RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 AP1S3Q96PC3 154 aa11.91□□□□□ -0.5
SRSF1-208ENST00000584773 VAX2Q9UIW0 290 aa11.91□□□□□ -0.5
SRSF1-208ENST00000584773 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.9□□□□□ -0.5
SRSF1-208ENST00000584773 IGKV2D-24A0A075B6R9 120 aa11.9□□□□□ -0.5
SRSF1-208ENST00000584773 A0A087WX48 190 aa11.9□□□□□ -0.5
SRSF1-208ENST00000584773 TRBV6-8A0A0A6YYG3 113 aa11.9□□□□□ -0.5
SRSF1-208ENST00000584773 SMR3BP02814 79 aaPredicted RBP11.9□□□□□ -0.5
SRSF1-208ENST00000584773 MGPP08493 103 aa11.9□□□□□ -0.5
SRSF1-208ENST00000584773 TOR2AQ5JU69 321 aa11.9□□□□□ -0.5
SRSF1-208ENST00000584773 FAM30AQ9NZY2 134 aa11.9□□□□□ -0.5
SRSF1-208ENST00000584773 EPM2AB3EWF7 344 aa11.89□□□□□ -0.51
SRSF1-208ENST00000584773 TMEM262E9PQX1 116 aa11.89□□□□□ -0.51
SRSF1-208ENST00000584773 SMIM17P0DL12 118 aa11.89□□□□□ -0.51
SRSF1-208ENST00000584773 MPV17L2Q567V2 206 aa11.89□□□□□ -0.51
SRSF1-208ENST00000584773 ALKAL2Q6UX46 152 aa11.89□□□□□ -0.51
SRSF1-208ENST00000584773 NTM-AS1Q6ZSK4 140 aa11.89□□□□□ -0.51
SRSF1-208ENST00000584773 P01737 135 aa11.88□□□□□ -0.51
SRSF1-208ENST00000584773 RPS20P60866 119 aaKnown RBP11.88□□□□□ -0.51
SRSF1-208ENST00000584773 SMIM12Q96EX1 92 aa11.88□□□□□ -0.51
SRSF1-208ENST00000584773 K7EN84 100 aa11.87□□□□□ -0.51
SRSF1-208ENST00000584773 LINC01620Q4KN68 170 aa11.87□□□□□ -0.51
SRSF1-208ENST00000584773 Q5VSD8 79 aa11.87□□□□□ -0.51
SRSF1-208ENST00000584773 SUMO4Q6EEV6 95 aa11.87□□□□□ -0.51
SRSF1-208ENST00000584773 LYZL1Q6UWQ5 148 aa11.87□□□□□ -0.51
SRSF1-208ENST00000584773 NUDT10Q8NFP7 164 aa11.87□□□□□ -0.51
SRSF1-208ENST00000584773 NUDT11Q96G61 164 aa11.87□□□□□ -0.51
SRSF1-208ENST00000584773 NKX2-5P52952 324 aaPredicted RBP11.86□□□□□ -0.51
SRSF1-208ENST00000584773 C15orf54Q8N8G6 183 aa11.86□□□□□ -0.51
SRSF1-208ENST00000584773 Q8N976 141 aa11.86□□□□□ -0.51
SRSF1-208ENST00000584773 CHCHD5Q9BSY4 110 aa11.86□□□□□ -0.51
SRSF1-208ENST00000584773 CHCHD7Q9BUK0 85 aa11.86□□□□□ -0.51
SRSF1-208ENST00000584773 RNASE7Q9H1E1 156 aaKnown RBP11.86□□□□□ -0.51
SRSF1-208ENST00000584773 M0QY20 66 aa11.86□□□□□ -0.51
SRSF1-208ENST00000584773 KCNIP4Q6PIL6 250 aa11.86□□□□□ -0.51
SRSF1-208ENST00000584773 ENHOQ6UWT2 76 aa11.86□□□□□ -0.51
SRSF1-208ENST00000584773 DEFB104AQ8WTQ1 72 aa11.86□□□□□ -0.51
SRSF1-208ENST00000584773 A0A1B0GVG6 124 aa11.85□□□□□ -0.51
SRSF1-208ENST00000584773 CACNG7P62955 275 aa11.85□□□□□ -0.51
SRSF1-208ENST00000584773 OCC1Q8TAD7 63 aa11.85□□□□□ -0.51
SRSF1-208ENST00000584773 RMI2Q96E14 147 aa11.85□□□□□ -0.51
SRSF1-208ENST00000584773 TMEM70Q9BUB7 260 aa11.85□□□□□ -0.51
SRSF1-208ENST00000584773 ANGP03950 147 aaKnown RBP11.84□□□□□ -0.51
SRSF1-208ENST00000584773 NTF3P20783 257 aa11.84□□□□□ -0.51
SRSF1-208ENST00000584773 GAGE6Q13070 117 aa11.84□□□□□ -0.51
SRSF1-208ENST00000584773 ELOBQ15370 118 aa11.84□□□□□ -0.51
SRSF1-208ENST00000584773 ATRAIDQ6UW56 229 aa11.84□□□□□ -0.51
SRSF1-208ENST00000584773 CLPSL2Q6UWE3 100 aa11.84□□□□□ -0.51
SRSF1-208ENST00000584773 XKRY2A2RUG3 117 aa11.83□□□□□ -0.52
SRSF1-208ENST00000584773 FRZBQ92765 325 aa11.83□□□□□ -0.52
SRSF1-208ENST00000584773 RPP21Q9H633 154 aaKnown RBP11.83□□□□□ -0.52
SRSF1-208ENST00000584773 COX11Q9Y6N1 276 aa11.83□□□□□ -0.52
SRSF1-208ENST00000584773 F2Z2F3 143 aa11.82□□□□□ -0.52
SRSF1-208ENST00000584773 TAGLN2P37802 199 aaKnown RBP11.82□□□□□ -0.52
SRSF1-208ENST00000584773 CTRLP40313 264 aa11.82□□□□□ -0.52
SRSF1-208ENST00000584773 BIN3Q9NQY0 253 aa11.82□□□□□ -0.52
SRSF1-208ENST00000584773 CRPP02741 224 aa11.81□□□□□ -0.52
SRSF1-208ENST00000584773 CEBPGP53567 150 aa11.81□□□□□ -0.52
SRSF1-208ENST00000584773 RBX1P62877 108 aa11.81□□□□□ -0.52
SRSF1-208ENST00000584773 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.81□□□□□ -0.52
SRSF1-208ENST00000584773 DPH3P1Q9H4G8 78 aa11.81□□□□□ -0.52
SRSF1-208ENST00000584773 TRBV25-1A0A075B6N4 114 aa11.8□□□□□ -0.52
SRSF1-208ENST00000584773 TRGC1P0CF51 173 aa11.8□□□□□ -0.52
SRSF1-208ENST00000584773 INAFM2P0DMQ5 153 aa11.8□□□□□ -0.52
SRSF1-208ENST00000584773 BLOC1S1P78537 153 aa11.8□□□□□ -0.52
SRSF1-208ENST00000584773 Q0VG73 95 aa11.8□□□□□ -0.52
SRSF1-208ENST00000584773 TWIST1Q15672 202 aa11.8□□□□□ -0.52
SRSF1-208ENST00000584773 RASL11AQ6T310 242 aa11.8□□□□□ -0.52
SRSF1-208ENST00000584773 LYPD6BQ8NI32 183 aa11.8□□□□□ -0.52
SRSF1-208ENST00000584773 GTSF1Q8WW33 167 aa11.8□□□□□ -0.52
SRSF1-208ENST00000584773 C1orf43Q9BWL3 253 aa11.8□□□□□ -0.52
SRSF1-208ENST00000584773 H7C1H1 209 aa11.79□□□□□ -0.52
SRSF1-208ENST00000584773 IQCJQ1A5X6 159 aa11.79□□□□□ -0.52
SRSF1-208ENST00000584773 TMEM97Q5BJF2 176 aa11.79□□□□□ -0.52
SRSF1-208ENST00000584773 TRAV26-2A0A0B4J265 109 aa11.78□□□□□ -0.52
SRSF1-208ENST00000584773 IGHV1-24A0A0C4DH33 117 aa11.78□□□□□ -0.52
SRSF1-208ENST00000584773 HLA-DQA1P01909 254 aa11.78□□□□□ -0.52
SRSF1-208ENST00000584773 FOXA3P55318 350 aaPredicted RBP11.78□□□□□ -0.52
SRSF1-208ENST00000584773 Q6ZSA8 131 aa11.78□□□□□ -0.52
SRSF1-208ENST00000584773 LINC00269Q8N2A0 174 aa11.78□□□□□ -0.52
SRSF1-208ENST00000584773 TMEM250H0YL14 139 aa11.77□□□□□ -0.53
SRSF1-208ENST00000584773 CNFNQ9BYD5 112 aa11.77□□□□□ -0.53
SRSF1-208ENST00000584773 MYCBP2O75592 4640 aa11.76□□□□□ -0.53
SRSF1-208ENST00000584773 GATCO43716 136 aaKnown RBP11.76□□□□□ -0.53
SRSF1-208ENST00000584773 WDR73Q6P4I2 378 aa11.76□□□□□ -0.53
SRSF1-208ENST00000584773 GATD1Q8NB37 220 aa11.76□□□□□ -0.53
SRSF1-208ENST00000584773 GFRA4Q9GZZ7 299 aa11.76□□□□□ -0.53
SRSF1-208ENST00000584773 NIT2Q9NQR4 276 aa11.76□□□□□ -0.53
SRSF1-208ENST00000584773 PRR34Q9NV39 138 aa11.76□□□□□ -0.53
SRSF1-208ENST00000584773 FLG2Q5D862 2391 aaPredicted RBP11.76□□□□□ -0.53
SRSF1-208ENST00000584773 PKIAP61925 76 aa11.75□□□□□ -0.53
SRSF1-208ENST00000584773 KRTAP26-1Q6PEX3 210 aa11.75□□□□□ -0.53
SRSF1-208ENST00000584773 C20orf203Q8NBC4 194 aa11.75□□□□□ -0.53
SRSF1-208ENST00000584773 HERC1Q15751 4861 aa11.75□□□□□ -0.53
SRSF1-208ENST00000584773 IGLV4-60A0A075B6I1 120 aa11.74□□□□□ -0.53
SRSF1-208ENST00000584773 USP17L23D6RBM5 183 aa11.74□□□□□ -0.53
SRSF1-208ENST00000584773 FAM229AH3BQW9 127 aa11.74□□□□□ -0.53
SRSF1-208ENST00000584773 MIAQ16674 131 aa11.74□□□□□ -0.53
SRSF1-208ENST00000584773 RPL39LQ96EH5 51 aaKnown RBP11.74□□□□□ -0.53
SRSF1-208ENST00000584773 PGLYRP4Q96LB8 373 aa11.74□□□□□ -0.53
SRSF1-208ENST00000584773 TMEM243Q9BU79 118 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms