RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 MRPL18Q9H0U6 180 aaKnown RBP14.27□□□□□ -0.12
PNKP-215ENST00000600910 TRAPPC1Q9Y5R8 145 aa14.27□□□□□ -0.12
PNKP-215ENST00000600910 D6R8Y8 96 aa14.26□□□□□ -0.13
PNKP-215ENST00000600910 GAGE12JA6NER3 117 aa14.26□□□□□ -0.13
PNKP-215ENST00000600910 RPS10P46783 165 aaKnown RBP14.26□□□□□ -0.13
PNKP-215ENST00000600910 GAGE1Q13065 139 aa14.26□□□□□ -0.13
PNKP-215ENST00000600910 GAGE4Q13068 117 aa14.26□□□□□ -0.13
PNKP-215ENST00000600910 GAGE5Q13069 117 aa14.26□□□□□ -0.13
PNKP-215ENST00000600910 KIAA1644Q3SXP7 199 aa14.26□□□□□ -0.13
PNKP-215ENST00000600910 GAGE13Q4V321 117 aa14.26□□□□□ -0.13
PNKP-215ENST00000600910 NIT2Q9NQR4 276 aa14.26□□□□□ -0.13
PNKP-215ENST00000600910 KLK5Q9Y337 293 aaPredicted RBP14.26□□□□□ -0.13
PNKP-215ENST00000600910 STARD9Q9P2P6 4700 aa14.25□□□□□ -0.13
PNKP-215ENST00000600910 NUDT3O95989 172 aa14.25□□□□□ -0.13
PNKP-215ENST00000600910 ORMDL3Q8N138 153 aa14.25□□□□□ -0.13
PNKP-215ENST00000600910 ZNRF2Q8NHG8 242 aa14.25□□□□□ -0.13
PNKP-215ENST00000600910 ICOSQ9Y6W8 199 aa14.25□□□□□ -0.13
PNKP-215ENST00000600910 DYNC2H1Q8NCM8 4307 aaKnown RBP14.24□□□□□ -0.13
PNKP-215ENST00000600910 TRBV7-3A0A075B6L6 115 aa14.24□□□□□ -0.13
PNKP-215ENST00000600910 PPBPP02775 128 aa14.24□□□□□ -0.13
PNKP-215ENST00000600910 RAB5AP20339 215 aa14.24□□□□□ -0.13
PNKP-215ENST00000600910 RPL36AP83881 106 aaKnown RBP14.24□□□□□ -0.13
PNKP-215ENST00000600910 FABP9Q0Z7S8 132 aa14.24□□□□□ -0.13
PNKP-215ENST00000600910 OR10J3Q5JRS4 329 aa14.24□□□□□ -0.13
PNKP-215ENST00000600910 RPL36ALQ969Q0 106 aaKnown RBP14.24□□□□□ -0.13
PNKP-215ENST00000600910 A0A096LPF7 62 aa14.23□□□□□ -0.13
PNKP-215ENST00000600910 MRPL23Q16540 153 aaKnown RBP14.23□□□□□ -0.13
PNKP-215ENST00000600910 NRACQ8N912 160 aa14.23□□□□□ -0.13
PNKP-215ENST00000600910 C15orf53Q8NAA6 179 aa14.23□□□□□ -0.13
PNKP-215ENST00000600910 DNAJC30Q96LL9 226 aa14.23□□□□□ -0.13
PNKP-215ENST00000600910 TNFRSF18Q9Y5U5 241 aa14.23□□□□□ -0.13
PNKP-215ENST00000600910 LINC00694P0DN24 101 aa14.22□□□□□ -0.13
PNKP-215ENST00000600910 SRIP30626 198 aa14.22□□□□□ -0.13
PNKP-215ENST00000600910 PRELID3AQ96N28 172 aa14.22□□□□□ -0.13
PNKP-215ENST00000600910 TNFRSF6BO95407 300 aa14.21□□□□□ -0.13
PNKP-215ENST00000600910 PPP1R17O96001 155 aa14.21□□□□□ -0.13
PNKP-215ENST00000600910 NPYP01303 97 aa14.21□□□□□ -0.13
PNKP-215ENST00000600910 UBE2D3P61077 147 aa14.2□□□□□ -0.14
PNKP-215ENST00000600910 UBE2D2P62837 147 aa14.2□□□□□ -0.14
PNKP-215ENST00000600910 TRBV6-5A0A0K0K1A5 114 aa14.19□□□□□ -0.14
PNKP-215ENST00000600910 C3orf84H3BNL1 204 aa14.19□□□□□ -0.14
PNKP-215ENST00000600910 ST20Q9HBF5 79 aa14.19□□□□□ -0.14
PNKP-215ENST00000600910 APLNQ9ULZ1 77 aa14.19□□□□□ -0.14
PNKP-215ENST00000600910 TRGC2P03986 189 aa14.19□□□□□ -0.14
PNKP-215ENST00000600910 CASC10Q5T4H9 136 aa14.19□□□□□ -0.14
PNKP-215ENST00000600910 NEGR1Q7Z3B1 354 aa14.19□□□□□ -0.14
PNKP-215ENST00000600910 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.19□□□□□ -0.14
PNKP-215ENST00000600910 SDHAF1A6NFY7 115 aa14.18□□□□□ -0.14
PNKP-215ENST00000600910 ATP6V0E2Q8NHE4 81 aa14.18□□□□□ -0.14
PNKP-215ENST00000600910 ALKBH7Q9BT30 221 aaPredicted RBP14.18□□□□□ -0.14
PNKP-215ENST00000600910 LAMTOR2Q9Y2Q5 125 aa14.18□□□□□ -0.14
PNKP-215ENST00000600910 IGHV3-38A0A0C4DH36 116 aa14.17□□□□□ -0.14
PNKP-215ENST00000600910 PHOX2AO14813 284 aa14.17□□□□□ -0.14
PNKP-215ENST00000600910 TCTAP57738 103 aa14.17□□□□□ -0.14
PNKP-215ENST00000600910 SUMO2P61956 95 aaKnown RBP14.17□□□□□ -0.14
PNKP-215ENST00000600910 SH2D6Q7Z4S9 175 aa14.17□□□□□ -0.14
PNKP-215ENST00000600910 PLECQ15149 4684 aaKnown RBP14.17□□□□□ -0.14
PNKP-215ENST00000600910 C20orf78Q9BR46 151 aa14.16□□□□□ -0.14
PNKP-215ENST00000600910 TMEM70Q9BUB7 260 aa14.16□□□□□ -0.14
PNKP-215ENST00000600910 DAZ4Q86SG3 579 aaKnown RBP14.15□□□□□ -0.14
PNKP-215ENST00000600910 DAZ3Q9NR90 486 aaKnown RBP14.15□□□□□ -0.14
PNKP-215ENST00000600910 POLR2KP53803 58 aaKnown RBP14.15□□□□□ -0.14
PNKP-215ENST00000600910 TENM2Q9NT68 2774 aa14.14□□□□□ -0.15
PNKP-215ENST00000600910 DEFB104AQ8WTQ1 72 aa14.14□□□□□ -0.15
PNKP-215ENST00000600910 GTSF1LQ9H1H1 148 aa14.14□□□□□ -0.15
PNKP-215ENST00000600910 LOC389332A0A1B0GUA5 103 aa14.13□□□□□ -0.15
PNKP-215ENST00000600910 LYPD5Q6UWN5 251 aa14.13□□□□□ -0.15
PNKP-215ENST00000600910 MAP1LC3AQ9H492 121 aa14.13□□□□□ -0.15
PNKP-215ENST00000600910 TRBV27A0A0K0K1C4 114 aa14.12□□□□□ -0.15
PNKP-215ENST00000600910 ESRGQ1W209 222 aa14.12□□□□□ -0.15
PNKP-215ENST00000600910 SMIM2Q9BVW6 85 aa14.12□□□□□ -0.15
PNKP-215ENST00000600910 PRSS47A8MTI9 375 aa14.12□□□□□ -0.15
PNKP-215ENST00000600910 I3L3M4 83 aa14.12□□□□□ -0.15
PNKP-215ENST00000600910 VCYO14598 125 aa14.12□□□□□ -0.15
PNKP-215ENST00000600910 PMCHP20382 165 aa14.12□□□□□ -0.15
PNKP-215ENST00000600910 RPL32P62910 135 aaKnown RBP14.11□□□□□ -0.15
PNKP-215ENST00000600910 LYSTQ99698 3801 aa14.09□□□□□ -0.15
PNKP-215ENST00000600910 COTL1Q14019 142 aa14.09□□□□□ -0.15
PNKP-215ENST00000600910 IQCJQ1A5X6 159 aa14.09□□□□□ -0.15
PNKP-215ENST00000600910 NTM-AS1Q6ZSK4 140 aa14.09□□□□□ -0.15
PNKP-215ENST00000600910 C18orf32Q8TCD1 76 aa14.09□□□□□ -0.15
PNKP-215ENST00000600910 IGLV2-18A0A075B6J9 118 aa14.08□□□□□ -0.15
PNKP-215ENST00000600910 CCL18P55774 89 aa14.08□□□□□ -0.15
PNKP-215ENST00000600910 TIRAPP58753 221 aa14.08□□□□□ -0.15
PNKP-215ENST00000600910 KIR2DL4Q99706 377 aa14.08□□□□□ -0.15
PNKP-215ENST00000600910 TSHBP01222 138 aa14.08□□□□□ -0.16
PNKP-215ENST00000600910 IFI27P40305 119 aaPredicted RBP14.08□□□□□ -0.16
PNKP-215ENST00000600910 LINC00588Q9Y4M8 146 aa14.08□□□□□ -0.16
PNKP-215ENST00000600910 TRBV6-8A0A0A6YYG3 113 aa14.07□□□□□ -0.16
PNKP-215ENST00000600910 TMEM97Q5BJF2 176 aa14.07□□□□□ -0.16
PNKP-215ENST00000600910 Q8N8P6 123 aa14.07□□□□□ -0.16
PNKP-215ENST00000600910 TCAPO15273 167 aa14.06□□□□□ -0.16
PNKP-215ENST00000600910 FCER1GP30273 86 aa14.06□□□□□ -0.16
PNKP-215ENST00000600910 LELP1Q5T871 98 aa14.06□□□□□ -0.16
PNKP-215ENST00000600910 PRSS3P2Q8NHM4 247 aa14.06□□□□□ -0.16
PNKP-215ENST00000600910 NXT2Q9NPJ8 142 aaKnown RBP14.06□□□□□ -0.16
PNKP-215ENST00000600910 TRBV25-1A0A075B6N4 114 aa14.04□□□□□ -0.16
PNKP-215ENST00000600910 AMTP48728 403 aa14.04□□□□□ -0.16
PNKP-215ENST00000600910 UBE2DNLQ8IWF7 75 aa14.04□□□□□ -0.16
PNKP-215ENST00000600910 IGHV1-24A0A0C4DH33 117 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms