RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 MED13Q9UHV7 2174 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 IGF2RP11717 2491 aa2.73□□□□□ -1.97
SMCHD1-208ENST00000583344 FLNBO75369 2602 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 TENM4Q6N022 2769 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 A0A087WX48 190 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 IGKV2D-26A0A0A0MRZ7 120 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 IGHV3-21A0A0B4J1V1 117 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 E7EQL1 145 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 F6UB75 175 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 J3QR89 54 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 M0R3E3 92 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 GNG7O60262 68 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 CNIH1O95406 144 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 IL4P05112 153 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 CTSGP08311 255 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 ZNF80P51504 273 aaPredicted RBP2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 BSPH1Q075Z2 132 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 C12orf74Q32Q52 190 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 Q8N6K4 173 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 TMEM158Q8WZ71 300 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 ARPC1AQ92747 370 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 RPEQ96AT9 228 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 EEF1AKMT3Q96AZ1 226 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 HIST1H4GQ99525 98 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 CHAC1Q9BUX1 264 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 C21orf62Q9NYP8 219 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 LENEPQ9Y5L5 61 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 PCNX2A6NKB5 2137 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 IGSF10Q6WRI0 2623 aa2.72□□□□□ -1.97
SMCHD1-208ENST00000583344 ZZEF1O43149 2961 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 DNAJC13O75165 2243 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 TRBV7-3A0A075B6L6 115 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 LINC01549A6NIU2 74 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 ODF3BA8MYP8 253 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 SMKR1H3BMG3 65 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 H7C1H1 209 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 M0R1W7 72 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 SLC25A16P16260 332 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 PRTN3P24158 256 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 PLNP26678 52 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 NMUP48645 174 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 FXYD2P54710 66 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 RIPPLY3P57055 190 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 WFDC2Q14508 124 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 C5orf64Q2M2E5 130 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 SAMD13Q5VXD3 122 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 ATP6V0E2Q8NHE4 81 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 BAALCQ8WXS3 180 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 RAB37Q96AX2 223 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 MRAP2Q96G30 205 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 SLC50A1Q9BRV3 221 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 SPANXB1Q9NS25 103 aaPredicted RBP2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 TIMM8BQ9Y5J9 83 aaPredicted RBP2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 HILPDAQ9Y5L2 63 aa2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 HEATR1Q9H583 2144 aaKnown RBP2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 DSPP15924 2871 aaKnown RBP2.71□□□□□ -1.98
SMCHD1-208ENST00000583344 UNC79Q9P2D8 2635 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 IGHV3OR16-13A0A075B7E8 117 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 IGKV2-40A0A087WW87 121 aaPredicted RBP2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 TMSB15BA0A087X1C1 80 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 TRAV40A0A0B4J280 105 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 IGHV7-4-1A0A0J9YVY3 117 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 IGKV2D-40P01614 121 aaPredicted RBP2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 ORM1P02763 201 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 APELAP0DMC3 54 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 FXYD7P58549 80 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 ERCC8Q13216 396 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 RRN3P1Q2M238 152 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 FBXL19-AS1Q494R0 122 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 ORMDL2Q53FV1 153 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 MINOS1Q5TGZ0 78 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 C11orf71Q6IPW1 123 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 SBSPONQ8IVN8 264 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 DYNAPQ8N1N2 210 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 CHCHD10Q8WYQ3 142 aaPredicted RBP2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 TOMM6Q96B49 74 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 LINC01600Q96MT4 127 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 C18orf15Q96N68 181 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 FOXC2Q99958 501 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 C20orf78Q9BR46 151 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 AGPAT4-IT1Q9H0P7 198 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 DYNLRB1Q9NP97 96 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 MRPL35Q9NZE8 188 aaKnown RBP2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 MINOS1-NBL1R4GNA1 71 aa2.7□□□□□ -1.98
SMCHD1-208ENST00000583344 FREM2Q5SZK8 3169 aa2.69□□□□□ -1.98
SMCHD1-208ENST00000583344 TRAV8-2A0A0B4J237 113 aa2.69□□□□□ -1.98
SMCHD1-208ENST00000583344 MYMXA0A1B0GTQ4 84 aa2.69□□□□□ -1.98
SMCHD1-208ENST00000583344 CLPSL1A2RUU4 121 aa2.69□□□□□ -1.98
SMCHD1-208ENST00000583344 F8VRH5 84 aa2.69□□□□□ -1.98
SMCHD1-208ENST00000583344 H3BMG7 143 aa2.69□□□□□ -1.98
SMCHD1-208ENST00000583344 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.69□□□□□ -1.98
SMCHD1-208ENST00000583344 M0QXV9 152 aa2.69□□□□□ -1.98
SMCHD1-208ENST00000583344 M0R381 172 aa2.69□□□□□ -1.98
SMCHD1-208ENST00000583344 PPP1R17O96001 155 aa2.69□□□□□ -1.98
SMCHD1-208ENST00000583344 UBE2D1P51668 147 aa2.69□□□□□ -1.98
SMCHD1-208ENST00000583344 MORN3Q6PF18 240 aaPredicted RBP2.69□□□□□ -1.98
SMCHD1-208ENST00000583344 C2orf66Q6UXQ4 117 aa2.69□□□□□ -1.98
SMCHD1-208ENST00000583344 LINC00336Q6ZUF6 198 aa2.69□□□□□ -1.98
SMCHD1-208ENST00000583344 Q8N9W7 124 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms