□□ -0.23
TUBB4B-202ENST00000604929 GAGE4Q13068 117 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms