RNA–Protein interactions for RNA: ENST00000598256.1

LTBP4-222, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-222	ENST00000598256	FAM231C	P0DMU5	169 aa		11.14	□□□□□ -0.63
LTBP4-222	ENST00000598256	GYPE	P15421	78 aa		11.14	□□□□□ -0.63
LTBP4-222	ENST00000598256	ZFAND6	Q6FIF0	208 aa		11.14	□□□□□ -0.63
LTBP4-222	ENST00000598256	VSIG2	Q96IQ7	327 aa		11.14	□□□□□ -0.63
LTBP4-222	ENST00000598256	KLK5	Q9Y337	293 aa	Predicted RBP	11.14	□□□□□ -0.63
LTBP4-222	ENST00000598256	HYDIN	Q4G0P3	5121 aa		11.13	□□□□□ -0.63
LTBP4-222	ENST00000598256	SMKR1	H3BMG3	65 aa		11.13	□□□□□ -0.63
LTBP4-222	ENST00000598256		H3BNG1	76 aa		11.13	□□□□□ -0.63
LTBP4-222	ENST00000598256	APCS	P02743	223 aa		11.13	□□□□□ -0.63
LTBP4-222	ENST00000598256	CKS2	P33552	79 aa		11.13	□□□□□ -0.63
LTBP4-222	ENST00000598256	MRPL18	Q9H0U6	180 aa	Known RBP	11.13	□□□□□ -0.63
LTBP4-222	ENST00000598256	TRAPPC1	Q9Y5R8	145 aa		11.13	□□□□□ -0.63
LTBP4-222	ENST00000598256	ICOS	Q9Y6W8	199 aa		11.13	□□□□□ -0.63
LTBP4-222	ENST00000598256	GAGE12J	A6NER3	117 aa		11.12	□□□□□ -0.63
LTBP4-222	ENST00000598256	COLCA2	A8K830	154 aa		11.12	□□□□□ -0.63
LTBP4-222	ENST00000598256		D6R8Y8	96 aa		11.12	□□□□□ -0.63
LTBP4-222	ENST00000598256	NUDT3	O95989	172 aa		11.12	□□□□□ -0.63
LTBP4-222	ENST00000598256	PPBP	P02775	128 aa		11.12	□□□□□ -0.63
LTBP4-222	ENST00000598256	RPS10	P46783	165 aa	Known RBP	11.12	□□□□□ -0.63
LTBP4-222	ENST00000598256	RPL36A	P83881	106 aa	Known RBP	11.12	□□□□□ -0.63
LTBP4-222	ENST00000598256	GAGE1	Q13065	139 aa		11.12	□□□□□ -0.63
LTBP4-222	ENST00000598256	GAGE4	Q13068	117 aa		11.12	□□□□□ -0.63
LTBP4-222	ENST00000598256	GAGE5	Q13069	117 aa		11.12	□□□□□ -0.63
LTBP4-222	ENST00000598256	GAGE13	Q4V321	117 aa		11.12	□□□□□ -0.63
LTBP4-222	ENST00000598256	OR10J3	Q5JRS4	329 aa		11.12	□□□□□ -0.63
LTBP4-222	ENST00000598256	ORMDL3	Q8N138	153 aa		11.12	□□□□□ -0.63
LTBP4-222	ENST00000598256	C15orf53	Q8NAA6	179 aa		11.12	□□□□□ -0.63
LTBP4-222	ENST00000598256	NEXN-AS1	Q8NBZ9	246 aa		11.12	□□□□□ -0.63
LTBP4-222	ENST00000598256	RPL36AL	Q969Q0	106 aa	Known RBP	11.12	□□□□□ -0.63
LTBP4-222	ENST00000598256	RPL39L	Q96EH5	51 aa	Known RBP	11.12	□□□□□ -0.63
LTBP4-222	ENST00000598256	SRI	P30626	198 aa		11.11	□□□□□ -0.63
LTBP4-222	ENST00000598256	FABP9	Q0Z7S8	132 aa		11.11	□□□□□ -0.63
LTBP4-222	ENST00000598256	MRPL23	Q16540	153 aa	Known RBP	11.11	□□□□□ -0.63
LTBP4-222	ENST00000598256	ZNRF2	Q8NHG8	242 aa		11.11	□□□□□ -0.63
LTBP4-222	ENST00000598256	DNAJC30	Q96LL9	226 aa		11.11	□□□□□ -0.63
LTBP4-222	ENST00000598256	NIT2	Q9NQR4	276 aa		11.11	□□□□□ -0.63
LTBP4-222	ENST00000598256	TNFRSF18	Q9Y5U5	241 aa		11.11	□□□□□ -0.63
LTBP4-222	ENST00000598256	TRBV7-3	A0A075B6L6	115 aa		11.1	□□□□□ -0.63
LTBP4-222	ENST00000598256	GAS8-AS1	O95177	125 aa		11.1	□□□□□ -0.63
LTBP4-222	ENST00000598256	PPP1R17	O96001	155 aa		11.1	□□□□□ -0.63
LTBP4-222	ENST00000598256	RAB5A	P20339	215 aa		11.1	□□□□□ -0.63
LTBP4-222	ENST00000598256	KIAA1644	Q3SXP7	199 aa		11.1	□□□□□ -0.63
LTBP4-222	ENST00000598256	PRELID3A	Q96N28	172 aa		11.1	□□□□□ -0.63
LTBP4-222	ENST00000598256	C3orf84	H3BNL1	204 aa		11.09	□□□□□ -0.63
LTBP4-222	ENST00000598256	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	11.09	□□□□□ -0.63
LTBP4-222	ENST00000598256		Q9UF83	564 aa		11.09	□□□□□ -0.63
LTBP4-222	ENST00000598256		A0A096LPF7	62 aa		11.08	□□□□□ -0.64
LTBP4-222	ENST00000598256	NPY	P01303	97 aa		11.08	□□□□□ -0.64
LTBP4-222	ENST00000598256	NRAC	Q8N912	160 aa		11.08	□□□□□ -0.64
LTBP4-222	ENST00000598256	ST20	Q9HBF5	79 aa		11.08	□□□□□ -0.64
LTBP4-222	ENST00000598256	TNFRSF6B	O95407	300 aa		11.07	□□□□□ -0.64
LTBP4-222	ENST00000598256	LINC00694	P0DN24	101 aa		11.07	□□□□□ -0.64
LTBP4-222	ENST00000598256	SH2D6	Q7Z4S9	175 aa		11.07	□□□□□ -0.64
LTBP4-222	ENST00000598256	LAMTOR2	Q9Y2Q5	125 aa		11.07	□□□□□ -0.64
LTBP4-222	ENST00000598256	TRBV6-5	A0A0K0K1A5	114 aa		11.06	□□□□□ -0.64
LTBP4-222	ENST00000598256	SDHAF1	A6NFY7	115 aa		11.06	□□□□□ -0.64
LTBP4-222	ENST00000598256	PHOX2A	O14813	284 aa		11.06	□□□□□ -0.64
LTBP4-222	ENST00000598256	TCTA	P57738	103 aa		11.06	□□□□□ -0.64
LTBP4-222	ENST00000598256	UBE2D3	P61077	147 aa		11.06	□□□□□ -0.64
LTBP4-222	ENST00000598256	SUMO2	P61956	95 aa	Known RBP	11.06	□□□□□ -0.64
LTBP4-222	ENST00000598256	UBE2D2	P62837	147 aa		11.06	□□□□□ -0.64
LTBP4-222	ENST00000598256	NEGR1	Q7Z3B1	354 aa		11.06	□□□□□ -0.64
LTBP4-222	ENST00000598256	ATP6V0E2	Q8NHE4	81 aa		11.06	□□□□□ -0.64
LTBP4-222	ENST00000598256	IGHV3-38	A0A0C4DH36	116 aa		11.05	□□□□□ -0.64
LTBP4-222	ENST00000598256	TRGC2	P03986	189 aa		11.05	□□□□□ -0.64
LTBP4-222	ENST00000598256	CASC10	Q5T4H9	136 aa		11.05	□□□□□ -0.64
LTBP4-222	ENST00000598256	MAP1LC3A	Q9H492	121 aa		11.05	□□□□□ -0.64
LTBP4-222	ENST00000598256	APLN	Q9ULZ1	77 aa		11.05	□□□□□ -0.64
LTBP4-222	ENST00000598256	DAZ4	Q86SG3	579 aa	Known RBP	11.04	□□□□□ -0.64
LTBP4-222	ENST00000598256	C20orf78	Q9BR46	151 aa		11.04	□□□□□ -0.64
LTBP4-222	ENST00000598256	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.04	□□□□□ -0.64
LTBP4-222	ENST00000598256	TMEM70	Q9BUB7	260 aa		11.04	□□□□□ -0.64
LTBP4-222	ENST00000598256	DAZ3	Q9NR90	486 aa	Known RBP	11.04	□□□□□ -0.64
LTBP4-222	ENST00000598256	SMIM2	Q9BVW6	85 aa		11.03	□□□□□ -0.64
LTBP4-222	ENST00000598256	PLEC	Q15149	4684 aa	Known RBP	11.03	□□□□□ -0.64
LTBP4-222	ENST00000598256	PMCH	P20382	165 aa		11.02	□□□□□ -0.65
LTBP4-222	ENST00000598256	LOC389332	A0A1B0GUA5	103 aa		11.01	□□□□□ -0.65
LTBP4-222	ENST00000598256		I3L3M4	83 aa		11.01	□□□□□ -0.65
LTBP4-222	ENST00000598256	POLR2K	P53803	58 aa	Known RBP	11.01	□□□□□ -0.65
LTBP4-222	ENST00000598256	COTL1	Q14019	142 aa		11.01	□□□□□ -0.65
LTBP4-222	ENST00000598256	DEFB104A	Q8WTQ1	72 aa		11.01	□□□□□ -0.65
LTBP4-222	ENST00000598256	GTSF1L	Q9H1H1	148 aa		11.01	□□□□□ -0.65
LTBP4-222	ENST00000598256	VCY	O14598	125 aa		11	□□□□□ -0.65
LTBP4-222	ENST00000598256	CCL18	P55774	89 aa		11	□□□□□ -0.65
LTBP4-222	ENST00000598256	RPL32	P62910	135 aa	Known RBP	11	□□□□□ -0.65
LTBP4-222	ENST00000598256	TMEM97	Q5BJF2	176 aa		11	□□□□□ -0.65
LTBP4-222	ENST00000598256	KIR2DL4	Q99706	377 aa		11	□□□□□ -0.65
LTBP4-222	ENST00000598256	TRBV27	A0A0K0K1C4	114 aa		10.99	□□□□□ -0.65
LTBP4-222	ENST00000598256	IQCJ	Q1A5X6	159 aa		10.99	□□□□□ -0.65
LTBP4-222	ENST00000598256	LYPD5	Q6UWN5	251 aa		10.99	□□□□□ -0.65
LTBP4-222	ENST00000598256	UBE2DNL	Q8IWF7	75 aa		10.99	□□□□□ -0.65
LTBP4-222	ENST00000598256	LCE6A	A0A183	80 aa		10.98	□□□□□ -0.65
LTBP4-222	ENST00000598256	PRSS47	A8MTI9	375 aa		10.98	□□□□□ -0.65
LTBP4-222	ENST00000598256	FCER1G	P30273	86 aa		10.98	□□□□□ -0.65
LTBP4-222	ENST00000598256	ESRG	Q1W209	222 aa		10.98	□□□□□ -0.65
LTBP4-222	ENST00000598256	PRSS3P2	Q8NHM4	247 aa		10.98	□□□□□ -0.65
LTBP4-222	ENST00000598256	C18orf32	Q8TCD1	76 aa		10.98	□□□□□ -0.65
LTBP4-222	ENST00000598256	NXT2	Q9NPJ8	142 aa	Known RBP	10.98	□□□□□ -0.65
LTBP4-222	ENST00000598256	TRBV25-1	A0A075B6N4	114 aa		10.97	□□□□□ -0.65
LTBP4-222	ENST00000598256	AMT	P48728	403 aa		10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms