RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 IGHV3OR16-12A0A075B7B8 117 aa6.38□□□□□ -1.39
SMAD4-206ENST00000588860 TRAV9-2A0A087WT02 112 aa6.38□□□□□ -1.39
SMAD4-206ENST00000588860 M0R2P5 195 aa6.38□□□□□ -1.39
SMAD4-206ENST00000588860 NUDT3O95989 172 aa6.38□□□□□ -1.39
SMAD4-206ENST00000588860 CRYGDP07320 174 aa6.38□□□□□ -1.39
SMAD4-206ENST00000588860 C9orf66Q5T8R8 295 aa6.38□□□□□ -1.39
SMAD4-206ENST00000588860 ZNF705AQ6ZN79 300 aaPredicted RBP6.38□□□□□ -1.39
SMAD4-206ENST00000588860 C1orf158Q8N1D5 194 aa6.38□□□□□ -1.39
SMAD4-206ENST00000588860 C11orf72Q8NBR9 251 aa6.38□□□□□ -1.39
SMAD4-206ENST00000588860 C18orf15Q96N68 181 aa6.38□□□□□ -1.39
SMAD4-206ENST00000588860 CITED1Q99966 193 aa6.38□□□□□ -1.39
SMAD4-206ENST00000588860 MCRIP2Q9BUT9 160 aaKnown RBP6.38□□□□□ -1.39
SMAD4-206ENST00000588860 C19orf73Q9NVV2 129 aa6.38□□□□□ -1.39
SMAD4-206ENST00000588860 EREGO14944 169 aa6.37□□□□□ -1.39
SMAD4-206ENST00000588860 MAJINQ3KP22 176 aa6.37□□□□□ -1.39
SMAD4-206ENST00000588860 LINC01545Q5VT33 79 aa6.37□□□□□ -1.39
SMAD4-206ENST00000588860 PMCHL2Q9BQD1 86 aa6.37□□□□□ -1.39
SMAD4-206ENST00000588860 SPXQ9BT56 116 aa6.37□□□□□ -1.39
SMAD4-206ENST00000588860 CSTL1Q9H114 145 aa6.37□□□□□ -1.39
SMAD4-206ENST00000588860 MRPL16Q9NX20 251 aaKnown RBP6.37□□□□□ -1.39
SMAD4-206ENST00000588860 GOLT1BQ9Y3E0 138 aa6.37□□□□□ -1.39
SMAD4-206ENST00000588860 A8MWV9 139 aa6.36□□□□□ -1.39
SMAD4-206ENST00000588860 AZU1P20160 251 aa6.36□□□□□ -1.39
SMAD4-206ENST00000588860 DEFA6Q01524 100 aa6.36□□□□□ -1.39
SMAD4-206ENST00000588860 ORMDL2Q53FV1 153 aa6.36□□□□□ -1.39
SMAD4-206ENST00000588860 MORN3Q6PF18 240 aaPredicted RBP6.36□□□□□ -1.39
SMAD4-206ENST00000588860 NEGR1Q7Z3B1 354 aa6.36□□□□□ -1.39
SMAD4-206ENST00000588860 GTSCR1Q86UQ5 136 aa6.36□□□□□ -1.39
SMAD4-206ENST00000588860 PTH2Q96A98 100 aa6.36□□□□□ -1.39
SMAD4-206ENST00000588860 IGHV3-73A0A0B4J1V6 119 aa6.35□□□□□ -1.39
SMAD4-206ENST00000588860 TRBV6-5A0A0K0K1A5 114 aa6.35□□□□□ -1.39
SMAD4-206ENST00000588860 hDV102S1A0JD36 115 aa6.35□□□□□ -1.39
SMAD4-206ENST00000588860 HSBP1L1C9JCN9 74 aa6.35□□□□□ -1.39
SMAD4-206ENST00000588860 K7EMI3 77 aa6.35□□□□□ -1.39
SMAD4-206ENST00000588860 M0QY20 66 aa6.35□□□□□ -1.39
SMAD4-206ENST00000588860 ATP5LO75964 103 aa6.35□□□□□ -1.39
SMAD4-206ENST00000588860 GIG44P09565 113 aaPredicted RBP6.35□□□□□ -1.39
SMAD4-206ENST00000588860 INSL3P51460 131 aa6.35□□□□□ -1.39
SMAD4-206ENST00000588860 RPL32P62910 135 aaKnown RBP6.35□□□□□ -1.39
SMAD4-206ENST00000588860 PIK3CD-AS1Q5SR53 167 aa6.35□□□□□ -1.39
SMAD4-206ENST00000588860 MIEN1Q9BRT3 115 aa6.35□□□□□ -1.39
SMAD4-206ENST00000588860 NDUFAF3Q9BU61 184 aa6.35□□□□□ -1.39
SMAD4-206ENST00000588860 H7C1H1 209 aa6.34□□□□□ -1.39
SMAD4-206ENST00000588860 VCYO14598 125 aa6.34□□□□□ -1.39
SMAD4-206ENST00000588860 LGALS9BQ3B8N2 356 aa6.34□□□□□ -1.39
SMAD4-206ENST00000588860 CFAP126Q5VTH2 177 aa6.34□□□□□ -1.39
SMAD4-206ENST00000588860 LGALS9CQ6DKI2 356 aa6.34□□□□□ -1.39
SMAD4-206ENST00000588860 IL17DQ8TAD2 202 aa6.34□□□□□ -1.39
SMAD4-206ENST00000588860 C1QTNF4Q9BXJ3 329 aa6.34□□□□□ -1.39
SMAD4-206ENST00000588860 TRGV1A0A0A0MS02 117 aa6.33□□□□□ -1.4
SMAD4-206ENST00000588860 SDHAF1A6NFY7 115 aa6.33□□□□□ -1.4
SMAD4-206ENST00000588860 RHODO00212 210 aa6.33□□□□□ -1.4
SMAD4-206ENST00000588860 RS1O15537 224 aa6.33□□□□□ -1.4
SMAD4-206ENST00000588860 PRSS1P07477 247 aa6.33□□□□□ -1.4
SMAD4-206ENST00000588860 IGLL1P15814 213 aa6.33□□□□□ -1.4
SMAD4-206ENST00000588860 POLR2KP53803 58 aaKnown RBP6.33□□□□□ -1.4
SMAD4-206ENST00000588860 UFSP1Q6NVU6 142 aa6.33□□□□□ -1.4
SMAD4-206ENST00000588860 RNASE8Q8TDE3 154 aaKnown RBP6.33□□□□□ -1.4
SMAD4-206ENST00000588860 TMEM263Q8WUH6 116 aaKnown RBP6.33□□□□□ -1.4
SMAD4-206ENST00000588860 TOMM6Q96B49 74 aa6.33□□□□□ -1.4
SMAD4-206ENST00000588860 C16orf74Q96GX8 76 aa6.33□□□□□ -1.4
SMAD4-206ENST00000588860 C14orf144Q96I85 54 aa6.33□□□□□ -1.4
SMAD4-206ENST00000588860 SCGB3A1Q96QR1 104 aa6.33□□□□□ -1.4
SMAD4-206ENST00000588860 KIR2DL4Q99706 377 aa6.33□□□□□ -1.4
SMAD4-206ENST00000588860 UQCR10Q9UDW1 63 aa6.33□□□□□ -1.4
SMAD4-206ENST00000588860 NOTCH3Q9UM47 2321 aa6.32□□□□□ -1.4
SMAD4-206ENST00000588860 TENM1Q9UKZ4 2725 aa6.32□□□□□ -1.4
SMAD4-206ENST00000588860 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.32□□□□□ -1.4
SMAD4-206ENST00000588860 P0DMU3 169 aa6.32□□□□□ -1.4
SMAD4-206ENST00000588860 FAM231AP0DMU4 169 aa6.32□□□□□ -1.4
SMAD4-206ENST00000588860 FAM231CP0DMU5 169 aa6.32□□□□□ -1.4
SMAD4-206ENST00000588860 IGLC3P0DOY3 106 aa6.32□□□□□ -1.4
SMAD4-206ENST00000588860 C2orf66Q6UXQ4 117 aa6.32□□□□□ -1.4
SMAD4-206ENST00000588860 C12orf54Q6X4T0 127 aa6.32□□□□□ -1.4
SMAD4-206ENST00000588860 ZFP2Q6ZN57 461 aa6.32□□□□□ -1.4
SMAD4-206ENST00000588860 Q6ZN92 141 aa6.32□□□□□ -1.4
SMAD4-206ENST00000588860 DEFB104AQ8WTQ1 72 aa6.32□□□□□ -1.4
SMAD4-206ENST00000588860 EDA2RQ9HAV5 297 aa6.32□□□□□ -1.4
SMAD4-206ENST00000588860 DKK2Q9UBU2 259 aa6.32□□□□□ -1.4
SMAD4-206ENST00000588860 TRBV27A0A0K0K1C4 114 aa6.31□□□□□ -1.4
SMAD4-206ENST00000588860 TSHBP01222 138 aa6.31□□□□□ -1.4
SMAD4-206ENST00000588860 G0S2P27469 103 aa6.31□□□□□ -1.4
SMAD4-206ENST00000588860 ODF1Q14990 250 aa6.31□□□□□ -1.4
SMAD4-206ENST00000588860 RHOHQ15669 191 aa6.31□□□□□ -1.4
SMAD4-206ENST00000588860 RRN3P1Q2M238 152 aa6.31□□□□□ -1.4
SMAD4-206ENST00000588860 Q6ZSN1 163 aa6.31□□□□□ -1.4
SMAD4-206ENST00000588860 CSNK1G2-AS1Q8NCQ2 148 aa6.31□□□□□ -1.4
SMAD4-206ENST00000588860 OR4C5Q8NGB2 326 aa6.31□□□□□ -1.4
SMAD4-206ENST00000588860 CYSLTR1Q9Y271 337 aa6.31□□□□□ -1.4
SMAD4-206ENST00000588860 TNFRSF18Q9Y5U5 241 aa6.31□□□□□ -1.4
SMAD4-206ENST00000588860 I3L3M4 83 aa6.3□□□□□ -1.4
SMAD4-206ENST00000588860 HNRNPA3P51991 378 aaKnown RBP6.3□□□□□ -1.4
SMAD4-206ENST00000588860 Q6ZTI0 123 aa6.3□□□□□ -1.4
SMAD4-206ENST00000588860 NOP10Q9NPE3 64 aaKnown RBP6.3□□□□□ -1.4
SMAD4-206ENST00000588860 TP53TG1Q9Y2A0 90 aa6.3□□□□□ -1.4
SMAD4-206ENST00000588860 A0A087WX48 190 aa6.29□□□□□ -1.4
SMAD4-206ENST00000588860 TRAV4A0A0B4J268 109 aa6.29□□□□□ -1.4
SMAD4-206ENST00000588860 PLAC8L1A1L4L8 177 aa6.29□□□□□ -1.4
SMAD4-206ENST00000588860 LINC01549A6NIU2 74 aa6.29□□□□□ -1.4
SMAD4-206ENST00000588860 DPM2O94777 84 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms