RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	KRTAP26-1	Q6PEX3	210 aa		6.13	□□□□□ -1.43
MSI2-208	ENST00000579466	LINC00299	Q6ZSB3	139 aa		6.13	□□□□□ -1.43
MSI2-208	ENST00000579466	FMC1	Q96HJ9	113 aa		6.13	□□□□□ -1.43
MSI2-208	ENST00000579466	DERL1	Q9BUN8	251 aa		6.13	□□□□□ -1.43
MSI2-208	ENST00000579466	TRBV25-1	A0A075B6N4	114 aa		6.12	□□□□□ -1.43
MSI2-208	ENST00000579466		A0A087WYN8	130 aa		6.12	□□□□□ -1.43
MSI2-208	ENST00000579466	MAP1LC3B2	A6NCE7	125 aa		6.12	□□□□□ -1.43
MSI2-208	ENST00000579466		A6NHS1	94 aa		6.12	□□□□□ -1.43
MSI2-208	ENST00000579466	PKIA	P61925	76 aa		6.12	□□□□□ -1.43
MSI2-208	ENST00000579466	REG3A	Q06141	175 aa		6.12	□□□□□ -1.43
MSI2-208	ENST00000579466		Q5BKY6	102 aa		6.12	□□□□□ -1.43
MSI2-208	ENST00000579466	AKR1C8P	Q5T2L2	129 aa		6.12	□□□□□ -1.43
MSI2-208	ENST00000579466	SPANXN1	Q5VSR9	72 aa		6.12	□□□□□ -1.43
MSI2-208	ENST00000579466	PRR27	Q6MZM9	219 aa		6.12	□□□□□ -1.43
MSI2-208	ENST00000579466	STOML3	Q8TAV4	291 aa		6.12	□□□□□ -1.43
MSI2-208	ENST00000579466	ZNF471	Q9BX82	626 aa	Predicted RBP	6.12	□□□□□ -1.43
MSI2-208	ENST00000579466	MAP1LC3B	Q9GZQ8	125 aa		6.12	□□□□□ -1.43
MSI2-208	ENST00000579466	PRR34	Q9NV39	138 aa		6.12	□□□□□ -1.43
MSI2-208	ENST00000579466	IGHV3-64	A0A075B6Q5	118 aa		6.11	□□□□□ -1.43
MSI2-208	ENST00000579466	FXYD6-FXYD2	A0A087WZ82	144 aa		6.11	□□□□□ -1.43
MSI2-208	ENST00000579466	BORCS7-ASMT	A0A0B4J1R7	106 aa		6.11	□□□□□ -1.43
MSI2-208	ENST00000579466	TRBV6-1	A0A0K0K1D8	114 aa		6.11	□□□□□ -1.43
MSI2-208	ENST00000579466		A0A1B0GV50	99 aa		6.11	□□□□□ -1.43
MSI2-208	ENST00000579466	PHOX2A	O14813	284 aa		6.11	□□□□□ -1.43
MSI2-208	ENST00000579466	LTA	P01374	205 aa		6.11	□□□□□ -1.43
MSI2-208	ENST00000579466	MGP	P08493	103 aa		6.11	□□□□□ -1.43
MSI2-208	ENST00000579466	AP5S1	Q9NUS5	200 aa		6.11	□□□□□ -1.43
MSI2-208	ENST00000579466	SMIM17	P0DL12	118 aa		6.1	□□□□□ -1.43
MSI2-208	ENST00000579466	COX8C	Q7Z4L0	72 aa		6.1	□□□□□ -1.43
MSI2-208	ENST00000579466	INO80E	Q8NBZ0	244 aa	Predicted RBP	6.1	□□□□□ -1.43
MSI2-208	ENST00000579466	CLRN3	Q8NCR9	226 aa		6.1	□□□□□ -1.43
MSI2-208	ENST00000579466	NKX6-2	Q9C056	277 aa	Predicted RBP	6.1	□□□□□ -1.43
MSI2-208	ENST00000579466	MED28	Q9H204	178 aa		6.1	□□□□□ -1.43
MSI2-208	ENST00000579466	KIF25-AS1	Q9Y6Z4	181 aa		6.1	□□□□□ -1.43
MSI2-208	ENST00000579466	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	6.09	□□□□□ -1.43
MSI2-208	ENST00000579466	IGHV1-24	A0A0C4DH33	117 aa		6.09	□□□□□ -1.43
MSI2-208	ENST00000579466	IGKV2-24	A0A0C4DH68	120 aa		6.09	□□□□□ -1.43
MSI2-208	ENST00000579466	IGKV3OR2-268	A0A0C4DH90	116 aa		6.09	□□□□□ -1.43
MSI2-208	ENST00000579466	SLPI	P03973	132 aa		6.09	□□□□□ -1.43
MSI2-208	ENST00000579466	CNBP	P62633	177 aa	Known RBP	6.09	□□□□□ -1.43
MSI2-208	ENST00000579466	CIRBP	Q14011	172 aa	Known RBP	6.09	□□□□□ -1.43
MSI2-208	ENST00000579466	TMEM97	Q5BJF2	176 aa		6.09	□□□□□ -1.43
MSI2-208	ENST00000579466	C20orf203	Q8NBC4	194 aa		6.09	□□□□□ -1.43
MSI2-208	ENST00000579466	SPACA4	Q8TDM5	124 aa		6.09	□□□□□ -1.43
MSI2-208	ENST00000579466	C7orf33	Q8WU49	177 aa		6.09	□□□□□ -1.43
MSI2-208	ENST00000579466	GTSF1	Q8WW33	167 aa		6.09	□□□□□ -1.43
MSI2-208	ENST00000579466	TPPP3	Q9BW30	176 aa		6.09	□□□□□ -1.43
MSI2-208	ENST00000579466	GFRA4	Q9GZZ7	299 aa		6.09	□□□□□ -1.43
MSI2-208	ENST00000579466	IGLV4-60	A0A075B6I1	120 aa		6.08	□□□□□ -1.44
MSI2-208	ENST00000579466	SCO2	A0A1W2PP80	73 aa		6.08	□□□□□ -1.44
MSI2-208	ENST00000579466	SNAI2	O43623	268 aa		6.08	□□□□□ -1.44
MSI2-208	ENST00000579466	PAGE4	O60829	102 aa		6.08	□□□□□ -1.44
MSI2-208	ENST00000579466	FHIT	P49789	147 aa		6.08	□□□□□ -1.44
MSI2-208	ENST00000579466	HIGD2B	Q4VC39	106 aa		6.08	□□□□□ -1.44
MSI2-208	ENST00000579466	LYPD6B	Q8NI32	183 aa		6.08	□□□□□ -1.44
MSI2-208	ENST00000579466	AP1S3	Q96PC3	154 aa		6.08	□□□□□ -1.44
MSI2-208	ENST00000579466	VAX2	Q9UIW0	290 aa		6.08	□□□□□ -1.44
MSI2-208	ENST00000579466	GZMB	P10144	247 aa		6.07	□□□□□ -1.44
MSI2-208	ENST00000579466	SULT1A2	P50226	295 aa		6.07	□□□□□ -1.44
MSI2-208	ENST00000579466	NKX2-5	P52952	324 aa	Predicted RBP	6.07	□□□□□ -1.44
MSI2-208	ENST00000579466	COX6A2	Q02221	97 aa		6.07	□□□□□ -1.44
MSI2-208	ENST00000579466	IQCJ	Q1A5X6	159 aa		6.07	□□□□□ -1.44
MSI2-208	ENST00000579466	MAJIN	Q3KP22	176 aa		6.07	□□□□□ -1.44
MSI2-208	ENST00000579466	GAGE12H	A6NDE8	117 aa		6.06	□□□□□ -1.44
MSI2-208	ENST00000579466	UBE2L6	O14933	153 aa		6.06	□□□□□ -1.44
MSI2-208	ENST00000579466	OR5AL1	P0C617	328 aa		6.06	□□□□□ -1.44
MSI2-208	ENST00000579466	PRR3	P79522	188 aa	Known RBP	6.06	□□□□□ -1.44
MSI2-208	ENST00000579466	SUMO4	Q6EEV6	95 aa		6.06	□□□□□ -1.44
MSI2-208	ENST00000579466	WDR73	Q6P4I2	378 aa		6.06	□□□□□ -1.44
MSI2-208	ENST00000579466	BAGE2	Q86Y30	109 aa		6.06	□□□□□ -1.44
MSI2-208	ENST00000579466	C15orf56	Q8N910	161 aa		6.06	□□□□□ -1.44
MSI2-208	ENST00000579466	RNF185	Q96GF1	192 aa		6.06	□□□□□ -1.44
MSI2-208	ENST00000579466	TCEAL7	Q9BRU2	100 aa		6.06	□□□□□ -1.44
MSI2-208	ENST00000579466	TMEM243	Q9BU79	118 aa		6.06	□□□□□ -1.44
MSI2-208	ENST00000579466	PLAC8	Q9NZF1	115 aa		6.06	□□□□□ -1.44
MSI2-208	ENST00000579466	TRAV8-4	A0A0B4J246	113 aa		6.05	□□□□□ -1.44
MSI2-208	ENST00000579466		M0QY20	66 aa		6.05	□□□□□ -1.44
MSI2-208	ENST00000579466	ARPC5	O15511	151 aa		6.05	□□□□□ -1.44
MSI2-208	ENST00000579466	PFDN1	O60925	122 aa		6.05	□□□□□ -1.44
MSI2-208	ENST00000579466		P01737	135 aa		6.05	□□□□□ -1.44
MSI2-208	ENST00000579466	CXCL1	P09341	107 aa		6.05	□□□□□ -1.44
MSI2-208	ENST00000579466	GIP	P09681	153 aa	Predicted RBP	6.05	□□□□□ -1.44
MSI2-208	ENST00000579466	PRSS3P2	Q8NHM4	247 aa		6.05	□□□□□ -1.44
MSI2-208	ENST00000579466	SSBP4	Q9BWG4	385 aa	Predicted RBP	6.05	□□□□□ -1.44
MSI2-208	ENST00000579466		H7C1H1	209 aa		6.04	□□□□□ -1.44
MSI2-208	ENST00000579466	AMT	P48728	403 aa		6.04	□□□□□ -1.44
MSI2-208	ENST00000579466	STPG4	Q8N801	248 aa		6.04	□□□□□ -1.44
MSI2-208	ENST00000579466	FAM213B	Q8TBF2	198 aa		6.04	□□□□□ -1.44
MSI2-208	ENST00000579466	SFT2D1	Q8WV19	159 aa		6.04	□□□□□ -1.44
MSI2-208	ENST00000579466	LINC01600	Q96MT4	127 aa		6.04	□□□□□ -1.44
MSI2-208	ENST00000579466		A0A096LNI7	61 aa		6.03	□□□□□ -1.44
MSI2-208	ENST00000579466	NDUFS6	O75380	124 aa	Known RBP	6.03	□□□□□ -1.44
MSI2-208	ENST00000579466	S100A9	P06702	114 aa	Known RBP	6.03	□□□□□ -1.44
MSI2-208	ENST00000579466	RPS10	P46783	165 aa	Known RBP	6.03	□□□□□ -1.44
MSI2-208	ENST00000579466	RASL11A	Q6T310	242 aa		6.03	□□□□□ -1.44
MSI2-208	ENST00000579466	FER1L6-AS1	Q8NA97	138 aa		6.03	□□□□□ -1.44
MSI2-208	ENST00000579466	MLST8	Q9BVC4	326 aa		6.03	□□□□□ -1.44
MSI2-208	ENST00000579466	CYTL1	Q9NRR1	136 aa		6.03	□□□□□ -1.44
MSI2-208	ENST00000579466		A0A0J9YXV3	536 aa		6.02	□□□□□ -1.45
MSI2-208	ENST00000579466		A0A1B0GUV1	79 aa		6.02	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms