RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 TMEM97Q5BJF2 176 aa6.32□□□□□ -1.4
LIG1-209ENST00000596104 RNF185Q96GF1 192 aa6.32□□□□□ -1.4
LIG1-209ENST00000596104 SSBP4Q9BWG4 385 aaPredicted RBP6.32□□□□□ -1.4
LIG1-209ENST00000596104 ALG5Q9Y673 324 aa6.32□□□□□ -1.4
LIG1-209ENST00000596104 SNAI2O43623 268 aa6.31□□□□□ -1.4
LIG1-209ENST00000596104 FHITP49789 147 aa6.31□□□□□ -1.4
LIG1-209ENST00000596104 DEFA1P59665 94 aa6.31□□□□□ -1.4
LIG1-209ENST00000596104 DEFA3P59666 94 aa6.31□□□□□ -1.4
LIG1-209ENST00000596104 IQCJQ1A5X6 159 aa6.31□□□□□ -1.4
LIG1-209ENST00000596104 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.31□□□□□ -1.4
LIG1-209ENST00000596104 C20orf203Q8NBC4 194 aa6.31□□□□□ -1.4
LIG1-209ENST00000596104 SPACA4Q8TDM5 124 aa6.31□□□□□ -1.4
LIG1-209ENST00000596104 TCEAL7Q9BRU2 100 aa6.31□□□□□ -1.4
LIG1-209ENST00000596104 DERL1Q9BUN8 251 aa6.31□□□□□ -1.4
LIG1-209ENST00000596104 ZNF471Q9BX82 626 aaPredicted RBP6.31□□□□□ -1.4
LIG1-209ENST00000596104 KIF25-AS1Q9Y6Z4 181 aa6.31□□□□□ -1.4
LIG1-209ENST00000596104 TNXBP22105 4242 aa6.31□□□□□ -1.4
LIG1-209ENST00000596104 IGLV10-54A0A075B6I4 117 aa6.3□□□□□ -1.4
LIG1-209ENST00000596104 TRBV25-1A0A075B6N4 114 aa6.3□□□□□ -1.4
LIG1-209ENST00000596104 IGHV3-64A0A075B6Q5 118 aa6.3□□□□□ -1.4
LIG1-209ENST00000596104 hDV102S1A0JD36 115 aa6.3□□□□□ -1.4
LIG1-209ENST00000596104 MAP1LC3B2A6NCE7 125 aa6.3□□□□□ -1.4
LIG1-209ENST00000596104 OR5AL1P0C617 328 aa6.3□□□□□ -1.4
LIG1-209ENST00000596104 REG3AQ06141 175 aa6.3□□□□□ -1.4
LIG1-209ENST00000596104 MAP1LC3BQ9GZQ8 125 aa6.3□□□□□ -1.4
LIG1-209ENST00000596104 PLAC8Q9NZF1 115 aa6.3□□□□□ -1.4
LIG1-209ENST00000596104 RNF213Q63HN8 5207 aa6.29□□□□□ -1.4
LIG1-209ENST00000596104 BORCS7-ASMTA0A0B4J1R7 106 aa6.29□□□□□ -1.4
LIG1-209ENST00000596104 TRAV8-4A0A0B4J246 113 aa6.29□□□□□ -1.4
LIG1-209ENST00000596104 MUC21A0A0G2JKD1 596 aa6.29□□□□□ -1.4
LIG1-209ENST00000596104 MUC21A0A140T8X8 626 aa6.29□□□□□ -1.4
LIG1-209ENST00000596104 F5H697 171 aa6.29□□□□□ -1.4
LIG1-209ENST00000596104 PHOX2AO14813 284 aa6.29□□□□□ -1.4
LIG1-209ENST00000596104 P01737 135 aa6.29□□□□□ -1.4
LIG1-209ENST00000596104 AKR1C3P42330 323 aa6.29□□□□□ -1.4
LIG1-209ENST00000596104 AKR1C8PQ5T2L2 129 aa6.29□□□□□ -1.4
LIG1-209ENST00000596104 SPANXN1Q5VSR9 72 aa6.29□□□□□ -1.4
LIG1-209ENST00000596104 MLST8Q9BVC4 326 aa6.29□□□□□ -1.4
LIG1-209ENST00000596104 GFRA4Q9GZZ7 299 aa6.29□□□□□ -1.4
LIG1-209ENST00000596104 IGLV4-60A0A075B6I1 120 aa6.28□□□□□ -1.4
LIG1-209ENST00000596104 IGHV1-24A0A0C4DH33 117 aa6.28□□□□□ -1.4
LIG1-209ENST00000596104 A6NHS1 94 aa6.28□□□□□ -1.4
LIG1-209ENST00000596104 ODF1Q14990 250 aa6.28□□□□□ -1.4
LIG1-209ENST00000596104 CST9LP1Q5W188 147 aa6.28□□□□□ -1.4
LIG1-209ENST00000596104 INO80EQ8NBZ0 244 aaPredicted RBP6.28□□□□□ -1.4
LIG1-209ENST00000596104 LINC01600Q96MT4 127 aa6.28□□□□□ -1.4
LIG1-209ENST00000596104 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.27□□□□□ -1.41
LIG1-209ENST00000596104 A0A1B0GUV1 79 aa6.27□□□□□ -1.41
LIG1-209ENST00000596104 M0QY20 66 aa6.27□□□□□ -1.41
LIG1-209ENST00000596104 GIPP09681 153 aaPredicted RBP6.27□□□□□ -1.41
LIG1-209ENST00000596104 STOML3Q8TAV4 291 aa6.27□□□□□ -1.41
LIG1-209ENST00000596104 DPH3Q96FX2 82 aa6.27□□□□□ -1.41
LIG1-209ENST00000596104 AP1S3Q96PC3 154 aa6.27□□□□□ -1.41
LIG1-209ENST00000596104 MED28Q9H204 178 aa6.27□□□□□ -1.41
LIG1-209ENST00000596104 AP5S1Q9NUS5 200 aa6.27□□□□□ -1.41
LIG1-209ENST00000596104 FXYD6-FXYD2A0A087WZ82 144 aa6.26□□□□□ -1.41
LIG1-209ENST00000596104 PAGE4O60829 102 aa6.26□□□□□ -1.41
LIG1-209ENST00000596104 S100A9P06702 114 aaKnown RBP6.26□□□□□ -1.41
LIG1-209ENST00000596104 GZMBP10144 247 aa6.26□□□□□ -1.41
LIG1-209ENST00000596104 SSTP61278 116 aa6.26□□□□□ -1.41
LIG1-209ENST00000596104 BAGE2Q86Y30 109 aa6.26□□□□□ -1.41
LIG1-209ENST00000596104 C15orf56Q8N910 161 aa6.26□□□□□ -1.41
LIG1-209ENST00000596104 C7orf33Q8WU49 177 aa6.26□□□□□ -1.41
LIG1-209ENST00000596104 SCO2A0A1W2PP80 73 aa6.25□□□□□ -1.41
LIG1-209ENST00000596104 G3V3Q6 166 aa6.25□□□□□ -1.41
LIG1-209ENST00000596104 SMIM17P0DL12 118 aa6.25□□□□□ -1.41
LIG1-209ENST00000596104 RAB5CP51148 216 aa6.25□□□□□ -1.41
LIG1-209ENST00000596104 KRTAP10-8P60410 259 aa6.25□□□□□ -1.41
LIG1-209ENST00000596104 PRR3P79522 188 aaKnown RBP6.25□□□□□ -1.41
LIG1-209ENST00000596104 COX6A2Q02221 97 aa6.25□□□□□ -1.41
LIG1-209ENST00000596104 TMEM243Q9BU79 118 aa6.25□□□□□ -1.41
LIG1-209ENST00000596104 DPH3P1Q9H4G8 78 aa6.25□□□□□ -1.41
LIG1-209ENST00000596104 CYTL1Q9NRR1 136 aa6.25□□□□□ -1.41
LIG1-209ENST00000596104 A0A0J9YXV3 536 aa6.24□□□□□ -1.41
LIG1-209ENST00000596104 H7C1H1 209 aa6.24□□□□□ -1.41
LIG1-209ENST00000596104 SUMO4Q6EEV6 95 aa6.24□□□□□ -1.41
LIG1-209ENST00000596104 WDR73Q6P4I2 378 aa6.24□□□□□ -1.41
LIG1-209ENST00000596104 PRSS3P2Q8NHM4 247 aa6.24□□□□□ -1.41
LIG1-209ENST00000596104 NDUFS6O75380 124 aaKnown RBP6.23□□□□□ -1.41
LIG1-209ENST00000596104 MGPP08493 103 aa6.23□□□□□ -1.41
LIG1-209ENST00000596104 IGLC6P0CF74 106 aa6.23□□□□□ -1.41
LIG1-209ENST00000596104 RPS10P46783 165 aaKnown RBP6.23□□□□□ -1.41
LIG1-209ENST00000596104 NKX2-5P52952 324 aaPredicted RBP6.23□□□□□ -1.41
LIG1-209ENST00000596104 MBD3L1Q8WWY6 194 aa6.23□□□□□ -1.41
LIG1-209ENST00000596104 PGLYRP4Q96LB8 373 aa6.23□□□□□ -1.41
LIG1-209ENST00000596104 IGKV2-24A0A0C4DH68 120 aa6.22□□□□□ -1.41
LIG1-209ENST00000596104 GAGE12HA6NDE8 117 aa6.22□□□□□ -1.41
LIG1-209ENST00000596104 MAJINQ3KP22 176 aa6.22□□□□□ -1.41
LIG1-209ENST00000596104 HIGD2BQ4VC39 106 aa6.22□□□□□ -1.41
LIG1-209ENST00000596104 CFAP161Q6P656 301 aa6.22□□□□□ -1.41
LIG1-209ENST00000596104 RASL11AQ6T310 242 aa6.22□□□□□ -1.41
LIG1-209ENST00000596104 TMUB2Q71RG4 321 aa6.22□□□□□ -1.41
LIG1-209ENST00000596104 GTSF1Q8WW33 167 aa6.22□□□□□ -1.41
LIG1-209ENST00000596104 SULT1A2P50226 295 aa6.21□□□□□ -1.42
LIG1-209ENST00000596104 STPG4Q8N801 248 aa6.21□□□□□ -1.42
LIG1-209ENST00000596104 FER1L6-AS1Q8NA97 138 aa6.21□□□□□ -1.42
LIG1-209ENST00000596104 SFT2D1Q8WV19 159 aa6.21□□□□□ -1.42
LIG1-209ENST00000596104 TPPP3Q9BW30 176 aa6.21□□□□□ -1.42
LIG1-209ENST00000596104 NIT2Q9NQR4 276 aa6.21□□□□□ -1.42
LIG1-209ENST00000596104 A0A096LNI7 61 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 174.3 ms