RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 NTF3P20783 257 aa16.9■□□□□ 0.3
FANCA-228ENST00000567943 CTRLP40313 264 aa16.9■□□□□ 0.3
FANCA-228ENST00000567943 KRTAP4-5Q9BYR2 181 aa16.9■□□□□ 0.3
FANCA-228ENST00000567943 A0A087WTM6 91 aa16.89■□□□□ 0.29
FANCA-228ENST00000567943 ZNF727A8MUV8 499 aa16.89■□□□□ 0.29
FANCA-228ENST00000567943 GATCO43716 136 aaKnown RBP16.89■□□□□ 0.29
FANCA-228ENST00000567943 ERVFC1-1P60608 527 aa16.89■□□□□ 0.29
FANCA-228ENST00000567943 Q9HAA7 133 aa16.89■□□□□ 0.29
FANCA-228ENST00000567943 TRGC1P0CF51 173 aa16.88■□□□□ 0.29
FANCA-228ENST00000567943 FAM231DQ6ZW35 169 aa16.88■□□□□ 0.29
FANCA-228ENST00000567943 WDR73Q6P4I2 378 aa16.87■□□□□ 0.29
FANCA-228ENST00000567943 LINC01551Q86U37 167 aa16.86■□□□□ 0.29
FANCA-228ENST00000567943 GTSF1Q8WW33 167 aa16.86■□□□□ 0.29
FANCA-228ENST00000567943 EREGO14944 169 aa16.85■□□□□ 0.29
FANCA-228ENST00000567943 TWIST1Q15672 202 aa16.85■□□□□ 0.29
FANCA-228ENST00000567943 SUMO4Q6EEV6 95 aa16.85■□□□□ 0.29
FANCA-228ENST00000567943 DAZ4Q86SG3 579 aaKnown RBP16.85■□□□□ 0.29
FANCA-228ENST00000567943 NIT1Q86X76 327 aa16.85■□□□□ 0.29
FANCA-228ENST00000567943 CNFNQ9BYD5 112 aa16.85■□□□□ 0.29
FANCA-228ENST00000567943 DPH3P1Q9H4G8 78 aa16.85■□□□□ 0.29
FANCA-228ENST00000567943 DAZ3Q9NR90 486 aaKnown RBP16.85■□□□□ 0.29
FANCA-228ENST00000567943 M0QY20 66 aa16.84■□□□□ 0.29
FANCA-228ENST00000567943 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.84■□□□□ 0.29
FANCA-228ENST00000567943 URGCP-MRPS24S4R325 110 aa16.84■□□□□ 0.29
FANCA-228ENST00000567943 TRBV6-8A0A0A6YYG3 113 aa16.83■□□□□ 0.28
FANCA-228ENST00000567943 A8MWL6 223 aa16.83■□□□□ 0.28
FANCA-228ENST00000567943 H7C1H1 209 aa16.83■□□□□ 0.28
FANCA-228ENST00000567943 PSCAO43653 123 aa16.83■□□□□ 0.28
FANCA-228ENST00000567943 LAGE3Q14657 143 aa16.83■□□□□ 0.28
FANCA-228ENST00000567943 PGPEP1Q9NXJ5 209 aa16.83■□□□□ 0.28
FANCA-228ENST00000567943 C9JQL5 133 aa16.82■□□□□ 0.28
FANCA-228ENST00000567943 LRCOL1A6NCL2 159 aa16.81■□□□□ 0.28
FANCA-228ENST00000567943 SRSF3P84103 164 aaKnown RBP16.81■□□□□ 0.28
FANCA-228ENST00000567943 CT83Q5H943 113 aa16.81■□□□□ 0.28
FANCA-228ENST00000567943 PGLYRP4Q96LB8 373 aa16.81■□□□□ 0.28
FANCA-228ENST00000567943 DNAJC30Q96LL9 226 aa16.81■□□□□ 0.28
FANCA-228ENST00000567943 PEA15Q15121 130 aa16.8■□□□□ 0.28
FANCA-228ENST00000567943 A0A087WX48 190 aa16.79■□□□□ 0.28
FANCA-228ENST00000567943 TMEM241Q24JQ0 296 aa16.79■□□□□ 0.28
FANCA-228ENST00000567943 FAM74A3Q4VXF1 159 aa16.79■□□□□ 0.28
FANCA-228ENST00000567943 RASL11AQ6T310 242 aa16.79■□□□□ 0.28
FANCA-228ENST00000567943 OSTCQ9NRP0 149 aa16.79■□□□□ 0.28
FANCA-228ENST00000567943 TRAV8-3A0A0A6YYJ7 113 aa16.78■□□□□ 0.28
FANCA-228ENST00000567943 TMEM262E9PQX1 116 aa16.78■□□□□ 0.28
FANCA-228ENST00000567943 KCNIP4Q6PIL6 250 aa16.78■□□□□ 0.28
FANCA-228ENST00000567943 DNAH8Q96JB1 4490 aa16.78■□□□□ 0.28
FANCA-228ENST00000567943 TMEM97Q5BJF2 176 aa16.77■□□□□ 0.28
FANCA-228ENST00000567943 CDPF1Q6NVV7 123 aa16.77■□□□□ 0.28
FANCA-228ENST00000567943 NTM-AS1Q6ZSK4 140 aa16.77■□□□□ 0.28
FANCA-228ENST00000567943 CHCHD7Q9BUK0 85 aa16.77■□□□□ 0.28
FANCA-228ENST00000567943 KLK12Q9UKR0 248 aa16.77■□□□□ 0.28
FANCA-228ENST00000567943 FOXA3P55318 350 aaPredicted RBP16.76■□□□□ 0.27
FANCA-228ENST00000567943 SMIM15Q7Z3B0 74 aa16.76■□□□□ 0.27
FANCA-228ENST00000567943 MAPKAPK5-AS1Q8N8E1 139 aa16.76■□□□□ 0.27
FANCA-228ENST00000567943 TSKUQ8WUA8 353 aa16.76■□□□□ 0.27
FANCA-228ENST00000567943 CHCHD5Q9BSY4 110 aa16.76■□□□□ 0.27
FANCA-228ENST00000567943 TM2D2Q9BX73 214 aa16.76■□□□□ 0.27
FANCA-228ENST00000567943 RPL23P62829 140 aaKnown RBP16.75■□□□□ 0.27
FANCA-228ENST00000567943 C15orf54Q8N8G6 183 aa16.75■□□□□ 0.27
FANCA-228ENST00000567943 ISOC2Q96AB3 205 aa16.75■□□□□ 0.27
FANCA-228ENST00000567943 SMDT1Q9H4I9 107 aa16.75■□□□□ 0.27
FANCA-228ENST00000567943 NIT2Q9NQR4 276 aa16.75■□□□□ 0.27
FANCA-228ENST00000567943 FAT1Q14517 4588 aa16.74■□□□□ 0.27
FANCA-228ENST00000567943 HIGD1CA8MV81 97 aa16.74■□□□□ 0.27
FANCA-228ENST00000567943 KRTAP10-1P60331 282 aa16.74■□□□□ 0.27
FANCA-228ENST00000567943 ELOBQ15370 118 aa16.74■□□□□ 0.27
FANCA-228ENST00000567943 ADIRFQ15847 76 aa16.74■□□□□ 0.27
FANCA-228ENST00000567943 BORCS7Q96B45 105 aa16.74■□□□□ 0.27
FANCA-228ENST00000567943 GFRA4Q9GZZ7 299 aa16.74■□□□□ 0.27
FANCA-228ENST00000567943 NAT8Q9UHE5 227 aa16.74■□□□□ 0.27
FANCA-228ENST00000567943 TRAV26-2A0A0B4J265 109 aa16.73■□□□□ 0.27
FANCA-228ENST00000567943 UBE2WQ96B02 151 aa16.73■□□□□ 0.27
FANCA-228ENST00000567943 V9GYV3 84 aa16.73■□□□□ 0.27
FANCA-228ENST00000567943 TRBV25-1A0A075B6N4 114 aa16.72■□□□□ 0.27
FANCA-228ENST00000567943 MPV17L2Q567V2 206 aa16.72■□□□□ 0.27
FANCA-228ENST00000567943 GATD1Q8NB37 220 aa16.72■□□□□ 0.27
FANCA-228ENST00000567943 FAM231BA6NCW3 169 aa16.71■□□□□ 0.27
FANCA-228ENST00000567943 IGHV1-24A0A0C4DH33 117 aa16.7■□□□□ 0.26
FANCA-228ENST00000567943 A0A1B0GUT8 65 aa16.7■□□□□ 0.26
FANCA-228ENST00000567943 PKIAP61925 76 aa16.7■□□□□ 0.26
FANCA-228ENST00000567943 WFDC2Q14508 124 aa16.7■□□□□ 0.26
FANCA-228ENST00000567943 Q8N1X5 172 aa16.7■□□□□ 0.26
FANCA-228ENST00000567943 XGP55808 180 aa16.69■□□□□ 0.26
FANCA-228ENST00000567943 GAGE6Q13070 117 aa16.69■□□□□ 0.26
FANCA-228ENST00000567943 IQCJQ1A5X6 159 aa16.69■□□□□ 0.26
FANCA-228ENST00000567943 DEFB104AQ8WTQ1 72 aa16.69■□□□□ 0.26
FANCA-228ENST00000567943 RMI2Q96E14 147 aa16.69■□□□□ 0.26
FANCA-228ENST00000567943 IGKV2D-24A0A075B6R9 120 aa16.68■□□□□ 0.26
FANCA-228ENST00000567943 RAB14P61106 215 aa16.68■□□□□ 0.26
FANCA-228ENST00000567943 ATRAIDQ6UW56 229 aa16.68■□□□□ 0.26
FANCA-228ENST00000567943 Q8N976 141 aa16.68■□□□□ 0.26
FANCA-228ENST00000567943 FRZBQ92765 325 aa16.68■□□□□ 0.26
FANCA-228ENST00000567943 ANGP03950 147 aaKnown RBP16.67■□□□□ 0.26
FANCA-228ENST00000567943 Q8N814 137 aa16.67■□□□□ 0.26
FANCA-228ENST00000567943 RPL39LQ96EH5 51 aaKnown RBP16.67■□□□□ 0.26
FANCA-228ENST00000567943 COX11Q9Y6N1 276 aa16.67■□□□□ 0.26
FANCA-228ENST00000567943 NUP35Q8NFH5 326 aa16.66■□□□□ 0.26
FANCA-228ENST00000567943 CRPP02741 224 aa16.65■□□□□ 0.26
FANCA-228ENST00000567943 RBX1P62877 108 aa16.65■□□□□ 0.26
FANCA-228ENST00000567943 Q0VG73 95 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms