RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 TOR2AQ5JU69 321 aa12.33□□□□□ -0.44
SHKBP1-202ENST00000593764 RPP21Q9H633 154 aaKnown RBP12.33□□□□□ -0.44
SHKBP1-202ENST00000593764 TRBV6-8A0A0A6YYG3 113 aa12.32□□□□□ -0.44
SHKBP1-202ENST00000593764 M0QY20 66 aa12.32□□□□□ -0.44
SHKBP1-202ENST00000593764 PSCAO43653 123 aa12.32□□□□□ -0.44
SHKBP1-202ENST00000593764 CTRLP40313 264 aa12.32□□□□□ -0.44
SHKBP1-202ENST00000593764 CDPF1Q6NVV7 123 aa12.32□□□□□ -0.44
SHKBP1-202ENST00000593764 WDR73Q6P4I2 378 aa12.32□□□□□ -0.44
SHKBP1-202ENST00000593764 FAM210AQ96ND0 272 aa12.32□□□□□ -0.44
SHKBP1-202ENST00000593764 TRAV8-3A0A0A6YYJ7 113 aa12.31□□□□□ -0.44
SHKBP1-202ENST00000593764 NDUFS6O75380 124 aaKnown RBP12.31□□□□□ -0.44
SHKBP1-202ENST00000593764 CNFNQ9BYD5 112 aa12.31□□□□□ -0.44
SHKBP1-202ENST00000593764 EIF5A2Q9GZV4 153 aaKnown RBP12.31□□□□□ -0.44
SHKBP1-202ENST00000593764 CEBPGP53567 150 aa12.3□□□□□ -0.44
SHKBP1-202ENST00000593764 NTM-AS1Q6ZSK4 140 aa12.3□□□□□ -0.44
SHKBP1-202ENST00000593764 GTSF1Q8WW33 167 aa12.3□□□□□ -0.44
SHKBP1-202ENST00000593764 DNAJC30Q96LL9 226 aa12.3□□□□□ -0.44
SHKBP1-202ENST00000593764 KRTAP4-5Q9BYR2 181 aa12.3□□□□□ -0.44
SHKBP1-202ENST00000593764 URGCP-MRPS24S4R325 110 aa12.3□□□□□ -0.44
SHKBP1-202ENST00000593764 MGPP08493 103 aa12.29□□□□□ -0.44
SHKBP1-202ENST00000593764 SUMO4Q6EEV6 95 aa12.29□□□□□ -0.44
SHKBP1-202ENST00000593764 CHCHD7Q9BUK0 85 aa12.29□□□□□ -0.44
SHKBP1-202ENST00000593764 TM2D2Q9BX73 214 aa12.29□□□□□ -0.44
SHKBP1-202ENST00000593764 SRP19P09132 144 aaKnown RBP12.28□□□□□ -0.44
SHKBP1-202ENST00000593764 TRGC1P0CF51 173 aa12.28□□□□□ -0.44
SHKBP1-202ENST00000593764 FAM231DQ6ZW35 169 aa12.28□□□□□ -0.44
SHKBP1-202ENST00000593764 MAPKAPK5-AS1Q8N8E1 139 aa12.28□□□□□ -0.44
SHKBP1-202ENST00000593764 KLK12Q9UKR0 248 aa12.28□□□□□ -0.44
SHKBP1-202ENST00000593764 A0A087WX48 190 aa12.27□□□□□ -0.45
SHKBP1-202ENST00000593764 SMIM7Q9BQ49 75 aa12.27□□□□□ -0.45
SHKBP1-202ENST00000593764 DPH3P1Q9H4G8 78 aa12.27□□□□□ -0.45
SHKBP1-202ENST00000593764 TMEM262E9PQX1 116 aa12.26□□□□□ -0.45
SHKBP1-202ENST00000593764 H7C1H1 209 aa12.26□□□□□ -0.45
SHKBP1-202ENST00000593764 GATCO43716 136 aaKnown RBP12.26□□□□□ -0.45
SHKBP1-202ENST00000593764 KRTAP10-1P60331 282 aa12.26□□□□□ -0.45
SHKBP1-202ENST00000593764 WFDC2Q14508 124 aa12.26□□□□□ -0.45
SHKBP1-202ENST00000593764 TWIST1Q15672 202 aa12.26□□□□□ -0.45
SHKBP1-202ENST00000593764 LINC01551Q86U37 167 aa12.26□□□□□ -0.45
SHKBP1-202ENST00000593764 Q8N814 137 aa12.26□□□□□ -0.45
SHKBP1-202ENST00000593764 RASL11AQ6T310 242 aa12.25□□□□□ -0.45
SHKBP1-202ENST00000593764 TEX261Q6UWH6 196 aa12.25□□□□□ -0.45
SHKBP1-202ENST00000593764 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.25□□□□□ -0.45
SHKBP1-202ENST00000593764 ZNF727A8MUV8 499 aa12.24□□□□□ -0.45
SHKBP1-202ENST00000593764 A8MWL6 223 aa12.24□□□□□ -0.45
SHKBP1-202ENST00000593764 FOXA3P55318 350 aaPredicted RBP12.24□□□□□ -0.45
SHKBP1-202ENST00000593764 ELOBQ15370 118 aa12.24□□□□□ -0.45
SHKBP1-202ENST00000593764 MPV17L2Q567V2 206 aa12.24□□□□□ -0.45
SHKBP1-202ENST00000593764 TMEM97Q5BJF2 176 aa12.24□□□□□ -0.45
SHKBP1-202ENST00000593764 UBE2WQ96B02 151 aa12.24□□□□□ -0.45
SHKBP1-202ENST00000593764 ABCA13Q86UQ4 5058 aa12.24□□□□□ -0.45
SHKBP1-202ENST00000593764 C9JQL5 133 aa12.23□□□□□ -0.45
SHKBP1-202ENST00000593764 CT83Q5H943 113 aa12.23□□□□□ -0.45
SHKBP1-202ENST00000593764 KCNIP4Q6PIL6 250 aa12.23□□□□□ -0.45
SHKBP1-202ENST00000593764 ATRAIDQ6UW56 229 aa12.23□□□□□ -0.45
SHKBP1-202ENST00000593764 NTN5Q8WTR8 489 aaPredicted RBP12.23□□□□□ -0.45
SHKBP1-202ENST00000593764 CHCHD5Q9BSY4 110 aa12.23□□□□□ -0.45
SHKBP1-202ENST00000593764 NIT2Q9NQR4 276 aa12.23□□□□□ -0.45
SHKBP1-202ENST00000593764 GCSHP23434 173 aa12.22□□□□□ -0.45
SHKBP1-202ENST00000593764 XGP55808 180 aa12.22□□□□□ -0.45
SHKBP1-202ENST00000593764 IQCJQ1A5X6 159 aa12.22□□□□□ -0.45
SHKBP1-202ENST00000593764 ENHOQ6UWT2 76 aa12.22□□□□□ -0.45
SHKBP1-202ENST00000593764 GATD1Q8NB37 220 aa12.22□□□□□ -0.45
SHKBP1-202ENST00000593764 PGLYRP4Q96LB8 373 aa12.22□□□□□ -0.45
SHKBP1-202ENST00000593764 COX11Q9Y6N1 276 aa12.22□□□□□ -0.45
SHKBP1-202ENST00000593764 TRBV25-1A0A075B6N4 114 aa12.21□□□□□ -0.45
SHKBP1-202ENST00000593764 IGKV2D-24A0A075B6R9 120 aa12.21□□□□□ -0.45
SHKBP1-202ENST00000593764 IGLV5-52A0A0A0MRZ9 124 aa12.21□□□□□ -0.45
SHKBP1-202ENST00000593764 SRSF3P84103 164 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-202ENST00000593764 C15orf54Q8N8G6 183 aa12.21□□□□□ -0.45
SHKBP1-202ENST00000593764 Q8N976 141 aa12.21□□□□□ -0.45
SHKBP1-202ENST00000593764 BAALCQ8WXS3 180 aa12.21□□□□□ -0.45
SHKBP1-202ENST00000593764 RMI2Q96E14 147 aa12.21□□□□□ -0.45
SHKBP1-202ENST00000593764 TRAV26-2A0A0B4J265 109 aa12.2□□□□□ -0.46
SHKBP1-202ENST00000593764 LECT2O14960 151 aa12.2□□□□□ -0.46
SHKBP1-202ENST00000593764 Q0VG73 95 aa12.2□□□□□ -0.46
SHKBP1-202ENST00000593764 Q8N1X5 172 aa12.2□□□□□ -0.46
SHKBP1-202ENST00000593764 OSTCQ9NRP0 149 aa12.2□□□□□ -0.46
SHKBP1-202ENST00000593764 DNAH8Q96JB1 4490 aa12.19□□□□□ -0.46
SHKBP1-202ENST00000593764 IGHV1-24A0A0C4DH33 117 aa12.19□□□□□ -0.46
SHKBP1-202ENST00000593764 ANGP03950 147 aaKnown RBP12.19□□□□□ -0.46
SHKBP1-202ENST00000593764 PKIAP61925 76 aa12.19□□□□□ -0.46
SHKBP1-202ENST00000593764 GAGE6Q13070 117 aa12.19□□□□□ -0.46
SHKBP1-202ENST00000593764 TSKUQ8WUA8 353 aa12.19□□□□□ -0.46
SHKBP1-202ENST00000593764 RBX1P62877 108 aa12.18□□□□□ -0.46
SHKBP1-202ENST00000593764 TMEM241Q24JQ0 296 aa12.18□□□□□ -0.46
SHKBP1-202ENST00000593764 FAM74A3Q4VXF1 159 aa12.18□□□□□ -0.46
SHKBP1-202ENST00000593764 DEFB104AQ8WTQ1 72 aa12.18□□□□□ -0.46
SHKBP1-202ENST00000593764 FRZBQ92765 325 aa12.18□□□□□ -0.46
SHKBP1-202ENST00000593764 GFRA4Q9GZZ7 299 aa12.18□□□□□ -0.46
SHKBP1-202ENST00000593764 V9GYV3 84 aa12.18□□□□□ -0.46
SHKBP1-202ENST00000593764 FAM231BA6NCW3 169 aa12.17□□□□□ -0.46
SHKBP1-202ENST00000593764 HIGD1CA8MV81 97 aa12.17□□□□□ -0.46
SHKBP1-202ENST00000593764 SMIM15Q7Z3B0 74 aa12.17□□□□□ -0.46
SHKBP1-202ENST00000593764 ISOC2Q96AB3 205 aa12.17□□□□□ -0.46
SHKBP1-202ENST00000593764 PRR34Q9NV39 138 aa12.17□□□□□ -0.46
SHKBP1-202ENST00000593764 FAT1Q14517 4588 aa12.16□□□□□ -0.46
SHKBP1-202ENST00000593764 RPL23P62829 140 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-202ENST00000593764 RPL39LQ96EH5 51 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-202ENST00000593764 PEA15Q15121 130 aa12.15□□□□□ -0.46
SHKBP1-202ENST00000593764 TMEM243Q9BU79 118 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms