RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 F5H697 171 aa7.4□□□□□ -1.22
CTDNEP1-212ENST00000576613 DEFA1P59665 94 aa7.4□□□□□ -1.22
CTDNEP1-212ENST00000576613 DEFA3P59666 94 aa7.4□□□□□ -1.22
CTDNEP1-212ENST00000576613 IFITM3Q01628 133 aa7.4□□□□□ -1.22
CTDNEP1-212ENST00000576613 REG3AQ06141 175 aa7.4□□□□□ -1.22
CTDNEP1-212ENST00000576613 GAGE6Q13070 117 aa7.4□□□□□ -1.22
CTDNEP1-212ENST00000576613 NTM-AS1Q6ZSK4 140 aa7.4□□□□□ -1.22
CTDNEP1-212ENST00000576613 TCEAL7Q9BRU2 100 aa7.4□□□□□ -1.22
CTDNEP1-212ENST00000576613 ZNF471Q9BX82 626 aaPredicted RBP7.4□□□□□ -1.22
CTDNEP1-212ENST00000576613 VAX2Q9UIW0 290 aa7.4□□□□□ -1.22
CTDNEP1-212ENST00000576613 LRP2P98164 4655 aa7.4□□□□□ -1.23
CTDNEP1-212ENST00000576613 IGLV10-54A0A075B6I4 117 aa7.39□□□□□ -1.23
CTDNEP1-212ENST00000576613 TRAV8-4A0A0B4J246 113 aa7.39□□□□□ -1.23
CTDNEP1-212ENST00000576613 TRBV6-1A0A0K0K1D8 114 aa7.39□□□□□ -1.23
CTDNEP1-212ENST00000576613 LTAP01374 205 aa7.39□□□□□ -1.23
CTDNEP1-212ENST00000576613 P01737 135 aa7.39□□□□□ -1.23
CTDNEP1-212ENST00000576613 ZNF726P1Q15940 193 aa7.39□□□□□ -1.23
CTDNEP1-212ENST00000576613 OR10AG1Q8NH19 301 aa7.39□□□□□ -1.23
CTDNEP1-212ENST00000576613 SPACA4Q8TDM5 124 aa7.39□□□□□ -1.23
CTDNEP1-212ENST00000576613 TNXBP22105 4242 aa7.38□□□□□ -1.23
CTDNEP1-212ENST00000576613 BORCS7-ASMTA0A0B4J1R7 106 aa7.38□□□□□ -1.23
CTDNEP1-212ENST00000576613 IGHV1-24A0A0C4DH33 117 aa7.38□□□□□ -1.23
CTDNEP1-212ENST00000576613 PHOX2AO14813 284 aa7.38□□□□□ -1.23
CTDNEP1-212ENST00000576613 CXCL1P09341 107 aa7.38□□□□□ -1.23
CTDNEP1-212ENST00000576613 CHTF8P0CG12 524 aa7.38□□□□□ -1.23
CTDNEP1-212ENST00000576613 SMIM17P0DL12 118 aa7.38□□□□□ -1.23
CTDNEP1-212ENST00000576613 IQCJQ1A5X6 159 aa7.38□□□□□ -1.23
CTDNEP1-212ENST00000576613 SPANXN1Q5VSR9 72 aa7.38□□□□□ -1.23
CTDNEP1-212ENST00000576613 GZMBP10144 247 aa7.37□□□□□ -1.23
CTDNEP1-212ENST00000576613 FHITP49789 147 aa7.37□□□□□ -1.23
CTDNEP1-212ENST00000576613 AKR1C8PQ5T2L2 129 aa7.37□□□□□ -1.23
CTDNEP1-212ENST00000576613 INO80EQ8NBZ0 244 aaPredicted RBP7.37□□□□□ -1.23
CTDNEP1-212ENST00000576613 STOML3Q8TAV4 291 aa7.37□□□□□ -1.23
CTDNEP1-212ENST00000576613 LINC01600Q96MT4 127 aa7.37□□□□□ -1.23
CTDNEP1-212ENST00000576613 AP1S3Q96PC3 154 aa7.37□□□□□ -1.23
CTDNEP1-212ENST00000576613 PLAC8Q9NZF1 115 aa7.37□□□□□ -1.23
CTDNEP1-212ENST00000576613 MAP1LC3B2A6NCE7 125 aa7.36□□□□□ -1.23
CTDNEP1-212ENST00000576613 SNAI2O43623 268 aa7.36□□□□□ -1.23
CTDNEP1-212ENST00000576613 OR5AL1P0C617 328 aa7.36□□□□□ -1.23
CTDNEP1-212ENST00000576613 AKR1C3P42330 323 aa7.36□□□□□ -1.23
CTDNEP1-212ENST00000576613 CST9LP1Q5W188 147 aa7.36□□□□□ -1.23
CTDNEP1-212ENST00000576613 RPL7L1Q6DKI1 246 aaKnown RBP7.36□□□□□ -1.23
CTDNEP1-212ENST00000576613 MAP1LC3BQ9GZQ8 125 aa7.36□□□□□ -1.23
CTDNEP1-212ENST00000576613 KIF25-AS1Q9Y6Z4 181 aa7.36□□□□□ -1.23
CTDNEP1-212ENST00000576613 H7C1H1 209 aa7.35□□□□□ -1.23
CTDNEP1-212ENST00000576613 S100A9P06702 114 aaKnown RBP7.35□□□□□ -1.23
CTDNEP1-212ENST00000576613 WDR73Q6P4I2 378 aa7.35□□□□□ -1.23
CTDNEP1-212ENST00000576613 C20orf203Q8NBC4 194 aa7.35□□□□□ -1.23
CTDNEP1-212ENST00000576613 SSBP4Q9BWG4 385 aaPredicted RBP7.35□□□□□ -1.23
CTDNEP1-212ENST00000576613 MUC21A0A0G2JKD1 596 aa7.34□□□□□ -1.23
CTDNEP1-212ENST00000576613 MUC21A0A140T8X8 626 aa7.34□□□□□ -1.23
CTDNEP1-212ENST00000576613 A0A1B0GUV1 79 aa7.34□□□□□ -1.23
CTDNEP1-212ENST00000576613 SLPIP03973 132 aa7.34□□□□□ -1.23
CTDNEP1-212ENST00000576613 RAB5CP51148 216 aa7.34□□□□□ -1.23
CTDNEP1-212ENST00000576613 SSTP61278 116 aa7.34□□□□□ -1.23
CTDNEP1-212ENST00000576613 PRR3P79522 188 aaKnown RBP7.34□□□□□ -1.23
CTDNEP1-212ENST00000576613 GTSF1Q8WW33 167 aa7.34□□□□□ -1.23
CTDNEP1-212ENST00000576613 TMEM243Q9BU79 118 aa7.34□□□□□ -1.23
CTDNEP1-212ENST00000576613 ALG5Q9Y673 324 aa7.34□□□□□ -1.23
CTDNEP1-212ENST00000576613 COX6A2Q02221 97 aa7.33□□□□□ -1.24
CTDNEP1-212ENST00000576613 CFAP161Q6P656 301 aa7.33□□□□□ -1.24
CTDNEP1-212ENST00000576613 REG3GQ6UW15 175 aa7.33□□□□□ -1.24
CTDNEP1-212ENST00000576613 MED28Q9H204 178 aa7.33□□□□□ -1.24
CTDNEP1-212ENST00000576613 IGLV4-60A0A075B6I1 120 aa7.32□□□□□ -1.24
CTDNEP1-212ENST00000576613 A0A0J9YXV3 536 aa7.32□□□□□ -1.24
CTDNEP1-212ENST00000576613 M0QY20 66 aa7.32□□□□□ -1.24
CTDNEP1-212ENST00000576613 UBE2L6O14933 153 aa7.32□□□□□ -1.24
CTDNEP1-212ENST00000576613 NDUFS6O75380 124 aaKnown RBP7.32□□□□□ -1.24
CTDNEP1-212ENST00000576613 MGPP08493 103 aa7.32□□□□□ -1.24
CTDNEP1-212ENST00000576613 RPS10P46783 165 aaKnown RBP7.32□□□□□ -1.24
CTDNEP1-212ENST00000576613 SULT1A2P50226 295 aa7.32□□□□□ -1.24
CTDNEP1-212ENST00000576613 MAJINQ3KP22 176 aa7.32□□□□□ -1.24
CTDNEP1-212ENST00000576613 FXYD6-FXYD2A0A087WZ82 144 aa7.31□□□□□ -1.24
CTDNEP1-212ENST00000576613 IGKV2-24A0A0C4DH68 120 aa7.31□□□□□ -1.24
CTDNEP1-212ENST00000576613 PAGE4O60829 102 aa7.31□□□□□ -1.24
CTDNEP1-212ENST00000576613 BAGE2Q86Y30 109 aa7.31□□□□□ -1.24
CTDNEP1-212ENST00000576613 C15orf56Q8N910 161 aa7.31□□□□□ -1.24
CTDNEP1-212ENST00000576613 PGLYRP4Q96LB8 373 aa7.31□□□□□ -1.24
CTDNEP1-212ENST00000576613 MLST8Q9BVC4 326 aa7.31□□□□□ -1.24
CTDNEP1-212ENST00000576613 PFDN1O60925 122 aa7.3□□□□□ -1.24
CTDNEP1-212ENST00000576613 GIPP09681 153 aaPredicted RBP7.3□□□□□ -1.24
CTDNEP1-212ENST00000576613 NKX2-5P52952 324 aaPredicted RBP7.3□□□□□ -1.24
CTDNEP1-212ENST00000576613 Q5BKY6 102 aa7.3□□□□□ -1.24
CTDNEP1-212ENST00000576613 SUMO4Q6EEV6 95 aa7.3□□□□□ -1.24
CTDNEP1-212ENST00000576613 SPINK6Q6UWN8 80 aa7.3□□□□□ -1.24
CTDNEP1-212ENST00000576613 STPG4Q8N801 248 aa7.3□□□□□ -1.24
CTDNEP1-212ENST00000576613 GFRA4Q9GZZ7 299 aa7.3□□□□□ -1.24
CTDNEP1-212ENST00000576613 SCO2A0A1W2PP80 73 aa7.29□□□□□ -1.24
CTDNEP1-212ENST00000576613 GAGE12HA6NDE8 117 aa7.29□□□□□ -1.24
CTDNEP1-212ENST00000576613 KRTAP10-8P60410 259 aa7.29□□□□□ -1.24
CTDNEP1-212ENST00000576613 ODF1Q14990 250 aa7.29□□□□□ -1.24
CTDNEP1-212ENST00000576613 RASL11AQ6T310 242 aa7.29□□□□□ -1.24
CTDNEP1-212ENST00000576613 PRSS3P2Q8NHM4 247 aa7.29□□□□□ -1.24
CTDNEP1-212ENST00000576613 LYPD6BQ8NI32 183 aa7.29□□□□□ -1.24
CTDNEP1-212ENST00000576613 TPPP3Q9BW30 176 aa7.29□□□□□ -1.24
CTDNEP1-212ENST00000576613 LINC00474Q9P2X8 69 aa7.29□□□□□ -1.24
CTDNEP1-212ENST00000576613 PKIGQ9Y2B9 76 aa7.29□□□□□ -1.24
CTDNEP1-212ENST00000576613 AMTP48728 403 aa7.28□□□□□ -1.24
CTDNEP1-212ENST00000576613 COTL1Q14019 142 aa7.28□□□□□ -1.24
CTDNEP1-212ENST00000576613 HIGD2BQ4VC39 106 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 1112.4 ms