RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.26□□□□□ -0.61
MAP1LC3B-208ENST00000570189 BIN3Q9NQY0 253 aa11.26□□□□□ -0.61
MAP1LC3B-208ENST00000570189 KLK12Q9UKR0 248 aa11.26□□□□□ -0.61
MAP1LC3B-208ENST00000570189 TRBV20OR9-2A0A075B6H5 130 aa11.25□□□□□ -0.61
MAP1LC3B-208ENST00000570189 SMIM17P0DL12 118 aa11.25□□□□□ -0.61
MAP1LC3B-208ENST00000570189 GNG4P50150 75 aa11.25□□□□□ -0.61
MAP1LC3B-208ENST00000570189 CACNG7P62955 275 aa11.25□□□□□ -0.61
MAP1LC3B-208ENST00000570189 Q8N976 141 aa11.25□□□□□ -0.61
MAP1LC3B-208ENST00000570189 FER1L6-AS1Q8NA97 138 aa11.25□□□□□ -0.61
MAP1LC3B-208ENST00000570189 SRRM2Q9UQ35 2752 aaKnown RBP11.24□□□□□ -0.61
MAP1LC3B-208ENST00000570189 XKRY2A2RUG3 117 aa11.24□□□□□ -0.61
MAP1LC3B-208ENST00000570189 F2Z2F3 143 aa11.24□□□□□ -0.61
MAP1LC3B-208ENST00000570189 Q6ZNX1 250 aa11.24□□□□□ -0.61
MAP1LC3B-208ENST00000570189 DAZAP1Q96EP5 407 aaKnown RBP11.24□□□□□ -0.61
MAP1LC3B-208ENST00000570189 IGKV2D-24A0A075B6R9 120 aa11.23□□□□□ -0.61
MAP1LC3B-208ENST00000570189 MUC21A0A0G2JKD1 596 aa11.23□□□□□ -0.61
MAP1LC3B-208ENST00000570189 MUC21A0A140T8X8 626 aa11.23□□□□□ -0.61
MAP1LC3B-208ENST00000570189 OR2D3Q8NGH3 330 aa11.23□□□□□ -0.61
MAP1LC3B-208ENST00000570189 UBE2WQ96B02 151 aa11.23□□□□□ -0.61
MAP1LC3B-208ENST00000570189 DNAJC30Q96LL9 226 aa11.23□□□□□ -0.61
MAP1LC3B-208ENST00000570189 FAM30AQ9NZY2 134 aa11.23□□□□□ -0.61
MAP1LC3B-208ENST00000570189 RAB19A4D1S5 217 aa11.22□□□□□ -0.61
MAP1LC3B-208ENST00000570189 F5H697 171 aa11.22□□□□□ -0.61
MAP1LC3B-208ENST00000570189 H7C1H1 209 aa11.22□□□□□ -0.61
MAP1LC3B-208ENST00000570189 M0QY20 66 aa11.22□□□□□ -0.61
MAP1LC3B-208ENST00000570189 P01737 135 aa11.22□□□□□ -0.61
MAP1LC3B-208ENST00000570189 INAFM2P0DMQ5 153 aa11.22□□□□□ -0.61
MAP1LC3B-208ENST00000570189 MPV17L2Q567V2 206 aa11.22□□□□□ -0.61
MAP1LC3B-208ENST00000570189 WDR73Q6P4I2 378 aa11.22□□□□□ -0.61
MAP1LC3B-208ENST00000570189 ENHOQ6UWT2 76 aa11.22□□□□□ -0.61
MAP1LC3B-208ENST00000570189 NTM-AS1Q6ZSK4 140 aa11.22□□□□□ -0.61
MAP1LC3B-208ENST00000570189 BAALCQ8WXS3 180 aa11.22□□□□□ -0.61
MAP1LC3B-208ENST00000570189 CNFNQ9BYD5 112 aa11.22□□□□□ -0.61
MAP1LC3B-208ENST00000570189 MED9Q9NWA0 146 aa11.22□□□□□ -0.61
MAP1LC3B-208ENST00000570189 FAM229AH3BQW9 127 aa11.21□□□□□ -0.61
MAP1LC3B-208ENST00000570189 IQCJQ1A5X6 159 aa11.21□□□□□ -0.61
MAP1LC3B-208ENST00000570189 PRR34Q9NV39 138 aa11.21□□□□□ -0.61
MAP1LC3B-208ENST00000570189 LECT2O14960 151 aa11.2□□□□□ -0.62
MAP1LC3B-208ENST00000570189 SMR3BP02814 79 aaPredicted RBP11.2□□□□□ -0.62
MAP1LC3B-208ENST00000570189 GZMBP10144 247 aa11.2□□□□□ -0.62
MAP1LC3B-208ENST00000570189 CTRLP40313 264 aa11.2□□□□□ -0.62
MAP1LC3B-208ENST00000570189 MIAQ16674 131 aa11.2□□□□□ -0.62
MAP1LC3B-208ENST00000570189 C9orf62Q8N4C0 152 aa11.2□□□□□ -0.62
MAP1LC3B-208ENST00000570189 C1orf43Q9BWL3 253 aa11.2□□□□□ -0.62
MAP1LC3B-208ENST00000570189 TRBV25-1A0A075B6N4 114 aa11.19□□□□□ -0.62
MAP1LC3B-208ENST00000570189 TMEM262E9PQX1 116 aa11.19□□□□□ -0.62
MAP1LC3B-208ENST00000570189 CRPP02741 224 aa11.19□□□□□ -0.62
MAP1LC3B-208ENST00000570189 TRGC1P0CF51 173 aa11.19□□□□□ -0.62
MAP1LC3B-208ENST00000570189 C14orf177Q52M58 125 aa11.19□□□□□ -0.62
MAP1LC3B-208ENST00000570189 CHCHD5Q9BSY4 110 aa11.19□□□□□ -0.62
MAP1LC3B-208ENST00000570189 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.18□□□□□ -0.62
MAP1LC3B-208ENST00000570189 SUMO4Q6EEV6 95 aa11.18□□□□□ -0.62
MAP1LC3B-208ENST00000570189 LYZL1Q6UWQ5 148 aa11.18□□□□□ -0.62
MAP1LC3B-208ENST00000570189 C15orf54Q8N8G6 183 aa11.18□□□□□ -0.62
MAP1LC3B-208ENST00000570189 LYPD6BQ8NI32 183 aa11.18□□□□□ -0.62
MAP1LC3B-208ENST00000570189 PGLYRP4Q96LB8 373 aa11.18□□□□□ -0.62
MAP1LC3B-208ENST00000570189 MYCBP2O75592 4640 aa11.18□□□□□ -0.62
MAP1LC3B-208ENST00000570189 TMEM250H0YL14 139 aa11.17□□□□□ -0.62
MAP1LC3B-208ENST00000570189 ANGP03950 147 aaKnown RBP11.17□□□□□ -0.62
MAP1LC3B-208ENST00000570189 NUDT10Q8NFP7 164 aa11.17□□□□□ -0.62
MAP1LC3B-208ENST00000570189 NUDT11Q96G61 164 aa11.17□□□□□ -0.62
MAP1LC3B-208ENST00000570189 TPPP3Q9BW30 176 aa11.17□□□□□ -0.62
MAP1LC3B-208ENST00000570189 DPH3P1Q9H4G8 78 aa11.17□□□□□ -0.62
MAP1LC3B-208ENST00000570189 DMBT1Q9UGM3 2413 aaPredicted RBP11.16□□□□□ -0.62
MAP1LC3B-208ENST00000570189 IGHV1-24A0A0C4DH33 117 aa11.16□□□□□ -0.62
MAP1LC3B-208ENST00000570189 NDUFS6O75380 124 aaKnown RBP11.16□□□□□ -0.62
MAP1LC3B-208ENST00000570189 NTF3P20783 257 aa11.16□□□□□ -0.62
MAP1LC3B-208ENST00000570189 SSTP61278 116 aa11.16□□□□□ -0.62
MAP1LC3B-208ENST00000570189 RBX1P62877 108 aa11.16□□□□□ -0.62
MAP1LC3B-208ENST00000570189 HAMPP81172 84 aa11.16□□□□□ -0.62
MAP1LC3B-208ENST00000570189 RASL11AQ6T310 242 aa11.16□□□□□ -0.62
MAP1LC3B-208ENST00000570189 AKAP14Q86UN6 197 aa11.16□□□□□ -0.62
MAP1LC3B-208ENST00000570189 HERC1Q15751 4861 aa11.15□□□□□ -0.62
MAP1LC3B-208ENST00000570189 A0A1B0GUV1 79 aa11.15□□□□□ -0.62
MAP1LC3B-208ENST00000570189 K7EN84 100 aa11.15□□□□□ -0.62
MAP1LC3B-208ENST00000570189 MGPP08493 103 aa11.15□□□□□ -0.62
MAP1LC3B-208ENST00000570189 BLOC1S1P78537 153 aa11.15□□□□□ -0.62
MAP1LC3B-208ENST00000570189 NIT2Q9NQR4 276 aa11.15□□□□□ -0.62
MAP1LC3B-208ENST00000570189 KRTAP26-1Q6PEX3 210 aa11.14□□□□□ -0.63
MAP1LC3B-208ENST00000570189 OCC1Q8TAD7 63 aa11.14□□□□□ -0.63
MAP1LC3B-208ENST00000570189 RPP21Q9H633 154 aaKnown RBP11.14□□□□□ -0.63
MAP1LC3B-208ENST00000570189 FLG2Q5D862 2391 aaPredicted RBP11.14□□□□□ -0.63
MAP1LC3B-208ENST00000570189 FAM231DQ6ZW35 169 aa11.13□□□□□ -0.63
MAP1LC3B-208ENST00000570189 PLA2G1BP04054 148 aaKnown RBP11.12□□□□□ -0.63
MAP1LC3B-208ENST00000570189 CHAC1Q9BUX1 264 aa11.12□□□□□ -0.63
MAP1LC3B-208ENST00000570189 NKX2-5P52952 324 aaPredicted RBP11.11□□□□□ -0.63
MAP1LC3B-208ENST00000570189 GAGE6Q13070 117 aa11.11□□□□□ -0.63
MAP1LC3B-208ENST00000570189 DGAT2L7PQ6IED9 249 aa11.11□□□□□ -0.63
MAP1LC3B-208ENST00000570189 SCXQ7RTU7 201 aa11.11□□□□□ -0.63
MAP1LC3B-208ENST00000570189 LINC00269Q8N2A0 174 aa11.11□□□□□ -0.63
MAP1LC3B-208ENST00000570189 TMEM243Q9BU79 118 aa11.11□□□□□ -0.63
MAP1LC3B-208ENST00000570189 RNASE7Q9H1E1 156 aaKnown RBP11.11□□□□□ -0.63
MAP1LC3B-208ENST00000570189 TRAV8-4A0A0B4J246 113 aa11.1□□□□□ -0.63
MAP1LC3B-208ENST00000570189 USP17L23D6RBM5 183 aa11.1□□□□□ -0.63
MAP1LC3B-208ENST00000570189 LINC01620Q4KN68 170 aa11.1□□□□□ -0.63
MAP1LC3B-208ENST00000570189 CT83Q5H943 113 aa11.1□□□□□ -0.63
MAP1LC3B-208ENST00000570189 ALKAL2Q6UX46 152 aa11.1□□□□□ -0.63
MAP1LC3B-208ENST00000570189 LINC00528Q8N1L1 170 aa11.1□□□□□ -0.63
MAP1LC3B-208ENST00000570189 C20orf203Q8NBC4 194 aa11.1□□□□□ -0.63
MAP1LC3B-208ENST00000570189 GTSF1Q8WW33 167 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms