RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 TRGC1P0CF51 173 aa16.72■□□□□ 0.27
CDC42EP4-205ENST00000580315 NEXN-AS1Q8NBZ9 246 aa16.72■□□□□ 0.27
CDC42EP4-205ENST00000580315 MGPP08493 103 aa16.71■□□□□ 0.27
CDC42EP4-205ENST00000580315 WDR73Q6P4I2 378 aa16.71■□□□□ 0.27
CDC42EP4-205ENST00000580315 SMIM7Q9BQ49 75 aa16.71■□□□□ 0.27
CDC42EP4-205ENST00000580315 URGCP-MRPS24S4R325 110 aa16.71■□□□□ 0.27
CDC42EP4-205ENST00000580315 PSCAO43653 123 aa16.7■□□□□ 0.26
CDC42EP4-205ENST00000580315 CTRLP40313 264 aa16.7■□□□□ 0.26
CDC42EP4-205ENST00000580315 LAGE3Q14657 143 aa16.7■□□□□ 0.26
CDC42EP4-205ENST00000580315 Q9HAA7 133 aa16.7■□□□□ 0.26
CDC42EP4-205ENST00000580315 H7C1H1 209 aa16.69■□□□□ 0.26
CDC42EP4-205ENST00000580315 GATCO43716 136 aaKnown RBP16.69■□□□□ 0.26
CDC42EP4-205ENST00000580315 NTF3P20783 257 aa16.69■□□□□ 0.26
CDC42EP4-205ENST00000580315 TEX261Q6UWH6 196 aa16.69■□□□□ 0.26
CDC42EP4-205ENST00000580315 FAM231DQ6ZW35 169 aa16.69■□□□□ 0.26
CDC42EP4-205ENST00000580315 KCNIP4Q6PIL6 250 aa16.68■□□□□ 0.26
CDC42EP4-205ENST00000580315 A0A087WTM6 91 aa16.67■□□□□ 0.26
CDC42EP4-205ENST00000580315 ZNF727A8MUV8 499 aa16.67■□□□□ 0.26
CDC42EP4-205ENST00000580315 SRP19P09132 144 aaKnown RBP16.67■□□□□ 0.26
CDC42EP4-205ENST00000580315 DPH3P1Q9H4G8 78 aa16.67■□□□□ 0.26
CDC42EP4-205ENST00000580315 TWIST1Q15672 202 aa16.66■□□□□ 0.26
CDC42EP4-205ENST00000580315 NIT1Q86X76 327 aa16.66■□□□□ 0.26
CDC42EP4-205ENST00000580315 Q8N3U1 123 aa16.66■□□□□ 0.26
CDC42EP4-205ENST00000580315 CNFNQ9BYD5 112 aa16.66■□□□□ 0.26
CDC42EP4-205ENST00000580315 PGPEP1Q9NXJ5 209 aa16.66■□□□□ 0.26
CDC42EP4-205ENST00000580315 A0A087WX48 190 aa16.65■□□□□ 0.26
CDC42EP4-205ENST00000580315 TRBV6-8A0A0A6YYG3 113 aa16.65■□□□□ 0.26
CDC42EP4-205ENST00000580315 TRAV8-3A0A0A6YYJ7 113 aa16.65■□□□□ 0.26
CDC42EP4-205ENST00000580315 A8MWL6 223 aa16.65■□□□□ 0.26
CDC42EP4-205ENST00000580315 TMEM97Q5BJF2 176 aa16.65■□□□□ 0.26
CDC42EP4-205ENST00000580315 DAZ4Q86SG3 579 aaKnown RBP16.65■□□□□ 0.26
CDC42EP4-205ENST00000580315 DNAJC30Q96LL9 226 aa16.65■□□□□ 0.26
CDC42EP4-205ENST00000580315 CHCHD7Q9BUK0 85 aa16.65■□□□□ 0.26
CDC42EP4-205ENST00000580315 TM2D2Q9BX73 214 aa16.65■□□□□ 0.26
CDC42EP4-205ENST00000580315 DAZ3Q9NR90 486 aaKnown RBP16.65■□□□□ 0.26
CDC42EP4-205ENST00000580315 M0QY20 66 aa16.64■□□□□ 0.25
CDC42EP4-205ENST00000580315 CT83Q5H943 113 aa16.64■□□□□ 0.25
CDC42EP4-205ENST00000580315 SUMO4Q6EEV6 95 aa16.64■□□□□ 0.25
CDC42EP4-205ENST00000580315 LINC01551Q86U37 167 aa16.64■□□□□ 0.25
CDC42EP4-205ENST00000580315 EPM2AB3EWF7 344 aa16.63■□□□□ 0.25
CDC42EP4-205ENST00000580315 ELOBQ15370 118 aa16.63■□□□□ 0.25
CDC42EP4-205ENST00000580315 GTSF1Q8WW33 167 aa16.63■□□□□ 0.25
CDC42EP4-205ENST00000580315 CDPF1Q6NVV7 123 aa16.62■□□□□ 0.25
CDC42EP4-205ENST00000580315 SMIM15Q7Z3B0 74 aa16.62■□□□□ 0.25
CDC42EP4-205ENST00000580315 TMEM262E9PQX1 116 aa16.61■□□□□ 0.25
CDC42EP4-205ENST00000580315 PKIAP61925 76 aa16.61■□□□□ 0.25
CDC42EP4-205ENST00000580315 FAM74A3Q4VXF1 159 aa16.61■□□□□ 0.25
CDC42EP4-205ENST00000580315 RASL11AQ6T310 242 aa16.61■□□□□ 0.25
CDC42EP4-205ENST00000580315 DMBT1Q9UGM3 2413 aaPredicted RBP16.6■□□□□ 0.25
CDC42EP4-205ENST00000580315 PEA15Q15121 130 aa16.6■□□□□ 0.25
CDC42EP4-205ENST00000580315 FUSP35637 526 aaKnown RBP eCLIP16.59■□□□□ 0.25
CDC42EP4-205ENST00000580315 BORCS7Q96B45 105 aa16.59■□□□□ 0.25
CDC42EP4-205ENST00000580315 RMI2Q96E14 147 aa16.59■□□□□ 0.25
CDC42EP4-205ENST00000580315 CHCHD5Q9BSY4 110 aa16.59■□□□□ 0.25
CDC42EP4-205ENST00000580315 OSTCQ9NRP0 149 aa16.59■□□□□ 0.25
CDC42EP4-205ENST00000580315 TMEM241Q24JQ0 296 aa16.58■□□□□ 0.24
CDC42EP4-205ENST00000580315 C15orf54Q8N8G6 183 aa16.58■□□□□ 0.24
CDC42EP4-205ENST00000580315 PGLYRP4Q96LB8 373 aa16.58■□□□□ 0.24
CDC42EP4-205ENST00000580315 SMDT1Q9H4I9 107 aa16.58■□□□□ 0.24
CDC42EP4-205ENST00000580315 NIT2Q9NQR4 276 aa16.58■□□□□ 0.24
CDC42EP4-205ENST00000580315 KLK12Q9UKR0 248 aa16.58■□□□□ 0.24
CDC42EP4-205ENST00000580315 COX11Q9Y6N1 276 aa16.58■□□□□ 0.24
CDC42EP4-205ENST00000580315 FAT1Q14517 4588 aa16.57■□□□□ 0.24
CDC42EP4-205ENST00000580315 FOXA3P55318 350 aaPredicted RBP16.57■□□□□ 0.24
CDC42EP4-205ENST00000580315 XGP55808 180 aa16.57■□□□□ 0.24
CDC42EP4-205ENST00000580315 TRBV25-1A0A075B6N4 114 aa16.56■□□□□ 0.24
CDC42EP4-205ENST00000580315 TSKUQ8WUA8 353 aa16.56■□□□□ 0.24
CDC42EP4-205ENST00000580315 GFRA4Q9GZZ7 299 aa16.56■□□□□ 0.24
CDC42EP4-205ENST00000580315 LRCOL1A6NCL2 159 aa16.55■□□□□ 0.24
CDC42EP4-205ENST00000580315 NTM-AS1Q6ZSK4 140 aa16.55■□□□□ 0.24
CDC42EP4-205ENST00000580315 FRZBQ92765 325 aa16.55■□□□□ 0.24
CDC42EP4-205ENST00000580315 UBE2WQ96B02 151 aa16.55■□□□□ 0.24
CDC42EP4-205ENST00000580315 FAM231BA6NCW3 169 aa16.54■□□□□ 0.24
CDC42EP4-205ENST00000580315 INAFM2P0DMQ5 153 aa16.54■□□□□ 0.24
CDC42EP4-205ENST00000580315 NAT8Q9UHE5 227 aa16.54■□□□□ 0.24
CDC42EP4-205ENST00000580315 IGHV1-24A0A0C4DH33 117 aa16.53■□□□□ 0.24
CDC42EP4-205ENST00000580315 HIGD1CA8MV81 97 aa16.53■□□□□ 0.24
CDC42EP4-205ENST00000580315 Q0VG73 95 aa16.53■□□□□ 0.24
CDC42EP4-205ENST00000580315 ISOC2Q96AB3 205 aa16.53■□□□□ 0.24
CDC42EP4-205ENST00000580315 C9JQL5 133 aa16.52■□□□□ 0.24
CDC42EP4-205ENST00000580315 SRSF3P84103 164 aaKnown RBP16.52■□□□□ 0.24
CDC42EP4-205ENST00000580315 ADIRFQ15847 76 aa16.52■□□□□ 0.24
CDC42EP4-205ENST00000580315 IQCJQ1A5X6 159 aa16.52■□□□□ 0.24
CDC42EP4-205ENST00000580315 MPV17L2Q567V2 206 aa16.52■□□□□ 0.24
CDC42EP4-205ENST00000580315 NTN5Q8WTR8 489 aaPredicted RBP16.52■□□□□ 0.24
CDC42EP4-205ENST00000580315 IGKV2D-24A0A075B6R9 120 aa16.51■□□□□ 0.23
CDC42EP4-205ENST00000580315 A0A1B0GUT8 65 aa16.51■□□□□ 0.23
CDC42EP4-205ENST00000580315 CRPP02741 224 aa16.51■□□□□ 0.23
CDC42EP4-205ENST00000580315 RPL23P62829 140 aaKnown RBP16.51■□□□□ 0.23
CDC42EP4-205ENST00000580315 GATD1Q8NB37 220 aa16.51■□□□□ 0.23
CDC42EP4-205ENST00000580315 ANGP03950 147 aaKnown RBP16.5■□□□□ 0.23
CDC42EP4-205ENST00000580315 Q8N814 137 aa16.5■□□□□ 0.23
CDC42EP4-205ENST00000580315 V9GYV3 84 aa16.5■□□□□ 0.23
CDC42EP4-205ENST00000580315 TRAV26-2A0A0B4J265 109 aa16.49■□□□□ 0.23
CDC42EP4-205ENST00000580315 KRTAP10-1P60331 282 aa16.49■□□□□ 0.23
CDC42EP4-205ENST00000580315 RAB14P61106 215 aa16.49■□□□□ 0.23
CDC42EP4-205ENST00000580315 GAGE6Q13070 117 aa16.49■□□□□ 0.23
CDC42EP4-205ENST00000580315 Q5VSD8 79 aa16.49■□□□□ 0.23
CDC42EP4-205ENST00000580315 ATRAIDQ6UW56 229 aa16.49■□□□□ 0.23
CDC42EP4-205ENST00000580315 IGLV5-52A0A0A0MRZ9 124 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms