RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 WDR73Q6P4I2 378 aa6.2□□□□□ -1.42
DNMT1-223ENST00000591239 NEXN-AS1Q8NBZ9 246 aa6.2□□□□□ -1.42
DNMT1-223ENST00000591239 OR10G8Q8NGN5 311 aa6.2□□□□□ -1.42
DNMT1-223ENST00000591239 ZNF727A8MUV8 499 aa6.19□□□□□ -1.42
DNMT1-223ENST00000591239 IBA57-AS1B1ANH7 110 aa6.19□□□□□ -1.42
DNMT1-223ENST00000591239 GATCO43716 136 aaKnown RBP6.19□□□□□ -1.42
DNMT1-223ENST00000591239 MGPP08493 103 aa6.19□□□□□ -1.42
DNMT1-223ENST00000591239 TRGC1P0CF51 173 aa6.19□□□□□ -1.42
DNMT1-223ENST00000591239 ERVFC1-1P60608 527 aa6.19□□□□□ -1.42
DNMT1-223ENST00000591239 FAM231DQ6ZW35 169 aa6.19□□□□□ -1.42
DNMT1-223ENST00000591239 SPATA12Q7Z6I5 190 aa6.19□□□□□ -1.42
DNMT1-223ENST00000591239 LINC01551Q86U37 167 aa6.19□□□□□ -1.42
DNMT1-223ENST00000591239 Q8N3U1 123 aa6.19□□□□□ -1.42
DNMT1-223ENST00000591239 CNFNQ9BYD5 112 aa6.19□□□□□ -1.42
DNMT1-223ENST00000591239 A8MWL6 223 aa6.18□□□□□ -1.42
DNMT1-223ENST00000591239 C16orf90A8MZG2 172 aa6.18□□□□□ -1.42
DNMT1-223ENST00000591239 TWIST1Q15672 202 aa6.18□□□□□ -1.42
DNMT1-223ENST00000591239 GTSF1Q8WW33 167 aa6.18□□□□□ -1.42
DNMT1-223ENST00000591239 TRBV6-8A0A0A6YYG3 113 aa6.17□□□□□ -1.42
DNMT1-223ENST00000591239 C9JQL5 133 aa6.17□□□□□ -1.42
DNMT1-223ENST00000591239 H7C1H1 209 aa6.17□□□□□ -1.42
DNMT1-223ENST00000591239 M0QY20 66 aa6.17□□□□□ -1.42
DNMT1-223ENST00000591239 KRTAP10-2P60368 255 aa6.17□□□□□ -1.42
DNMT1-223ENST00000591239 SRSF3P84103 164 aaKnown RBP6.17□□□□□ -1.42
DNMT1-223ENST00000591239 LAGE3Q14657 143 aa6.17□□□□□ -1.42
DNMT1-223ENST00000591239 PEA15Q15121 130 aa6.17□□□□□ -1.42
DNMT1-223ENST00000591239 FAM74A3Q4VXF1 159 aa6.17□□□□□ -1.42
DNMT1-223ENST00000591239 ANKRD39Q53RE8 183 aa6.17□□□□□ -1.42
DNMT1-223ENST00000591239 CT83Q5H943 113 aa6.17□□□□□ -1.42
DNMT1-223ENST00000591239 SUMO4Q6EEV6 95 aa6.17□□□□□ -1.42
DNMT1-223ENST00000591239 DAZ4Q86SG3 579 aaKnown RBP6.17□□□□□ -1.42
DNMT1-223ENST00000591239 NIT1Q86X76 327 aa6.17□□□□□ -1.42
DNMT1-223ENST00000591239 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.17□□□□□ -1.42
DNMT1-223ENST00000591239 DPH3P1Q9H4G8 78 aa6.17□□□□□ -1.42
DNMT1-223ENST00000591239 Q9HAA7 133 aa6.17□□□□□ -1.42
DNMT1-223ENST00000591239 DAZ3Q9NR90 486 aaKnown RBP6.17□□□□□ -1.42
DNMT1-223ENST00000591239 URGCP-MRPS24S4R325 110 aa6.17□□□□□ -1.42
DNMT1-223ENST00000591239 A0A087WTM6 91 aa6.16□□□□□ -1.42
DNMT1-223ENST00000591239 PSCAO43653 123 aa6.16□□□□□ -1.42
DNMT1-223ENST00000591239 TMEM241Q24JQ0 296 aa6.16□□□□□ -1.42
DNMT1-223ENST00000591239 LCE2AQ5TA79 106 aaPredicted RBP6.16□□□□□ -1.42
DNMT1-223ENST00000591239 PGLYRP4Q96LB8 373 aa6.16□□□□□ -1.42
DNMT1-223ENST00000591239 DNAJC30Q96LL9 226 aa6.16□□□□□ -1.42
DNMT1-223ENST00000591239 SMDT1Q9H4I9 107 aa6.16□□□□□ -1.42
DNMT1-223ENST00000591239 OSTCQ9NRP0 149 aa6.16□□□□□ -1.42
DNMT1-223ENST00000591239 A0A087WX48 190 aa6.15□□□□□ -1.42
DNMT1-223ENST00000591239 TRAV8-3A0A0A6YYJ7 113 aa6.15□□□□□ -1.42
DNMT1-223ENST00000591239 FOXA3P55318 350 aaPredicted RBP6.15□□□□□ -1.42
DNMT1-223ENST00000591239 TMEM97Q5BJF2 176 aa6.15□□□□□ -1.42
DNMT1-223ENST00000591239 CDPF1Q6NVV7 123 aa6.15□□□□□ -1.42
DNMT1-223ENST00000591239 RASL11AQ6T310 242 aa6.15□□□□□ -1.42
DNMT1-223ENST00000591239 NTM-AS1Q6ZSK4 140 aa6.15□□□□□ -1.42
DNMT1-223ENST00000591239 SMIM15Q7Z3B0 74 aa6.15□□□□□ -1.42
DNMT1-223ENST00000591239 TSKUQ8WUA8 353 aa6.15□□□□□ -1.42
DNMT1-223ENST00000591239 CHCHD7Q9BUK0 85 aa6.15□□□□□ -1.42
DNMT1-223ENST00000591239 DYNC1H1Q14204 4646 aaKnown RBP6.15□□□□□ -1.43
DNMT1-223ENST00000591239 FAM231BA6NCW3 169 aa6.14□□□□□ -1.43
DNMT1-223ENST00000591239 HIGD1CA8MV81 97 aa6.14□□□□□ -1.43
DNMT1-223ENST00000591239 TMEM262E9PQX1 116 aa6.14□□□□□ -1.43
DNMT1-223ENST00000591239 RPL23P62829 140 aaKnown RBP6.14□□□□□ -1.43
DNMT1-223ENST00000591239 KCNIP4Q6PIL6 250 aa6.14□□□□□ -1.43
DNMT1-223ENST00000591239 C15orf54Q8N8G6 183 aa6.14□□□□□ -1.43
DNMT1-223ENST00000591239 ISOC2Q96AB3 205 aa6.14□□□□□ -1.43
DNMT1-223ENST00000591239 CHCHD5Q9BSY4 110 aa6.14□□□□□ -1.43
DNMT1-223ENST00000591239 TM2D2Q9BX73 214 aa6.14□□□□□ -1.43
DNMT1-223ENST00000591239 GFRA4Q9GZZ7 299 aa6.14□□□□□ -1.43
DNMT1-223ENST00000591239 NIT2Q9NQR4 276 aa6.14□□□□□ -1.43
DNMT1-223ENST00000591239 NAT8Q9UHE5 227 aa6.14□□□□□ -1.43
DNMT1-223ENST00000591239 KLK12Q9UKR0 248 aa6.14□□□□□ -1.43
DNMT1-223ENST00000591239 V9GYV3 84 aa6.14□□□□□ -1.43
DNMT1-223ENST00000591239 KIAA1109Q2LD37 5005 aa6.14□□□□□ -1.43
DNMT1-223ENST00000591239 TRAV26-2A0A0B4J265 109 aa6.13□□□□□ -1.43
DNMT1-223ENST00000591239 A0A1B0GUT8 65 aa6.13□□□□□ -1.43
DNMT1-223ENST00000591239 LRCOL1A6NCL2 159 aa6.13□□□□□ -1.43
DNMT1-223ENST00000591239 FUSP35637 526 aaKnown RBP eCLIP6.13□□□□□ -1.43
DNMT1-223ENST00000591239 ELOBQ15370 118 aa6.13□□□□□ -1.43
DNMT1-223ENST00000591239 ADIRFQ15847 76 aa6.13□□□□□ -1.43
DNMT1-223ENST00000591239 GATD1Q8NB37 220 aa6.13□□□□□ -1.43
DNMT1-223ENST00000591239 BORCS7Q96B45 105 aa6.13□□□□□ -1.43
DNMT1-223ENST00000591239 LRP1BQ9NZR2 4599 aa6.13□□□□□ -1.43
DNMT1-223ENST00000591239 TRBV25-1A0A075B6N4 114 aa6.12□□□□□ -1.43
DNMT1-223ENST00000591239 IGHV1-24A0A0C4DH33 117 aa6.12□□□□□ -1.43
DNMT1-223ENST00000591239 HERC2O95714 4834 aa6.12□□□□□ -1.43
DNMT1-223ENST00000591239 RAB14P61106 215 aa6.12□□□□□ -1.43
DNMT1-223ENST00000591239 PKIAP61925 76 aa6.12□□□□□ -1.43
DNMT1-223ENST00000591239 IQCJQ1A5X6 159 aa6.12□□□□□ -1.43
DNMT1-223ENST00000591239 MPV17L2Q567V2 206 aa6.12□□□□□ -1.43
DNMT1-223ENST00000591239 FRZBQ92765 325 aa6.12□□□□□ -1.43
DNMT1-223ENST00000591239 UBE2WQ96B02 151 aa6.12□□□□□ -1.43
DNMT1-223ENST00000591239 KRTAP17-1Q9BYP8 105 aa6.12□□□□□ -1.43
DNMT1-223ENST00000591239 CDK2AP2O75956 126 aa6.11□□□□□ -1.43
DNMT1-223ENST00000591239 ANGP03950 147 aaKnown RBP6.11□□□□□ -1.43
DNMT1-223ENST00000591239 GAGE6Q13070 117 aa6.11□□□□□ -1.43
DNMT1-223ENST00000591239 NUP35Q8NFH5 326 aa6.11□□□□□ -1.43
DNMT1-223ENST00000591239 RMI2Q96E14 147 aa6.11□□□□□ -1.43
DNMT1-223ENST00000591239 RPL39LQ96EH5 51 aaKnown RBP6.11□□□□□ -1.43
DNMT1-223ENST00000591239 COX11Q9Y6N1 276 aa6.11□□□□□ -1.43
DNMT1-223ENST00000591239 DNAH5Q8TE73 4624 aa6.11□□□□□ -1.43
DNMT1-223ENST00000591239 IGKV2D-24A0A075B6R9 120 aa6.1□□□□□ -1.43
DNMT1-223ENST00000591239 RBX1P62877 108 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms