RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 F5H697 171 aa12.36□□□□□ -0.43
SPSB3-210ENST00000568416 IGLV2-8P01709 118 aa12.36□□□□□ -0.43
SPSB3-210ENST00000568416 SSTP61278 116 aa12.36□□□□□ -0.43
SPSB3-210ENST00000568416 LINC00528Q8N1L1 170 aa12.36□□□□□ -0.43
SPSB3-210ENST00000568416 C1orf43Q9BWL3 253 aa12.36□□□□□ -0.43
SPSB3-210ENST00000568416 MYCBP2O75592 4640 aa12.36□□□□□ -0.43
SPSB3-210ENST00000568416 PLA2G1BP04054 148 aaKnown RBP12.35□□□□□ -0.43
SPSB3-210ENST00000568416 CENPWQ5EE01 88 aa12.35□□□□□ -0.43
SPSB3-210ENST00000568416 NTM-AS1Q6ZSK4 140 aa12.35□□□□□ -0.43
SPSB3-210ENST00000568416 SCXQ7RTU7 201 aa12.35□□□□□ -0.43
SPSB3-210ENST00000568416 C15orf54Q8N8G6 183 aa12.35□□□□□ -0.43
SPSB3-210ENST00000568416 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.35□□□□□ -0.43
SPSB3-210ENST00000568416 AP1S3Q96PC3 154 aa12.35□□□□□ -0.43
SPSB3-210ENST00000568416 CRPP02741 224 aa12.34□□□□□ -0.43
SPSB3-210ENST00000568416 IGLC6P0CF74 106 aa12.34□□□□□ -0.43
SPSB3-210ENST00000568416 SMIM17P0DL12 118 aa12.34□□□□□ -0.43
SPSB3-210ENST00000568416 RAB5CP51148 216 aa12.34□□□□□ -0.43
SPSB3-210ENST00000568416 PKIAP61925 76 aa12.34□□□□□ -0.43
SPSB3-210ENST00000568416 TMEM97Q5BJF2 176 aa12.34□□□□□ -0.43
SPSB3-210ENST00000568416 CHCHD5Q9BSY4 110 aa12.34□□□□□ -0.43
SPSB3-210ENST00000568416 C19orf71A6NCJ1 209 aa12.33□□□□□ -0.44
SPSB3-210ENST00000568416 ANGP03950 147 aaKnown RBP12.33□□□□□ -0.44
SPSB3-210ENST00000568416 GZMBP10144 247 aa12.33□□□□□ -0.44
SPSB3-210ENST00000568416 RPS20P60866 119 aaKnown RBP12.32□□□□□ -0.44
SPSB3-210ENST00000568416 C14orf177Q52M58 125 aa12.32□□□□□ -0.44
SPSB3-210ENST00000568416 FER1L6-AS1Q8NA97 138 aa12.32□□□□□ -0.44
SPSB3-210ENST00000568416 SMIM12Q96EX1 92 aa12.32□□□□□ -0.44
SPSB3-210ENST00000568416 RAB19A4D1S5 217 aa12.31□□□□□ -0.44
SPSB3-210ENST00000568416 SULT1A2P50226 295 aa12.31□□□□□ -0.44
SPSB3-210ENST00000568416 MIAQ16674 131 aa12.31□□□□□ -0.44
SPSB3-210ENST00000568416 EIF5AL1Q6IS14 154 aaKnown RBP12.31□□□□□ -0.44
SPSB3-210ENST00000568416 OR2D3Q8NGH3 330 aa12.31□□□□□ -0.44
SPSB3-210ENST00000568416 DAZAP1Q96EP5 407 aaKnown RBP12.31□□□□□ -0.44
SPSB3-210ENST00000568416 CHAC1Q9BUX1 264 aa12.31□□□□□ -0.44
SPSB3-210ENST00000568416 TEX46H3BTG2 121 aa12.3□□□□□ -0.44
SPSB3-210ENST00000568416 M0QY20 66 aa12.3□□□□□ -0.44
SPSB3-210ENST00000568416 TPPP3Q9BW30 176 aa12.3□□□□□ -0.44
SPSB3-210ENST00000568416 PRR34Q9NV39 138 aa12.3□□□□□ -0.44
SPSB3-210ENST00000568416 SRRM2Q9UQ35 2752 aaKnown RBP12.3□□□□□ -0.44
SPSB3-210ENST00000568416 TRBV25-1A0A075B6N4 114 aa12.29□□□□□ -0.44
SPSB3-210ENST00000568416 MGPP08493 103 aa12.29□□□□□ -0.44
SPSB3-210ENST00000568416 GNG4P50150 75 aa12.29□□□□□ -0.44
SPSB3-210ENST00000568416 RBX1P62877 108 aa12.29□□□□□ -0.44
SPSB3-210ENST00000568416 CACNG7P62955 275 aa12.29□□□□□ -0.44
SPSB3-210ENST00000568416 MEF2BQ02080 365 aaPredicted RBP12.29□□□□□ -0.44
SPSB3-210ENST00000568416 GAGE6Q13070 117 aa12.29□□□□□ -0.44
SPSB3-210ENST00000568416 IQCJQ1A5X6 159 aa12.29□□□□□ -0.44
SPSB3-210ENST00000568416 CIRBP-AS1Q8TBR5 109 aa12.29□□□□□ -0.44
SPSB3-210ENST00000568416 TRBV20OR9-2A0A075B6H5 130 aa12.28□□□□□ -0.44
SPSB3-210ENST00000568416 USP17L23D6RBM5 183 aa12.28□□□□□ -0.44
SPSB3-210ENST00000568416 PDE6DO43924 150 aa12.28□□□□□ -0.44
SPSB3-210ENST00000568416 SUMO4Q6EEV6 95 aa12.28□□□□□ -0.44
SPSB3-210ENST00000568416 KRTAP26-1Q6PEX3 210 aa12.28□□□□□ -0.44
SPSB3-210ENST00000568416 H7C1H1 209 aa12.27□□□□□ -0.45
SPSB3-210ENST00000568416 HLA-DQA1P01909 254 aa12.27□□□□□ -0.45
SPSB3-210ENST00000568416 KRTAP10-4P60372 401 aaPredicted RBP12.27□□□□□ -0.45
SPSB3-210ENST00000568416 DEFB104AQ8WTQ1 72 aa12.27□□□□□ -0.45
SPSB3-210ENST00000568416 MED9Q9NWA0 146 aa12.27□□□□□ -0.45
SPSB3-210ENST00000568416 IGHV1-24A0A0C4DH33 117 aa12.26□□□□□ -0.45
SPSB3-210ENST00000568416 XKRY2A2RUG3 117 aa12.26□□□□□ -0.45
SPSB3-210ENST00000568416 F2Z2F3 143 aa12.26□□□□□ -0.45
SPSB3-210ENST00000568416 IFNA1P01562 189 aa12.26□□□□□ -0.45
SPSB3-210ENST00000568416 P01737 135 aa12.26□□□□□ -0.45
SPSB3-210ENST00000568416 CLPSL2Q6UWE3 100 aa12.26□□□□□ -0.45
SPSB3-210ENST00000568416 LINC00269Q8N2A0 174 aa12.26□□□□□ -0.45
SPSB3-210ENST00000568416 DMBT1Q9UGM3 2413 aaPredicted RBP12.25□□□□□ -0.45
SPSB3-210ENST00000568416 KRTAP29-1A8MX34 341 aaPredicted RBP12.25□□□□□ -0.45
SPSB3-210ENST00000568416 J3QL48 77 aa12.25□□□□□ -0.45
SPSB3-210ENST00000568416 PRSS1P07477 247 aa12.25□□□□□ -0.45
SPSB3-210ENST00000568416 BCL2P10415 239 aa12.25□□□□□ -0.45
SPSB3-210ENST00000568416 LYZL1Q6UWQ5 148 aa12.25□□□□□ -0.45
SPSB3-210ENST00000568416 TCTE3Q8IZS6 198 aa12.25□□□□□ -0.45
SPSB3-210ENST00000568416 FLG2Q5D862 2391 aaPredicted RBP12.25□□□□□ -0.45
SPSB3-210ENST00000568416 TRGC1P0CF51 173 aa12.24□□□□□ -0.45
SPSB3-210ENST00000568416 NKX2-5P52952 324 aaPredicted RBP12.24□□□□□ -0.45
SPSB3-210ENST00000568416 RASL11AQ6T310 242 aa12.24□□□□□ -0.45
SPSB3-210ENST00000568416 BIN3Q9NQY0 253 aa12.24□□□□□ -0.45
SPSB3-210ENST00000568416 DGAT2L7PQ6IED9 249 aa12.23□□□□□ -0.45
SPSB3-210ENST00000568416 SLC51BQ86UW2 128 aa12.23□□□□□ -0.45
SPSB3-210ENST00000568416 C9orf62Q8N4C0 152 aa12.23□□□□□ -0.45
SPSB3-210ENST00000568416 C20orf203Q8NBC4 194 aa12.23□□□□□ -0.45
SPSB3-210ENST00000568416 NUDT10Q8NFP7 164 aa12.23□□□□□ -0.45
SPSB3-210ENST00000568416 NUDT11Q96G61 164 aa12.23□□□□□ -0.45
SPSB3-210ENST00000568416 DPH3P1Q9H4G8 78 aa12.23□□□□□ -0.45
SPSB3-210ENST00000568416 NTF3P20783 257 aa12.22□□□□□ -0.45
SPSB3-210ENST00000568416 REG3AQ06141 175 aa12.22□□□□□ -0.45
SPSB3-210ENST00000568416 WDR73Q6P4I2 378 aa12.22□□□□□ -0.45
SPSB3-210ENST00000568416 NIT2Q9NQR4 276 aa12.22□□□□□ -0.45
SPSB3-210ENST00000568416 CTRLP40313 264 aa12.21□□□□□ -0.45
SPSB3-210ENST00000568416 C9orf163Q8N9P6 203 aa12.21□□□□□ -0.45
SPSB3-210ENST00000568416 PGLYRP4Q96LB8 373 aa12.21□□□□□ -0.45
SPSB3-210ENST00000568416 TMEM243Q9BU79 118 aa12.21□□□□□ -0.45
SPSB3-210ENST00000568416 A0A1B0GUV1 79 aa12.2□□□□□ -0.46
SPSB3-210ENST00000568416 TAGLN2P37802 199 aaKnown RBP12.2□□□□□ -0.46
SPSB3-210ENST00000568416 CNFNQ9BYD5 112 aa12.2□□□□□ -0.46
SPSB3-210ENST00000568416 IGLV4-60A0A075B6I1 120 aa12.19□□□□□ -0.46
SPSB3-210ENST00000568416 IGLV10-54A0A075B6I4 117 aa12.18□□□□□ -0.46
SPSB3-210ENST00000568416 TRAV8-4A0A0B4J246 113 aa12.18□□□□□ -0.46
SPSB3-210ENST00000568416 K7EN84 100 aa12.18□□□□□ -0.46
SPSB3-210ENST00000568416 CLRN3Q8NCR9 226 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms