RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 GZMBP10144 247 aa12.01□□□□□ -0.49
CCDC12-208ENST00000603885 TAGLN2P37802 199 aaKnown RBP12.01□□□□□ -0.49
CCDC12-208ENST00000603885 WFDC2Q14508 124 aa12.01□□□□□ -0.49
CCDC12-208ENST00000603885 AKAP14Q86UN6 197 aa12.01□□□□□ -0.49
CCDC12-208ENST00000603885 BIN3Q9NQY0 253 aa12.01□□□□□ -0.49
CCDC12-208ENST00000603885 XKRY2A2RUG3 117 aa12□□□□□ -0.49
CCDC12-208ENST00000603885 RBFOX3A6NFN3 312 aa12□□□□□ -0.49
CCDC12-208ENST00000603885 P01737 135 aa12□□□□□ -0.49
CCDC12-208ENST00000603885 TMEM70Q9BUB7 260 aa12□□□□□ -0.49
CCDC12-208ENST00000603885 KIF25-AS1Q9Y6Z4 181 aa12□□□□□ -0.49
CCDC12-208ENST00000603885 TRBV20OR9-2A0A075B6H5 130 aa11.99□□□□□ -0.49
CCDC12-208ENST00000603885 IGKV2D-24A0A075B6R9 120 aa11.99□□□□□ -0.49
CCDC12-208ENST00000603885 TMEM262E9PQX1 116 aa11.99□□□□□ -0.49
CCDC12-208ENST00000603885 LECT2O14960 151 aa11.99□□□□□ -0.49
CCDC12-208ENST00000603885 CACNG7P62955 275 aa11.99□□□□□ -0.49
CCDC12-208ENST00000603885 UBE2WQ96B02 151 aa11.99□□□□□ -0.49
CCDC12-208ENST00000603885 FAT1Q14517 4588 aa11.98□□□□□ -0.49
CCDC12-208ENST00000603885 TMEM97Q5BJF2 176 aa11.98□□□□□ -0.49
CCDC12-208ENST00000603885 C9orf62Q8N4C0 152 aa11.98□□□□□ -0.49
CCDC12-208ENST00000603885 BAALCQ8WXS3 180 aa11.98□□□□□ -0.49
CCDC12-208ENST00000603885 FRZBQ92765 325 aa11.98□□□□□ -0.49
CCDC12-208ENST00000603885 DNAJC30Q96LL9 226 aa11.98□□□□□ -0.49
CCDC12-208ENST00000603885 F2Z2F3 143 aa11.97□□□□□ -0.49
CCDC12-208ENST00000603885 MGPP08493 103 aa11.97□□□□□ -0.49
CCDC12-208ENST00000603885 PKIAP61925 76 aa11.97□□□□□ -0.49
CCDC12-208ENST00000603885 Q0VG73 95 aa11.97□□□□□ -0.49
CCDC12-208ENST00000603885 CHCHD5Q9BSY4 110 aa11.97□□□□□ -0.49
CCDC12-208ENST00000603885 hCG_2014768A0A024R1R8 64 aa11.96□□□□□ -0.49
CCDC12-208ENST00000603885 H7C1H1 209 aa11.96□□□□□ -0.49
CCDC12-208ENST00000603885 Q5VSD8 79 aa11.96□□□□□ -0.49
CCDC12-208ENST00000603885 VPS13BQ7Z7G8 4022 aa11.96□□□□□ -0.5
CCDC12-208ENST00000603885 DNAH8Q96JB1 4490 aa11.95□□□□□ -0.5
CCDC12-208ENST00000603885 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.95□□□□□ -0.5
CCDC12-208ENST00000603885 CRPP02741 224 aa11.95□□□□□ -0.5
CCDC12-208ENST00000603885 HAMPP81172 84 aa11.95□□□□□ -0.5
CCDC12-208ENST00000603885 MPV17L2Q567V2 206 aa11.95□□□□□ -0.5
CCDC12-208ENST00000603885 ATRAIDQ6UW56 229 aa11.95□□□□□ -0.5
CCDC12-208ENST00000603885 C15orf54Q8N8G6 183 aa11.95□□□□□ -0.5
CCDC12-208ENST00000603885 M0QY20 66 aa11.94□□□□□ -0.5
CCDC12-208ENST00000603885 TRGC1P0CF51 173 aa11.94□□□□□ -0.5
CCDC12-208ENST00000603885 LYZL1Q6UWQ5 148 aa11.94□□□□□ -0.5
CCDC12-208ENST00000603885 Q8N976 141 aa11.94□□□□□ -0.5
CCDC12-208ENST00000603885 SMR3BP02814 79 aaPredicted RBP11.93□□□□□ -0.5
CCDC12-208ENST00000603885 ANGP03950 147 aaKnown RBP11.93□□□□□ -0.5
CCDC12-208ENST00000603885 BLOC1S1P78537 153 aa11.93□□□□□ -0.5
CCDC12-208ENST00000603885 SUMO4Q6EEV6 95 aa11.93□□□□□ -0.5
CCDC12-208ENST00000603885 ALKAL2Q6UX46 152 aa11.93□□□□□ -0.5
CCDC12-208ENST00000603885 NTM-AS1Q6ZSK4 140 aa11.93□□□□□ -0.5
CCDC12-208ENST00000603885 NUDT10Q8NFP7 164 aa11.93□□□□□ -0.5
CCDC12-208ENST00000603885 NUDT11Q96G61 164 aa11.93□□□□□ -0.5
CCDC12-208ENST00000603885 C1orf43Q9BWL3 253 aa11.93□□□□□ -0.5
CCDC12-208ENST00000603885 TRBV25-1A0A075B6N4 114 aa11.92□□□□□ -0.5
CCDC12-208ENST00000603885 ENHOQ6UWT2 76 aa11.92□□□□□ -0.5
CCDC12-208ENST00000603885 DPH3P1Q9H4G8 78 aa11.92□□□□□ -0.5
CCDC12-208ENST00000603885 FAM30AQ9NZY2 134 aa11.92□□□□□ -0.5
CCDC12-208ENST00000603885 NTF3P20783 257 aa11.91□□□□□ -0.5
CCDC12-208ENST00000603885 CTRLP40313 264 aa11.91□□□□□ -0.5
CCDC12-208ENST00000603885 WDR73Q6P4I2 378 aa11.91□□□□□ -0.5
CCDC12-208ENST00000603885 OCC1Q8TAD7 63 aa11.91□□□□□ -0.5
CCDC12-208ENST00000603885 RPP21Q9H633 154 aaKnown RBP11.91□□□□□ -0.5
CCDC12-208ENST00000603885 IGHV1-24A0A0C4DH33 117 aa11.9□□□□□ -0.5
CCDC12-208ENST00000603885 TMEM250H0YL14 139 aa11.9□□□□□ -0.5
CCDC12-208ENST00000603885 FAM229AH3BQW9 127 aa11.9□□□□□ -0.5
CCDC12-208ENST00000603885 K7EN84 100 aa11.9□□□□□ -0.5
CCDC12-208ENST00000603885 INAFM2P0DMQ5 153 aa11.9□□□□□ -0.5
CCDC12-208ENST00000603885 IQCJQ1A5X6 159 aa11.9□□□□□ -0.5
CCDC12-208ENST00000603885 RASL11AQ6T310 242 aa11.9□□□□□ -0.5
CCDC12-208ENST00000603885 RNASE7Q9H1E1 156 aaKnown RBP11.9□□□□□ -0.5
CCDC12-208ENST00000603885 NKX2-5P52952 324 aaPredicted RBP11.89□□□□□ -0.51
CCDC12-208ENST00000603885 GAGE6Q13070 117 aa11.89□□□□□ -0.51
CCDC12-208ENST00000603885 MIAQ16674 131 aa11.89□□□□□ -0.51
CCDC12-208ENST00000603885 CNFNQ9BYD5 112 aa11.89□□□□□ -0.51
CCDC12-208ENST00000603885 SRRM2Q9UQ35 2752 aaKnown RBP11.88□□□□□ -0.51
CCDC12-208ENST00000603885 RBX1P62877 108 aa11.88□□□□□ -0.51
CCDC12-208ENST00000603885 TWIST1Q15672 202 aa11.88□□□□□ -0.51
CCDC12-208ENST00000603885 C14orf177Q52M58 125 aa11.88□□□□□ -0.51
CCDC12-208ENST00000603885 Q6ZSA8 131 aa11.88□□□□□ -0.51
CCDC12-208ENST00000603885 LYPD6BQ8NI32 183 aa11.88□□□□□ -0.51
CCDC12-208ENST00000603885 NIT2Q9NQR4 276 aa11.88□□□□□ -0.51
CCDC12-208ENST00000603885 LINC01620Q4KN68 170 aa11.86□□□□□ -0.51
CCDC12-208ENST00000603885 PRR34Q9NV39 138 aa11.86□□□□□ -0.51
CCDC12-208ENST00000603885 HLA-DQA1P01909 254 aa11.85□□□□□ -0.51
CCDC12-208ENST00000603885 CEBPGP53567 150 aa11.85□□□□□ -0.51
CCDC12-208ENST00000603885 CLPSL2Q6UWE3 100 aa11.85□□□□□ -0.51
CCDC12-208ENST00000603885 LINC00269Q8N2A0 174 aa11.85□□□□□ -0.51
CCDC12-208ENST00000603885 PGLYRP4Q96LB8 373 aa11.85□□□□□ -0.51
CCDC12-208ENST00000603885 TMEM243Q9BU79 118 aa11.85□□□□□ -0.51
CCDC12-208ENST00000603885 GATCO43716 136 aaKnown RBP11.84□□□□□ -0.51
CCDC12-208ENST00000603885 SMIM15Q7Z3B0 74 aa11.84□□□□□ -0.51
CCDC12-208ENST00000603885 GTSF1Q8WW33 167 aa11.84□□□□□ -0.51
CCDC12-208ENST00000603885 USP17L23D6RBM5 183 aa11.83□□□□□ -0.52
CCDC12-208ENST00000603885 FAM231DQ6ZW35 169 aa11.83□□□□□ -0.52
CCDC12-208ENST00000603885 EIF5A2Q9GZV4 153 aaKnown RBP11.83□□□□□ -0.52
CCDC12-208ENST00000603885 A8MWL6 223 aa11.82□□□□□ -0.52
CCDC12-208ENST00000603885 REG3AQ06141 175 aa11.82□□□□□ -0.52
CCDC12-208ENST00000603885 COTL1Q14019 142 aa11.82□□□□□ -0.52
CCDC12-208ENST00000603885 TRAV26-2A0A0B4J265 109 aa11.81□□□□□ -0.52
CCDC12-208ENST00000603885 A0A1B0GUV1 79 aa11.81□□□□□ -0.52
CCDC12-208ENST00000603885 UBE2L6O14933 153 aa11.81□□□□□ -0.52
CCDC12-208ENST00000603885 GATD1Q8NB37 220 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms