RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 RS1O15537 224 aa12.66□□□□□ -0.38
HERC2-208ENST00000566635 FAM19A2Q8N3H0 131 aa12.66□□□□□ -0.38
HERC2-208ENST00000566635 PRSS3P2Q8NHM4 247 aa12.66□□□□□ -0.38
HERC2-208ENST00000566635 OVOL2Q9BRP0 275 aa12.66□□□□□ -0.38
HERC2-208ENST00000566635 DNHD1Q96M86 4753 aa12.66□□□□□ -0.38
HERC2-208ENST00000566635 GAGE12BA1L429 117 aa12.65□□□□□ -0.38
HERC2-208ENST00000566635 GAGE7O76087 117 aa12.65□□□□□ -0.38
HERC2-208ENST00000566635 GAGE12FP0CL80 117 aa12.65□□□□□ -0.38
HERC2-208ENST00000566635 GAGE12GP0CL81 117 aa12.65□□□□□ -0.38
HERC2-208ENST00000566635 GAGE12IP0CL82 117 aa12.65□□□□□ -0.38
HERC2-208ENST00000566635 RIPPLY3P57055 190 aa12.65□□□□□ -0.38
HERC2-208ENST00000566635 LGALS9BQ3B8N2 356 aa12.65□□□□□ -0.38
HERC2-208ENST00000566635 Q6ZWC4 215 aa12.65□□□□□ -0.38
HERC2-208ENST00000566635 RNF183Q96D59 192 aa12.65□□□□□ -0.38
HERC2-208ENST00000566635 SMIM9A6NGZ8 99 aa12.65□□□□□ -0.38
HERC2-208ENST00000566635 HSBP1O75506 76 aa12.65□□□□□ -0.38
HERC2-208ENST00000566635 PMCHL1Q16048 86 aa12.65□□□□□ -0.38
HERC2-208ENST00000566635 DEFB4AO15263 64 aa12.64□□□□□ -0.39
HERC2-208ENST00000566635 IGHV3-53P01767 116 aa12.64□□□□□ -0.39
HERC2-208ENST00000566635 Q6ZSN1 163 aa12.64□□□□□ -0.39
HERC2-208ENST00000566635 RETNQ9HD89 108 aa12.64□□□□□ -0.39
HERC2-208ENST00000566635 M0QY20 66 aa12.64□□□□□ -0.39
HERC2-208ENST00000566635 FA2HQ7L5A8 372 aa12.64□□□□□ -0.39
HERC2-208ENST00000566635 CHCHD1Q96BP2 118 aaKnown RBP12.64□□□□□ -0.39
HERC2-208ENST00000566635 IGHV4-28A0A0C4DH34 117 aa12.63□□□□□ -0.39
HERC2-208ENST00000566635 AMTP48728 403 aa12.63□□□□□ -0.39
HERC2-208ENST00000566635 KPRPQ5T749 579 aaPredicted RBP12.63□□□□□ -0.39
HERC2-208ENST00000566635 OR4C5Q8NGB2 326 aa12.63□□□□□ -0.39
HERC2-208ENST00000566635 ZNF479Q96JC4 524 aa12.63□□□□□ -0.39
HERC2-208ENST00000566635 COL5A1-AS1Q5SY13 56 aa12.62□□□□□ -0.39
HERC2-208ENST00000566635 IGLV2-18A0A075B6J9 118 aa12.62□□□□□ -0.39
HERC2-208ENST00000566635 IGHV1-24A0A0C4DH33 117 aa12.62□□□□□ -0.39
HERC2-208ENST00000566635 RHODO00212 210 aa12.62□□□□□ -0.39
HERC2-208ENST00000566635 P0DMU3 169 aa12.62□□□□□ -0.39
HERC2-208ENST00000566635 FAM231AP0DMU4 169 aa12.62□□□□□ -0.39
HERC2-208ENST00000566635 FAM231CP0DMU5 169 aa12.62□□□□□ -0.39
HERC2-208ENST00000566635 SUMO2P61956 95 aaKnown RBP12.62□□□□□ -0.39
HERC2-208ENST00000566635 Q8NAQ8 132 aa12.62□□□□□ -0.39
HERC2-208ENST00000566635 AP5S1Q9NUS5 200 aa12.62□□□□□ -0.39
HERC2-208ENST00000566635 K7EIL1 84 aa12.61□□□□□ -0.39
HERC2-208ENST00000566635 TRGV2A0A075B6R0 118 aa12.61□□□□□ -0.39
HERC2-208ENST00000566635 TRAV4A0A0B4J268 109 aa12.61□□□□□ -0.39
HERC2-208ENST00000566635 NEGR1Q7Z3B1 354 aa12.61□□□□□ -0.39
HERC2-208ENST00000566635 SMIM2Q9BVW6 85 aa12.61□□□□□ -0.39
HERC2-208ENST00000566635 PRSS47A8MTI9 375 aa12.6□□□□□ -0.39
HERC2-208ENST00000566635 C21orf62-AS1Q17RA5 79 aa12.6□□□□□ -0.39
HERC2-208ENST00000566635 ZFP2Q6ZN57 461 aa12.6□□□□□ -0.39
HERC2-208ENST00000566635 Q8N8P6 123 aa12.6□□□□□ -0.39
HERC2-208ENST00000566635 VAMP8Q9BV40 100 aa12.6□□□□□ -0.39
HERC2-208ENST00000566635 MIFP14174 115 aa12.59□□□□□ -0.39
HERC2-208ENST00000566635 C20orf78Q9BR46 151 aa12.59□□□□□ -0.39
HERC2-208ENST00000566635 NXT2Q9NPJ8 142 aaKnown RBP12.59□□□□□ -0.39
HERC2-208ENST00000566635 Q9UF83 564 aa12.59□□□□□ -0.39
HERC2-208ENST00000566635 PPP1R17O96001 155 aa12.59□□□□□ -0.39
HERC2-208ENST00000566635 DEFB130BP0DP73 79 aa12.59□□□□□ -0.39
HERC2-208ENST00000566635 DEFB130AP0DP74 79 aa12.59□□□□□ -0.39
HERC2-208ENST00000566635 FAM222AQ5U5X8 452 aa12.59□□□□□ -0.39
HERC2-208ENST00000566635 EDA2RQ9HAV5 297 aa12.59□□□□□ -0.39
HERC2-208ENST00000566635 ST20Q9HBF5 79 aa12.59□□□□□ -0.39
HERC2-208ENST00000566635 LINC00612Q8N6U2 182 aa12.58□□□□□ -0.4
HERC2-208ENST00000566635 A0A096LNJ9 63 aa12.58□□□□□ -0.4
HERC2-208ENST00000566635 DEFB104AQ8WTQ1 72 aa12.58□□□□□ -0.4
HERC2-208ENST00000566635 TMEM70Q9BUB7 260 aa12.58□□□□□ -0.4
HERC2-208ENST00000566635 H7C1H1 209 aa12.57□□□□□ -0.4
HERC2-208ENST00000566635 CELA1Q9UNI1 258 aa12.57□□□□□ -0.4
HERC2-208ENST00000566635 TRBV6-5A0A0K0K1A5 114 aa12.56□□□□□ -0.4
HERC2-208ENST00000566635 SDHAF1A6NFY7 115 aa12.56□□□□□ -0.4
HERC2-208ENST00000566635 LINC01546A6NGU7 62 aa12.56□□□□□ -0.4
HERC2-208ENST00000566635 TP53TG1Q9Y2A0 90 aa12.56□□□□□ -0.4
HERC2-208ENST00000566635 PAM16Q9Y3D7 125 aa12.56□□□□□ -0.4
HERC2-208ENST00000566635 POLR2KP53803 58 aaKnown RBP12.56□□□□□ -0.4
HERC2-208ENST00000566635 ORAOV1Q8WV07 137 aa12.56□□□□□ -0.4
HERC2-208ENST00000566635 DKK2Q9UBU2 259 aa12.56□□□□□ -0.4
HERC2-208ENST00000566635 SBSPONQ8IVN8 264 aa12.55□□□□□ -0.4
HERC2-208ENST00000566635 Q8N976 141 aa12.55□□□□□ -0.4
HERC2-208ENST00000566635 TENM3Q9P273 2699 aa12.55□□□□□ -0.4
HERC2-208ENST00000566635 LYRM9A8MSI8 78 aa12.55□□□□□ -0.4
HERC2-208ENST00000566635 LINC00173Q6ZV60 143 aa12.55□□□□□ -0.4
HERC2-208ENST00000566635 NEXN-AS1Q8NBZ9 246 aa12.55□□□□□ -0.4
HERC2-208ENST00000566635 DEFB121Q5J5C9 76 aa12.54□□□□□ -0.4
HERC2-208ENST00000566635 RBX1P62877 108 aa12.53□□□□□ -0.4
HERC2-208ENST00000566635 RPL32P62910 135 aaKnown RBP12.53□□□□□ -0.4
HERC2-208ENST00000566635 K7EQD1 137 aa12.53□□□□□ -0.4
HERC2-208ENST00000566635 LAGE3Q14657 143 aa12.53□□□□□ -0.4
HERC2-208ENST00000566635 SLC25A29Q8N8R3 303 aa12.53□□□□□ -0.4
HERC2-208ENST00000566635 TRGV4A0A0C4DH28 118 aa12.52□□□□□ -0.4
HERC2-208ENST00000566635 HBDP02042 147 aa12.52□□□□□ -0.4
HERC2-208ENST00000566635 FHL2Q14192 279 aa12.52□□□□□ -0.4
HERC2-208ENST00000566635 MRAPQ8TCY5 172 aa12.52□□□□□ -0.4
HERC2-208ENST00000566635 C18orf15Q96N68 181 aa12.52□□□□□ -0.4
HERC2-208ENST00000566635 UQCR10Q9UDW1 63 aa12.52□□□□□ -0.4
HERC2-208ENST00000566635 TRBV27A0A0K0K1C4 114 aa12.52□□□□□ -0.41
HERC2-208ENST00000566635 K7EP13 123 aa12.52□□□□□ -0.41
HERC2-208ENST00000566635 LEPROTL1O95214 131 aa12.52□□□□□ -0.41
HERC2-208ENST00000566635 TNFRSF18Q9Y5U5 241 aa12.52□□□□□ -0.41
HERC2-208ENST00000566635 C20orf202A1L168 122 aa12.51□□□□□ -0.41
HERC2-208ENST00000566635 VCYO14598 125 aa12.51□□□□□ -0.41
HERC2-208ENST00000566635 BATFQ16520 125 aa12.51□□□□□ -0.41
HERC2-208ENST00000566635 FCER1GP30273 86 aa12.5□□□□□ -0.41
HERC2-208ENST00000566635 KRTDAPP60985 99 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms