RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 DEFB130BP0DP73 79 aa9.96□□□□□ -0.81
PCDHGB3-201ENST00000576222 DEFB130AP0DP74 79 aa9.96□□□□□ -0.81
PCDHGB3-201ENST00000576222 ARHGAP32A7KAX9 2087 aa9.96□□□□□ -0.82
PCDHGB3-201ENST00000576222 H0YGX0 51 aa9.96□□□□□ -0.82
PCDHGB3-201ENST00000576222 CRLF1O75462 422 aa9.96□□□□□ -0.82
PCDHGB3-201ENST00000576222 MIAQ16674 131 aa9.96□□□□□ -0.82
PCDHGB3-201ENST00000576222 SND1-IT1Q9HBX3 110 aa9.96□□□□□ -0.82
PCDHGB3-201ENST00000576222 MRPL23Q16540 153 aaKnown RBP9.95□□□□□ -0.82
PCDHGB3-201ENST00000576222 ORMDL1Q9P0S3 153 aa9.95□□□□□ -0.82
PCDHGB3-201ENST00000576222 BLCAPP62952 87 aa9.95□□□□□ -0.82
PCDHGB3-201ENST00000576222 P0DMU3 169 aa9.95□□□□□ -0.82
PCDHGB3-201ENST00000576222 FAM231AP0DMU4 169 aa9.95□□□□□ -0.82
PCDHGB3-201ENST00000576222 FAM231CP0DMU5 169 aa9.95□□□□□ -0.82
PCDHGB3-201ENST00000576222 VSIG2Q96IQ7 327 aa9.95□□□□□ -0.82
PCDHGB3-201ENST00000576222 TECTAO75443 2155 aa9.94□□□□□ -0.82
PCDHGB3-201ENST00000576222 IGHV3-30P01768 117 aa9.94□□□□□ -0.82
PCDHGB3-201ENST00000576222 IGHV3-30-5P0DP03 117 aa9.94□□□□□ -0.82
PCDHGB3-201ENST00000576222 NFE4Q86UQ8 179 aa9.94□□□□□ -0.82
PCDHGB3-201ENST00000576222 CNFNQ9BYD5 112 aa9.94□□□□□ -0.82
PCDHGB3-201ENST00000576222 ZFP36P26651 326 aaKnown RBP9.94□□□□□ -0.82
PCDHGB3-201ENST00000576222 C11orf21Q9P2W6 132 aa9.94□□□□□ -0.82
PCDHGB3-201ENST00000576222 ZNF22P17026 224 aaPredicted RBP9.94□□□□□ -0.82
PCDHGB3-201ENST00000576222 FAM208BQ5VWN6 2430 aa9.94□□□□□ -0.82
PCDHGB3-201ENST00000576222 TRIAP1O43715 76 aa9.94□□□□□ -0.82
PCDHGB3-201ENST00000576222 GATA3P23771 443 aa9.94□□□□□ -0.82
PCDHGB3-201ENST00000576222 CEMP1Q6PRD7 247 aaPredicted RBP9.94□□□□□ -0.82
PCDHGB3-201ENST00000576222 TRBV12-3P01733 135 aa9.93□□□□□ -0.82
PCDHGB3-201ENST00000576222 ZFAND3Q9H8U3 227 aa9.93□□□□□ -0.82
PCDHGB3-201ENST00000576222 TRAV4A0A0B4J268 109 aa9.93□□□□□ -0.82
PCDHGB3-201ENST00000576222 ATP5G1P05496 136 aa9.93□□□□□ -0.82
PCDHGB3-201ENST00000576222 ELANEP08246 267 aa9.93□□□□□ -0.82
PCDHGB3-201ENST00000576222 GNLYP22749 145 aa9.93□□□□□ -0.82
PCDHGB3-201ENST00000576222 LINC01356Q8N9X3 169 aa9.93□□□□□ -0.82
PCDHGB3-201ENST00000576222 ACACBO00763 2458 aa9.93□□□□□ -0.82
PCDHGB3-201ENST00000576222 TRBV30A0A0K0K1B3 111 aa9.92□□□□□ -0.82
PCDHGB3-201ENST00000576222 TMEM223A0PJW6 202 aa9.92□□□□□ -0.82
PCDHGB3-201ENST00000576222 ODF3BA8MYP8 253 aa9.92□□□□□ -0.82
PCDHGB3-201ENST00000576222 ZFAND2AQ8N6M9 145 aa9.92□□□□□ -0.82
PCDHGB3-201ENST00000576222 ZMAT4Q9H898 229 aa9.92□□□□□ -0.82
PCDHGB3-201ENST00000576222 MUC6Q6W4X9 2439 aa9.92□□□□□ -0.82
PCDHGB3-201ENST00000576222 LY6LH3BQJ8 138 aa9.92□□□□□ -0.82
PCDHGB3-201ENST00000576222 MRPS12O15235 138 aaKnown RBP9.92□□□□□ -0.82
PCDHGB3-201ENST00000576222 LINC01548A6NM66 108 aa9.92□□□□□ -0.82
PCDHGB3-201ENST00000576222 K7EMT4 169 aa9.92□□□□□ -0.82
PCDHGB3-201ENST00000576222 DNAH12Q6ZR08 3092 aa9.91□□□□□ -0.82
PCDHGB3-201ENST00000576222 UQCRQO14949 82 aa9.91□□□□□ -0.82
PCDHGB3-201ENST00000576222 DSCR8Q96T75 97 aa9.91□□□□□ -0.82
PCDHGB3-201ENST00000576222 Q6ZS46 218 aa9.91□□□□□ -0.82
PCDHGB3-201ENST00000576222 FSTL3O95633 263 aa9.9□□□□□ -0.82
PCDHGB3-201ENST00000576222 C5orf38Q86SI9 138 aa9.9□□□□□ -0.82
PCDHGB3-201ENST00000576222 C20orf173Q96LM9 149 aa9.9□□□□□ -0.82
PCDHGB3-201ENST00000576222 SIRPDQ9H106 197 aa9.9□□□□□ -0.82
PCDHGB3-201ENST00000576222 DSCAMO60469 2012 aa9.9□□□□□ -0.82
PCDHGB3-201ENST00000576222 CCDC179H3BU77 68 aa9.9□□□□□ -0.82
PCDHGB3-201ENST00000576222 COX7A2LO14548 114 aa9.9□□□□□ -0.82
PCDHGB3-201ENST00000576222 IGLV4-3A0A075B6K6 122 aa9.89□□□□□ -0.83
PCDHGB3-201ENST00000576222 LECT2O14960 151 aa9.89□□□□□ -0.83
PCDHGB3-201ENST00000576222 RBM3P98179 157 aaKnown RBP9.89□□□□□ -0.83
PCDHGB3-201ENST00000576222 AGRNO00468 2067 aa9.89□□□□□ -0.83
PCDHGB3-201ENST00000576222 A0A0J9YX75 114 aa9.89□□□□□ -0.83
PCDHGB3-201ENST00000576222 Q9HAA7 133 aa9.89□□□□□ -0.83
PCDHGB3-201ENST00000576222 IGHV4-4A0A075B6R2 117 aa9.88□□□□□ -0.83
PCDHGB3-201ENST00000576222 IGHV4-38-2P0DP08 117 aa9.88□□□□□ -0.83
PCDHGB3-201ENST00000576222 NSUN5P1Q3KNT7 163 aa9.88□□□□□ -0.83
PCDHGB3-201ENST00000576222 IGHV4-59P01825 116 aa9.88□□□□□ -0.83
PCDHGB3-201ENST00000576222 COL5A1P20908 1838 aaPredicted RBP9.88□□□□□ -0.83
PCDHGB3-201ENST00000576222 UBE2D1P51668 147 aa9.88□□□□□ -0.83
PCDHGB3-201ENST00000576222 DAZ2Q13117 558 aaKnown RBP9.88□□□□□ -0.83
PCDHGB3-201ENST00000576222 DAZ4Q86SG3 579 aaKnown RBP9.88□□□□□ -0.83
PCDHGB3-201ENST00000576222 DAZ3Q9NR90 486 aaKnown RBP9.88□□□□□ -0.83
PCDHGB3-201ENST00000576222 GPHB5Q86YW7 130 aa9.88□□□□□ -0.83
PCDHGB3-201ENST00000576222 NOP10Q9NPE3 64 aaKnown RBP9.88□□□□□ -0.83
PCDHGB3-201ENST00000576222 IGF2-ASQ6U949 168 aa9.87□□□□□ -0.83
PCDHGB3-201ENST00000576222 COX7B2Q8TF08 81 aa9.87□□□□□ -0.83
PCDHGB3-201ENST00000576222 CEP350Q5VT06 3117 aa9.87□□□□□ -0.83
PCDHGB3-201ENST00000576222 PTPN13Q12923 2485 aa9.87□□□□□ -0.83
PCDHGB3-201ENST00000576222 CEP192Q8TEP8 1941 aa9.87□□□□□ -0.83
PCDHGB3-201ENST00000576222 TRBV27A0A0K0K1C4 114 aa9.87□□□□□ -0.83
PCDHGB3-201ENST00000576222 IGHG2P01859 326 aa9.87□□□□□ -0.83
PCDHGB3-201ENST00000576222 MAPK1IP1LQ8NDC0 245 aa9.87□□□□□ -0.83
PCDHGB3-201ENST00000576222 XCL1P47992 114 aa9.87□□□□□ -0.83
PCDHGB3-201ENST00000576222 APRG1Q8IVJ8 170 aa9.87□□□□□ -0.83
PCDHGB3-201ENST00000576222 EBI3Q14213 229 aa9.86□□□□□ -0.83
PCDHGB3-201ENST00000576222 MIR7-3HGQ8N6C7 128 aa9.86□□□□□ -0.83
PCDHGB3-201ENST00000576222 EXPH5Q8NEV8 1989 aa9.86□□□□□ -0.83
PCDHGB3-201ENST00000576222 DEFB112Q30KQ8 113 aa9.86□□□□□ -0.83
PCDHGB3-201ENST00000576222 RNF152Q8N8N0 203 aa9.86□□□□□ -0.83
PCDHGB3-201ENST00000576222 CDKN2A-AS1Q9UH64 79 aa9.86□□□□□ -0.83
PCDHGB3-201ENST00000576222 TET2Q6N021 2002 aaPredicted RBP9.86□□□□□ -0.83
PCDHGB3-201ENST00000576222 PRR9Q5T870 116 aa9.86□□□□□ -0.83
PCDHGB3-201ENST00000576222 TMEM61Q8N0U2 210 aa9.86□□□□□ -0.83
PCDHGB3-201ENST00000576222 C3orf22Q8N5N4 141 aa9.86□□□□□ -0.83
PCDHGB3-201ENST00000576222 IGHV4OR15-8A0A075B7B6 117 aa9.85□□□□□ -0.83
PCDHGB3-201ENST00000576222 A0A087WW49 117 aa9.85□□□□□ -0.83
PCDHGB3-201ENST00000576222 IGHV4-61A0A0C4DH41 118 aa9.85□□□□□ -0.83
PCDHGB3-201ENST00000576222 M0QY20 66 aa9.85□□□□□ -0.83
PCDHGB3-201ENST00000576222 DEFB136Q30KP8 78 aa9.85□□□□□ -0.83
PCDHGB3-201ENST00000576222 POLR2KP53803 58 aaKnown RBP9.85□□□□□ -0.83
PCDHGB3-201ENST00000576222 CLPSL2Q6UWE3 100 aa9.85□□□□□ -0.83
PCDHGB3-201ENST00000576222 C14orf132Q9NPU4 83 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms