RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-212ENST00000575116 RPL36AP83881 106 aaKnown RBP8.36□□□□□ -1.07
PRPF8-212ENST00000575116 Q0VG73 95 aa8.36□□□□□ -1.07
PRPF8-212ENST00000575116 NEXN-AS1Q8NBZ9 246 aa8.36□□□□□ -1.07
PRPF8-212ENST00000575116 RPL36ALQ969Q0 106 aaKnown RBP8.36□□□□□ -1.07
PRPF8-212ENST00000575116 RPL39LQ96EH5 51 aaKnown RBP8.36□□□□□ -1.07
PRPF8-212ENST00000575116 MAP1LC3AQ9H492 121 aa8.36□□□□□ -1.07
PRPF8-212ENST00000575116 ST20Q9HBF5 79 aa8.36□□□□□ -1.07
PRPF8-212ENST00000575116 MEGF8Q7Z7M0 2845 aa8.36□□□□□ -1.07
PRPF8-212ENST00000575116 TRBV7-3A0A075B6L6 115 aa8.35□□□□□ -1.07
PRPF8-212ENST00000575116 DEFB131BA0A096LNP1 70 aa8.35□□□□□ -1.07
PRPF8-212ENST00000575116 HIST1H2BKO60814 126 aa8.35□□□□□ -1.07
PRPF8-212ENST00000575116 HIST1H2BJP06899 126 aa8.35□□□□□ -1.07
PRPF8-212ENST00000575116 P0DMU3 169 aa8.35□□□□□ -1.07
PRPF8-212ENST00000575116 FAM231AP0DMU4 169 aa8.35□□□□□ -1.07
PRPF8-212ENST00000575116 FAM231CP0DMU5 169 aa8.35□□□□□ -1.07
PRPF8-212ENST00000575116 HTN3P15516 51 aa8.35□□□□□ -1.07
PRPF8-212ENST00000575116 HIST1H2BOP23527 126 aa8.35□□□□□ -1.07
PRPF8-212ENST00000575116 HIST1H2BBP33778 126 aa8.35□□□□□ -1.07
PRPF8-212ENST00000575116 POLR2KP53803 58 aaKnown RBP8.35□□□□□ -1.07
PRPF8-212ENST00000575116 HIST1H2BDP58876 126 aa8.35□□□□□ -1.07
PRPF8-212ENST00000575116 SUMO2P61956 95 aaKnown RBP8.35□□□□□ -1.07
PRPF8-212ENST00000575116 HIST1H2BCP62807 126 aa8.35□□□□□ -1.07
PRPF8-212ENST00000575116 HIST2H2BEQ16778 126 aa8.35□□□□□ -1.07
PRPF8-212ENST00000575116 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.35□□□□□ -1.07
PRPF8-212ENST00000575116 C18orf32Q8TCD1 76 aa8.35□□□□□ -1.07
PRPF8-212ENST00000575116 HIST1H2BHQ93079 126 aa8.35□□□□□ -1.07
PRPF8-212ENST00000575116 HIST1H2BNQ99877 126 aa8.35□□□□□ -1.07
PRPF8-212ENST00000575116 HIST1H2BMQ99879 126 aa8.35□□□□□ -1.07
PRPF8-212ENST00000575116 VCYO14598 125 aa8.34□□□□□ -1.07
PRPF8-212ENST00000575116 ZNRF2Q8NHG8 242 aa8.34□□□□□ -1.07
PRPF8-212ENST00000575116 VSIG2Q96IQ7 327 aa8.34□□□□□ -1.07
PRPF8-212ENST00000575116 NXT2Q9NPJ8 142 aaKnown RBP8.34□□□□□ -1.07
PRPF8-212ENST00000575116 TRAV26-1A0A087WT03 109 aa8.33□□□□□ -1.08
PRPF8-212ENST00000575116 TRBV27A0A0K0K1C4 114 aa8.33□□□□□ -1.08
PRPF8-212ENST00000575116 SDHAF1A6NFY7 115 aa8.33□□□□□ -1.08
PRPF8-212ENST00000575116 SH2D6Q7Z4S9 175 aa8.33□□□□□ -1.08
PRPF8-212ENST00000575116 DAZ4Q86SG3 579 aaKnown RBP8.33□□□□□ -1.08
PRPF8-212ENST00000575116 PRSS3P2Q8NHM4 247 aa8.33□□□□□ -1.08
PRPF8-212ENST00000575116 TMEM70Q9BUB7 260 aa8.33□□□□□ -1.08
PRPF8-212ENST00000575116 SMIM2Q9BVW6 85 aa8.33□□□□□ -1.08
PRPF8-212ENST00000575116 DAZ3Q9NR90 486 aaKnown RBP8.33□□□□□ -1.08
PRPF8-212ENST00000575116 Q9UF83 564 aa8.33□□□□□ -1.08
PRPF8-212ENST00000575116 TENM3Q9P273 2699 aa8.32□□□□□ -1.08
PRPF8-212ENST00000575116 GAGE12JA6NER3 117 aa8.32□□□□□ -1.08
PRPF8-212ENST00000575116 LINC01546A6NGU7 62 aa8.32□□□□□ -1.08
PRPF8-212ENST00000575116 K7EMI3 77 aa8.32□□□□□ -1.08
PRPF8-212ENST00000575116 TCAPO15273 167 aa8.32□□□□□ -1.08
PRPF8-212ENST00000575116 LINC00694P0DN24 101 aa8.32□□□□□ -1.08
PRPF8-212ENST00000575116 GYPEP15421 78 aa8.32□□□□□ -1.08
PRPF8-212ENST00000575116 PMCHP20382 165 aa8.32□□□□□ -1.08
PRPF8-212ENST00000575116 UBE2D3P61077 147 aa8.32□□□□□ -1.08
PRPF8-212ENST00000575116 UBE2D2P62837 147 aa8.32□□□□□ -1.08
PRPF8-212ENST00000575116 GAGE1Q13065 139 aa8.32□□□□□ -1.08
PRPF8-212ENST00000575116 GAGE4Q13068 117 aa8.32□□□□□ -1.08
PRPF8-212ENST00000575116 GAGE5Q13069 117 aa8.32□□□□□ -1.08
PRPF8-212ENST00000575116 MRPL23Q16540 153 aaKnown RBP8.32□□□□□ -1.08
PRPF8-212ENST00000575116 GAGE13Q4V321 117 aa8.32□□□□□ -1.08
PRPF8-212ENST00000575116 Q8N8P6 123 aa8.32□□□□□ -1.08
PRPF8-212ENST00000575116 PHLDA1Q8WV24 401 aaPredicted RBP8.32□□□□□ -1.08
PRPF8-212ENST00000575116 IGLV2-18A0A075B6J9 118 aa8.31□□□□□ -1.08
PRPF8-212ENST00000575116 A0A0J9YY99 117 aa8.31□□□□□ -1.08
PRPF8-212ENST00000575116 LOC100131303A0A0U1RQF7 123 aa8.31□□□□□ -1.08
PRPF8-212ENST00000575116 LOC389332A0A1B0GUA5 103 aa8.31□□□□□ -1.08
PRPF8-212ENST00000575116 I3L3M4 83 aa8.31□□□□□ -1.08
PRPF8-212ENST00000575116 LINC00614P0C842 121 aa8.31□□□□□ -1.08
PRPF8-212ENST00000575116 IFI27P40305 119 aaPredicted RBP8.31□□□□□ -1.08
PRPF8-212ENST00000575116 IQCJQ1A5X6 159 aa8.31□□□□□ -1.08
PRPF8-212ENST00000575116 NIT1Q86X76 327 aa8.31□□□□□ -1.08
PRPF8-212ENST00000575116 BAGE3Q86Y29 109 aa8.31□□□□□ -1.08
PRPF8-212ENST00000575116 KIR2DL4Q99706 377 aa8.31□□□□□ -1.08
PRPF8-212ENST00000575116 ICOSQ9Y6W8 199 aa8.31□□□□□ -1.08
PRPF8-212ENST00000575116 HUWE1Q7Z6Z7 4374 aaKnown RBP8.31□□□□□ -1.08
PRPF8-212ENST00000575116 DNAH9Q9NYC9 4486 aa8.3□□□□□ -1.08
PRPF8-212ENST00000575116 TMEM97Q5BJF2 176 aa8.3□□□□□ -1.08
PRPF8-212ENST00000575116 COA6Q5JTJ3 125 aaKnown RBP8.3□□□□□ -1.08
PRPF8-212ENST00000575116 C15orf53Q8NAA6 179 aa8.3□□□□□ -1.08
PRPF8-212ENST00000575116 ATP6V0E2Q8NHE4 81 aa8.3□□□□□ -1.08
PRPF8-212ENST00000575116 CHCHD1Q96BP2 118 aaKnown RBP8.3□□□□□ -1.08
PRPF8-212ENST00000575116 COL7A1Q02388 2944 aa8.29□□□□□ -1.08
PRPF8-212ENST00000575116 NDUFA6P56556 154 aa8.29□□□□□ -1.08
PRPF8-212ENST00000575116 FA2HQ7L5A8 372 aa8.29□□□□□ -1.08
PRPF8-212ENST00000575116 GTSF1LQ9H1H1 148 aa8.29□□□□□ -1.08
PRPF8-212ENST00000575116 A0A096LPF7 62 aa8.28□□□□□ -1.08
PRPF8-212ENST00000575116 NUPR2A6NF83 97 aa8.28□□□□□ -1.08
PRPF8-212ENST00000575116 G0S2P27469 103 aa8.28□□□□□ -1.08
PRPF8-212ENST00000575116 COTL1Q14019 142 aa8.28□□□□□ -1.08
PRPF8-212ENST00000575116 CEMP1Q6PRD7 247 aaPredicted RBP8.28□□□□□ -1.08
PRPF8-212ENST00000575116 NEGR1Q7Z3B1 354 aa8.28□□□□□ -1.08
PRPF8-212ENST00000575116 URB1-AS1Q96HZ7 61 aa8.28□□□□□ -1.08
PRPF8-212ENST00000575116 AP5S1Q9NUS5 200 aa8.28□□□□□ -1.08
PRPF8-212ENST00000575116 SERF1AO75920 110 aa8.27□□□□□ -1.09
PRPF8-212ENST00000575116 TSHBP01222 138 aa8.27□□□□□ -1.09
PRPF8-212ENST00000575116 S100A6P06703 90 aa8.27□□□□□ -1.09
PRPF8-212ENST00000575116 ESDP10768 282 aa8.27□□□□□ -1.09
PRPF8-212ENST00000575116 FCER1GP30273 86 aa8.27□□□□□ -1.09
PRPF8-212ENST00000575116 TIRAPP58753 221 aa8.27□□□□□ -1.09
PRPF8-212ENST00000575116 LAGE3Q14657 143 aa8.27□□□□□ -1.09
PRPF8-212ENST00000575116 ORMDL2Q53FV1 153 aa8.27□□□□□ -1.09
PRPF8-212ENST00000575116 IGHV3-38A0A0C4DH36 116 aa8.26□□□□□ -1.09
PRPF8-212ENST00000575116 LINC01549A6NIU2 74 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms